KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:54:00 2014 Check: 00 .. Name: ENSTTRP00000015386/1-565 Len: 768 Check: 5663 Weight: 1.00 Name: bmy_10938T0/1-514 Len: 768 Check: 5255 Weight: 1.00 Name: ENSP00000220420/1-720 Len: 768 Check: 8621 Weight: 1.00 Name: ENSBTAP00000042854/1-595 Len: 768 Check: 1745 Weight: 1.00 // 1 50 ENSTTRP00000015386/1-565 ---------- ---------- ---------- ---------- ---------- bmy_10938T0/1-514 ---------- ----SWNNVR HHTEEISSDR LLXRRGQAFN ITLYFRNQAF ENSP00000220420/1-720 MAQGLEVALT DLQSSRNNVR HHTEEITVDH LLVRRGQAFN LTLYFRNRSF ENSBTAP00000042854/1-595 MAEGLEVALT DLQSSWNNVQ HHTDEISSSR LLVRRGQAFN ITLYFRNRAF 51 100 ENSTTRP00000015386/1-565 ---------- ---------- ---------- ---------- ---------- bmy_10938T0/1-514 QPGLDNIIFL AETGPLPDLA KGTQAVFSLA GHRGPSPWIA SLETTGATSL ENSP00000220420/1-720 QPGLDNIIFV VETGPLPDLA LGTRAVFSLA RHHSPSPWIA WLETNGATST ENSBTAP00000042854/1-595 QPGLDNIIFV TETGPLPDLS KGTRAVFSLE GHPGSSPWIA SLQTIGANSL 101 150 ENSTTRP00000015386/1-565 ---------- ---------- ---------- ---------- ------DAVS bmy_10938T0/1-514 EVSLCTPPMA AVGQYILKVH IESLQGPVMA YQLGEFILLF NPLCSGDTVY ENSP00000220420/1-720 EVSLCAPPTA AVGRYLLKIH IDSFQGSVTA YQLGEFILLF NPWCPEDAVY ENSBTAP00000042854/1-595 EVSLCAPPMA AVGRYLLKVH IKSLQGPVTA YKLGEFILLF NPWCPEDAVY 151 200 ENSTTRP00000015386/1-565 LDGEPQRQEY VVNDYGF-YQ RNKNWICPCP WNYGQLEENI IDICLELLDK bmy_10938T0/1-514 LDSEPQRQEY VVNDYGF-LP REQELDLSLP LEL--WTENI IDICLELLDK ENSP00000220420/1-720 LDSEPQRQEY VMNDYGFIYQ GSKNWIRPCP WNYGQFEDKI IDICLKLLDK ENSBTAP00000042854/1-595 LESEPQRQEY VMNDYGFIYQ GNKNWIRPCP WNYGQFEENI IDICLELLDK 201 250 ENSTTRP00000015386/1-565 SLNFQIDPAT D-ALRGSPVH VSRVVCAMIN SNDDRGVLNG DRSENYADGI bmy_10938T0/1-514 SLNFQIDPAT DYALRGSPVH VSRVVCPMIN SNDDRGVLNG DWSENYSDGI ENSP00000220420/1-720 SLHFQTDPAT DCALRGSPVY VSRVVCAMIN SNDDNGVLNG NWSENYTDGA ENSBTAP00000042854/1-595 SLNFQIDPAT DCALRGSPVY ISRVVSAMIN SNDDNGVLNG NWGENYSDGT 251 300 ENSTTRP00000015386/1-565 NPVEWTGSVA ILKQWHATVC QPVCYGQCWV FAAVMCT--- ---------- bmy_10938T0/1-514 NPVEWTGSVA ILKQWHAIGC QPVCYGQCWV FAAVMCTGRE WKGPHGKIKN ENSP00000220420/1-720 NPAEWTGSVA ILKQWNATGC QPVRYGQCWV FAAVMCT--- ---------- ENSBTAP00000042854/1-595 NPTEWMGSVA ILKQWHATGC QPVRYGQCWV FAAVTCT--- ---------- 301 350 ENSTTRP00000015386/1-565 ---------- --------VM RCLGIPTQVI TNFDSGHDTD GNLIVDEYND bmy_10938T0/1-514 TMAHVATFWT ILVPEISHMM RCLGILTRVI TNVDSGHDTD GNLIIGEYCD ENSP00000220420/1-720 ---------- --------VM RCLGIPTRVI TNFDSGHDTD GNLIIDEYYD ENSBTAP00000042854/1-595 ---------- --------VM RCLGIPTRVI TNFNSGHDTD GNLIIDEYYD 351 400 ENSTTRP00000015386/1-565 NTGRTLESKK -DSVWNFHVW NECWMARNDL PPGYRGWQVL