KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:03 2014 Check: 00 .. Name: ENSP00000369141/1-342 Len: 417 Check: 8931 Weight: 1.00 Name: ENSBTAP00000042890/1-356 Len: 417 Check: 1185 Weight: 1.00 Name: ENSTTRP00000006988/1-329 Len: 417 Check: 9733 Weight: 1.00 Name: bmy_19064T0/1-318 Len: 417 Check: 819 Weight: 1.00 Name: BACU006647/1-414 Len: 417 Check: 9599 Weight: 1.00 // 1 50 ENSP00000369141/1-342 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042890/1-356 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006988/1-329 ---------- ---------- ---------- ---------- ---------- bmy_19064T0/1-318 MLRKLVLFGI TAKIQTWTVA QYGSKWSWHF PIRASGETLS AGNHWLLSSL BACU006647/1-414 MLRKLVLFGI TAKIQTWTVA QYGSKWTWHF PIRASGETLS AGNHWLLSSL 51 100 ENSP00000369141/1-342 ---------- ---------- -----MMRVC WLVRQDSRHQ RIRLPHLEAV ENSBTAP00000042890/1-356 ---------- -RSNVSLSAS AVSRVMMRVC WLVRQDNRHQ RIKLPHLETV ENSTTRP00000006988/1-329 ---------- -RSNVSLSAS AVSRLMMRVC WLVRQDNRHQ RIKLPHLEAV bmy_19064T0/1-318 SRDVIPQRRK WRSNVSLSAS AVSRVMMRVC WLVRQDNRHQ RIKLPHLEAV BACU006647/1-414 SRDVIPQRRK WRSNVSLSAS AVSRVMMRVC WLVRQDNRHQ RIKLPHLEAV 101 150 ENSP00000369141/1-342 VIGRGPETKI TDKKCSRQQV QLKAECNKGY VKVKQVGVNP TSIDSVVIGK ENSBTAP00000042890/1-356 MVGRSPETKI ADKKCSRQQV QLKAECNKGY VKVKQVGVNP TSIDSVIIGK ENSTTRP00000006988/1-329 MVGRSPETKI TDKKCSRQQV QLKAECNKGY VKVKQVWVNP TSIDSLIIGK bmy_19064T0/1-318 MVGRSPETKI TDKKCSRQQV QLKAECNKGY VKVKQVGVNP TSIDSLIIGK BACU006647/1-414 MVGRSPETKI TDKKCSRQQV QLKAECNKGY VK---VGVNP TSIDSLIIGK 151 200 ENSP00000369141/1-342 DQEVKLQPGQ VLHMVNELYP YIVEFEEEAK NPGLETHRKR KRSGNSDSIE ENSBTAP00000042890/1-356 DQEVKLQPGQ VLYLVNELYP YIIEFEEETK SPGLESHRKR KRSGSSDPTE ENSTTRP00000006988/1-329 DQEVKLQPGQ VLHLVNELYP YIIEFEEETK NPGLETHRKR KRSGNSDSVE bmy_19064T0/1-318 DQEVKLQPGQ VLHLVNELYP YIIEFEEETK NPGLETHRKR KRSGNSDSVE BACU006647/1-414 DQEVKLQPGQ VLHLVNELYP YIIEFEEETK NPGLETHRKR KRSGNSDSVE 201 250 ENSP00000369141/1-342 RDAAQEAEAG TGLEPGSNSG QCSVPLKKGK DAPIKKESLG HWSQGLKISM ENSBTAP00000042890/1-356 RGADPEAEPS TGLEPGSNPH QCSVPPKKEK DASIKKESLG HWSQGLKISM ENSTTRP00000006988/1-329 RDAAQEAEAS TRLEPGNNSS QCSVPPKKEK DASTKKESLG HWSQGLKISM bmy_19064T0/1-318 RDAAQEAEPS TGLEPGSNPS QCSVPPKKEK DASTKKESLG HWSQGLKISM BACU006647/1-414 RDAAQEAEPS TGLEPGSNPS QCSVPPKKEK DASTKKESSG HWSQGLKISM 251 300 ENSP00000369141/1-342 QDPKMQVYKD EQVVVIKDKY PKARYHWLVL PWTSISSLKA VAREHLELLK ENSBTAP00000042890/1-356 EDPKMQVYKD EQVVVIKDKY PKARFHWLVL PWASISSLKA VTREHLELLR ENSTTRP00000006988/1-329 EDPKMQXXXX XXXXXXXXKY PKAR-HWLVL PWASISSLKA VTREHLELLR bmy_19064T0/1-318 EDPKMQ---- ---------- --ARHHWLVL PWASISSLKA VTGEHLELLR BACU006647/1-414 EDPKMQVYKD EQVVVIKDKY PKARHHWLVL PWASISSLKA VTGEHLELLR 301 350 ENSP00000369141/1-342 HMHTVGEKVI VDFAGSSKLR FRLGYHAIPS MSHVHLHVIS QDFDSPCLKN ENSBTAP00000042890/1-356 HMHAVGEKVI ADFAGSSKFR FRLGYHAIPS MSHVHLHVIS QDFDSPCLKN ENSTTRP00000006988/1-329 HMHTVGEKVI ADFAGSSKLR FRLGYHAIPS MSHVHLHVIS QDFDSPCLKN bmy_19064T0/1-318 HMHTVGEKVI ADFAGSSKLR FRLGYHAIPS MS-------- ---------- BACU006647/1-414 HMHTVGEKVI ADFAGSSKLR FRLGYHAIPS MSHVHLHVIS QDFDSPCLKN 351 400 ENSP00000369141/1-342 KKHWNSFNTE YFLESQAVIE MVQEAGRVTV RDGMPELLKL PLRCHECQQL ENSBTAP00000042890/1-356 KKHWNSFNTE YFLESQAVIE MVQEAGRVTV RDGMPELLKL PLRCHECQQL ENSTTRP00000006988/1-329 KKHWNSFNTE YFLESQAVIE -VQKAGRLTV QDGIV-LLEP PLR------- bmy_19064T0/1-318 ---------- ---------- ---------- ---------- ------CD-- BACU006647/1-414 KKHWNSFNTE YFLESQAVIE MVQEAGRVSV QDGMCELLKL PLRCHECQQL 401 450 ENSP00000369141/1-342 LPSIPQLKEH LRKHWTQ ENSBTAP00000042890/1-356 LPSIPQLKEH LRKHWSK ENSTTRP00000006988/1-329 ---------- ------- bmy_19064T0/1-318 ---------- ------- BACU006647/1-414 LPSVPQLKVH LRKHWPK