KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:04 2014 Check: 00 .. Name: ENSTTRP00000007045/1-937 Len: 1018 Check: 1505 Weight: 1.00 Name: bmy_15115T0/1-547 Len: 1018 Check: 1208 Weight: 1.00 Name: ENSP00000447006/1-1018 Len: 1018 Check: 3060 Weight: 1.00 Name: BACU002215/1-924 Len: 1018 Check: 509 Weight: 1.00 Name: ENSBTAP00000042896/1-1018 Len: 1018 Check: 4132 Weight: 1.00 // 1 50 ENSTTRP00000007045/1-937 MKMWLLVNHL VIVSFTTCLS EFTWHRRYGH GVSEEDKGFG PIFEEQPINT bmy_15115T0/1-547 ---------- ---------- -FTWHRRYGH GVSEEDKGFG PIFEEQPINT ENSP00000447006/1-1018 MKMWLLVSHL VIISITTCLA EFTWYRRYGH GVSEEDKGFG PIFEEQPINT BACU002215/1-924 ---------- ---------- ----HR---- ---------- ---------- ENSBTAP00000042896/1-1018 MKMWLLFSLL VIISFKTCLS EFTWHRRYGH GVSEEDKGFG PIFEEQPINT 51 100 ENSTTRP00000007045/1-937 IYPEESPEGK VSLNCRARAS PFPVYKWRMN NGDIDLTSDR YSMVGGNLVI bmy_15115T0/1-547 IYPEESPEGK VSLNCRARAS PFPVYKWRMN NGDIDLTSDR YSMVGGNLVI ENSP00000447006/1-1018 IYPEESLEGK VSLNCRARAS PFPVYKWRMN NGDVDLTSDR YSMVGGNLVI BACU002215/1-924 ---------- ---------- ------WRMN NGDIDLTSDR YSMVGGNLVI ENSBTAP00000042896/1-1018 IYPEESPEGK VSLNCRARAS PFPVYKWRMN NGDIDLTSDR YSMVGGNLVI 101 150 ENSTTRP00000007045/1-937 NNPDKQKDAG VYYCLASNNY GMVRSTEATL SFGYLDPFPP EERPEVRVKE bmy_15115T0/1-547 NNPDKQKDAG VYYCLASNNY GMVRSTEATL SFGY------ -----SRAMK ENSP00000447006/1-1018 NNPDKQKDAG IYYCLASNNY GMVRSTEATL SFGYLDPFPP EERPEVRVKE BACU002215/1-924 NNPDKQKDAG VYYCLASNNY GMVRSTEATL SFGYLDPFPP EERPEVRVKE ENSBTAP00000042896/1-1018 NNPDKQKDAG IYYCLASNNY GMVRSTEATL SFGYLDPFPP EERPEVRVKE 151 200 ENSTTRP00000007045/1-937 GKGMVLLCDP PYHFPDDLSY RWLLNEFPVF ITMDKRRFVS QTNGNLYIAN bmy_15115T0/1-547 KAGVGFFRD- -----DDLSY RWLLNEFPVF ITMDKRRFVS QTNGNLYIAN ENSP00000447006/1-1018 GKGMVLLCDP PYHFPDDLSY RWLLNEFPVF ITMDKRRFVS QTNGNLYIAN BACU002215/1-924 GKGMVLLCDP PYHFPDDLSY RWLLNEFPVF ITMDKRRFVS QTNGNLYIAN ENSBTAP00000042896/1-1018 GKGMVLLCDP PYHFPDDLSY RWLLNEFPVF ITMDKRRFVS QTNGNLYIAN 201 250 ENSTTRP00000007045/1-937 VEASDKGNYS CFVSSPSITK SVFSKFIPLI PLPERTTKPY PADIVVQFKD bmy_15115T0/1-547 VEASDKGNYS CFVSSPSITK SVFSRFIPLI PLPERTTKPY PADIVVQFKD ENSP00000447006/1-1018 VEASDKGNYS CFVSSPSITK SVFSKFIPLI PIPERTTKPY PADIVVQFKD BACU002215/1-924 VEASDKGNYS CFVSSPSITK SVFSKFIPLI PLPERTTKPY PADIVVQFKD ENSBTAP00000042896/1-1018 VEASDKGNYS CFVSSPSITK SVFSKFIPLI PLPERTTKPY PADIVVQFKD 251 300 ENSTTRP00000007045/1-937 IYALMGQNVT LECFALGNPV PDIRWRKVLE PMPSTAEIST SGAVLKIFNI bmy_15115T0/1-547 IYALMGQNVT LECFALGNPV PDIRWRKVLE PMPSTAEIST SGAVLKIFNI ENSP00000447006/1-1018 VYALMGQNVT LECFALGNPV PDIRWRKVLE PMPSTAEIST SGAVLKIFNI BACU002215/1-924 IYALMGQNVT LECFALGNPV PDIRWRKVLE PMPSTAEIST SGAVLKIFNI ENSBTAP00000042896/1-1018 VYALMGQNVT LECFALGNPV PDIRWRKVLE PMPSTAEIST SGAVLKIFNI 301 350 ENSTTRP00000007045/1-937 QLEDEGTYEC EAENIRGKDK HQARIYVQAF