DATPQEMSN- bmy_10938T0/1-514 NTGRILESKK EDSVWNFHVC NECWMARNDL PPGYGGWQ-- SPLPQKQTHP ENSP00000220420/1-720 NTGRILGNKK KDTIWNFHVW NECWMARKDL PPAYGGWQVL DATPQEMSN- ENSBTAP00000042854/1-595 NTGRILENKK KDSVWNFHVW NECWMARNDL PPGFGGWQVL DATPQETSN- 401 450 ENSTTRP00000015386/1-565 ---------- ------SLYC YGPASIRAIK EGEVDLN-DT AFAFSMVNAD bmy_10938T0/1-514 TRPCSRSPLR PPCSPLGLYC CGPASVRAIK EGEVDLNYDP AFAFSMVNAD ENSP00000220420/1-720 ---------- ------GVYC CGPASVRAIK EGEVDLNYDT PFVFSMVNAD ENSBTAP00000042854/1-595 ---------- ------GLYC CGPASVRAIK EGEVDLNYDT AFAFSMVNAD 451 500 ENSTTRP00000015386/1-565 CMAWLVFGGK EQKLHLDTNS VGNFISTKRI QSDERDDVTE NCKYGEGSLQ bmy_10938T0/1-514 CAAWLVVGGK EQKLHLDANS VGNFISTKSI QSDERDDVTE NCKYGEGE-- ENSP00000220420/1-720 CMSWLVQGGK EQKLHQDTSS VGNFISTKSI QSDERDDITE NYKYEEGSLQ ENSBTAP00000042854/1-595 CMAWLVFGGK EQKLHQDTST VGNFISTKSI QSDERDDITE NYKYRE---- 501 550 ENSTTRP00000015386/1-565 ERQVILKALQ KLKPGRSQGS -----LQQTS RSMLPRDSPR SLATPSLRPS bmy_10938T0/1-514 ---------- ---------- ---------- ---------- ---------- ENSP00000220420/1-720 ERQVFLKALQ KLKARSFHGS QRGAELQPSR PTSLSQDSPR SLHTPSLRPS ENSBTAP00000042854/1-595 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000015386/1-565 DVVQVSLTFQ LLDPPDMGRD IRFVLLALNT APQFKDLKVN LSAQSLLHDG bmy_10938T0/1-514 ---------- ---------- ---------- ---------- ---------- ENSP00000220420/1-720 DVVQVSLKFK LLDPPNMGQD ICFVLLALNM SSQFKDLKVN LSAQSLLHDG ENSBTAP00000042854/1-595 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000015386/1-565 SPLPPFWQDT AFITLSPEEA KTYPCKIPYS QYGQYLSTDK LIRISALGEE bmy_10938T0/1-514 ---------- ---------- ---------- ---------- ----AGVSEG ENSP00000220420/1-720 SPLSPFWQDT AFITLSPKEA KTYPCKISYS QYSQYLSTDK LIRISALGEE ENSBTAP00000042854/1-595 ---------- ---------A KTYPCKITYS QYSQYLSTDK LIRISALGEE 651 700 ENSTTRP00000015386/1-565 KSSPEKTVVN KIITLACPGI MINXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_10938T0/1-514 SSEAEAWKVP R--------- ---------- ---------- ---------- ENSP00000220420/1-720 KSSPEKILVN KIITLSYPSI TINVLGAAVV NQPLSIQVIF SNPLSEQVED ENSBTAP00000042854/1-595 KNSPEKILVK KIITLAYPSI VINVLGAAIV NQPLSIQVVF SNPLSEQVED 701 750 ENSTTRP00000015386/1-565 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXSS bmy_10938T0/1-514 ---------- ---------- -LPPNRITNF QVHAAKGQS- ---------- ENSP00000220420/1-720 CVLTVEGSGL FKKQQKVFLG VLKPQHQASI ILETVPFKSG QRQIQANMRS ENSBTAP00000042854/1-595 CVLTVEGSGL FRRQQRVLIG VLKPHHRASL TLETIPFKSG QRQIQANLRS 751 800 ENSTTRP00000015386/1-565 NKFKDHKGYR NVYVDFGL bmy_10938T0/1-514 ---------- -------- ENSP00000220420/1-720 NKFKDIKGYR NVYVDFAL ENSBTAP00000042854/1-595 NKFKDIKGYT NVYIGL--