PEWVEHINDT EVDIGSDLYW bmy_15115T0/1-547 QLEDEGTYEC EAENIRGKDK HQARIYVQAF PEWVEHINDT EVDIGSDLYW ENSP00000447006/1-1018 QLEDEGIYEC EAENIRGKDK HQARIYVQAF PEWVEHINDT EVDIGSDLYW BACU002215/1-924 QLEDEGTYEC EAENIRGKDK HQARIYVQAF PEWVEHINDT EVDIGSDLYW ENSBTAP00000042896/1-1018 QLEDEGIYEC EAENNRGKDK HQARIYVQAF PEWVEHINDT EVDIGSDLYW 351 400 ENSTTRP00000007045/1-937 PCVATGKPIP SIRWLKNGYL YHRGELRLYD VTFENAGMYQ CIAENTHGAI bmy_15115T0/1-547 PCVATGKPIP TIRWLKNGYS YHRGELRLYD VTFENAGMYQ CIAENTHGAI ENSP00000447006/1-1018 PCVATGKPIP TIRWLKNGYA YHKGELRLYD VTFENAGMYQ CIAENTYGAI BACU002215/1-924 PCVATGKPIP TIRWLKNGYS YHRGELRLYD VTFENAGMYQ CIAENTHGAI ENSBTAP00000042896/1-1018 PCVATGKPIP TIRWLKNGYS YHRGELRLYD VTFENAGMYQ CIAENTHGAI 401 450 ENSTTRP00000007045/1-937 YANAELKILA LA-TF-MNXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15115T0/1-547 YANAELKILA LAPTFEMNPM KKKILAAKGG RVIIECKPKA APKPKFLWSK ENSP00000447006/1-1018 YANAELKILA LAPTFEMNPM KKKILAAKGG RVIIECKPKA APKPKFSWSK BACU002215/1-924 YANAELKILA LAPTFEMNPM KKKILAAKGG RVIIECKPKA APKPKFLWSK ENSBTAP00000042896/1-1018 YANAELKILA LAPTFEMNPM KKKILAAKGG RVIIECKPKA APKPTFLWSK 451 500 ENSTTRP00000007045/1-937 XXXXXXXXXX IVIWEDGSLE INNIT--NDG VYTCFVENNK GKANSTGTXX bmy_15115T0/1-547 GTERLVNSSR ILIWEDGSLE INNITRNDGG VYTCFVENNK GKANSTGTLV ENSP00000447006/1-1018 GTEWLVNSSR ILIWEDGSLE INNITRNDGG IYTCFAENNR GKANSTGTLV BACU002215/1-924 GTERLVNSSR IVIWEDGSLE INNITRNDGG IYTCFVENNK GKANSTGTLV ENSBTAP00000042896/1-1018 GTERLVNSSR ILIWEDGSLE INNITRSDGG VYTCFVENNK GKANSTGTLV 501 550 ENSTTRP00000007045/1-937 XXXPTRIILA PINADITVGE NATMQCAASF DPALDLTFVW SFNGYVIDFN bmy_15115T0/1-547 ITDPTRIILA PINADITVGE NATMQCAASF DPALDLTFVW SFNGYVIDFN ENSP00000447006/1-1018 ITDPTRIILA PINADITVGE NATMQCAASF DPALDLTFVW SFNGYVIDFN BACU002215/1-924 ITDPTRIILA PINADITVGE NATMQCAASF DPALDLTFVW SFNGYVIDFN ENSBTAP00000042896/1-1018 ITDPTRIILA PINADITVGE NATMQCAASF DPALDLTFVW SFNGYVIDFN 551 600 ENSTTRP00000007045/1-937 KENIHYQRNF MLDSNGELLI RNAQLKHAGR YTCTAQTIVD NSSASADLVV bmy_15115T0/1-547 KENIHYQRNF M--------- ---------- ---------- ---------- ENSP00000447006/1-1018 KENIHYQRNF MLDSNGELLI RNAQLKHAGR YTCTAQTIVD NSSASADLVV BACU002215/1-924 KENIHYQRNF MLDSNGELLI RNAQLKHAGR YTCTAQTIVD NSSASADLVV ENSBTAP00000042896/1-1018 KENIHYQRNF MLDSNGELLI RNAQLKHAGR YTCTAQTIVD NSSASADLVV 601 650 ENSTTRP00000007045/1-937 RGPPGPPGGL RIEDIRATSV GLTWSRGSDN HSPISKYTIQ TKTILSDDWK bmy_15115T0/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000447006/1-1018 RGPPGPPGGL RIEDIRATSV ALTWSRGSDN HSPISKYTIQ TKTILSDDWK BACU002215/1-924 RGPPGPPGGL RIEDIRATSV GLTWSRGSDN HSPISKYTIQ TKTILSDDWK ENSBTAP00000042896/1-1018 RGPPGPPGGL RIEDIRATSV ALTWSRGSDN HSPISKYTIQ TKTILSDDWK 651 700 ENSTTRP00000007045/1-937 DAKTDPPIIE GNMEAARAVD LIPWMEYEFR VLATNTLGIG EPSIPSSKIK bmy_15115T0/1-547 ---------- GYLE------ ---------- ---------- ---------- ENSP00000447006/1-1018 DAKTDPPIIE GNMEAARAVD LIPWMEYEFR VVATNTLGRG EPSIPSNRIK BACU002215/1-924 DAKTDPPIIE GNMEAARAVD LIPWMEYEFR VLATNTLGIG EPSIPSSKIK ENSBTAP00000042896/1-1018 DAKTDPPIIE GNMEAARAVD LIPWMEYEFR VVATNTLGIG EPSIPSNKIK 701 750 ENSTTRP00000007045/1-937 TDGAAPNVAP SDVGGGGGSN RELTITWAPL SREYHYGNNF GYIVAFKPFD bmy_15115T0/1-547 ---------- ---------- ---------- ----NYGSDI G--------- ENSP00000447006/1-1018 TDGAAPNVAP SDVGGGGGRN RELTITWAPL SREYHYGNNF GYIVAFKPFD BACU002215/1-924 TDGAAPNVAP SDVGGGGGSN RELTITWAPL SREYHYGNNF GYIVAFKPFD ENSBTAP00000042896/1-1018 TDGAAPNVAP SDVGGGGGSN RELTITWAPL SREYHYGNNF GYIVAFKPFD 751 800 ENSTTRP00000007045/1-937 GEEWKKVTVT NPDTGRYVHK DETMRPSTAF QVKVKAFNNK GDGPYSLTAV bmy_15115T0/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000447006/1-1018 GEEWKKVTVT NPDTGRYVHK DETMSPSTAF QVKVKAFNNK GDGPYSLVAV BACU002215/1-924 GEEWKKVTVT NPDTGRYVHK DETMRPSTAF QVKVKAFNNK GDGPYSLTAV ENSBTAP00000042896/1-1018 GEEWKKVTVT NPDTGRYVHK DETMRPSTAF QVKVKAFNNK GDGPYSLTAV 801 850 ENSTTRP00000007045/1-937 IHSAQDAPSE APTAVGVKVL SSSEISVHWE HVVEKIVESY QIRYWAVHDK bmy_15115T0/1-547 ---------- -----EIKVI ---------- ---------- ---------- ENSP00000447006/1-1018 INSAQDAPSE APTEVGVKVL SSSEISVHWE HVLEKIVESY QIRYWAAHDK BACU002215/1-924 IHSAQDAPSE APTAVGVKVL SSSEISVHWE HVVEKIVESY QIRYWAVHDK ENSBTAP00000042896/1-1018 IHSAQDAPSE APTAVGVKVL SSSEISVHWE HVVEKIVESY QIRYWASHDK 851 900 ENSTTRP00000007045/1-937 EAAAHRVQVT SQEYSARLEN LLPDTQYFME VRACNSAGCG PPSDMIETFT bmy_15115T0/1-547 ---------- ---------- ---------- -------GSG RNQNM----- ENSP00000447006/1-1018 EEAANRVQVT SQEYSARLEN LLPDTQYFIE VGACNSAGCG PPSDMIEAFT BACU002215/1-924 EAAAHRVQVT SQEYSARLEN LLPDTQYFME VRACNSAGCG PPSDMIETFT ENSBTAP00000042896/1-1018 EAAAHRVQVA SQEYSARLEN LLPDTQYFVE VRACNSAGCG PPSDMIETFT 901 950 ENSTTRP00000007045/1-937 KKAPPSQPPR IISSVRSGSR YIITWDHVVA LSNESTVTGY K--------- bmy_15115T0/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000447006/1-1018 KKAPPSQPPR IISSVRSGSR YIITWDHVVA LSNESTVTGY KVLYRPDGQH BACU002215/1-924 KKAPPSQPPR IISSIRSGSR YIITWDHVVA LSNESTVTGY KVLYRPDGQH ENSBTAP00000042896/1-1018 KKAPPSQPPR IISSVRSGSR YIITWDHVVA LSNESTVTGY KVLYRPDGQH 951 1000 ENSTTRP00000007045/1-937 ---------- ---------- ---------- ---------- ---------- bmy_15115T0/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000447006/1-1018 DGKLYSTHKH SIEVPIPRDG EYVVEVRAHS DGGDGVVSQV KISGAPTLSP BACU002215/1-924 DGKLYSTHKH SIEVPIPRDG EYVVEVRAHS DGGDGVVSQV KISGKPII-- ENSBTAP00000042896/1-1018 DGKLYSTHKH SIEVPIPRDG EYVVEVRAHS DGGDGVVSQV KISGASILSP 1001 1050 ENSTTRP00000007045/1-937 ---------- -------- bmy_15115T0/1-547 ---------- -------- ENSP00000447006/1-1018 SLLGLLLPAF GILVYLEF BACU002215/1-924 ---------- -------- ENSBTAP00000042896/1-1018 CLLGFLLPAL GILVYLEF