KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:10 2014 Check: 00 .. Name: bmy_17150T0/1-227 Len: 445 Check: 8146 Weight: 1.00 Name: ENSP00000381666/1-440 Len: 445 Check: 7483 Weight: 1.00 Name: ENSBTAP00000042909/1-440 Len: 445 Check: 4556 Weight: 1.00 Name: BACU002218/1-358 Len: 445 Check: 8928 Weight: 1.00 Name: ENSTTRP00000001288/1-366 Len: 445 Check: 1084 Weight: 1.00 // 1 50 bmy_17150T0/1-227 MRRYLRVVVL CLACGFCSLL YAFSQLAVSL EEGAGGGGGK PQAAAASWLA ENSP00000381666/1-440 MRRYLRVVVL CVACGFCSLL YAFSQLAVSL EEGTGGGGGK PQAAVASWLA ENSBTAP00000042909/1-440 MRRYLRVVVL CLACGFCSLL YAFSQLAVSL EEGAGGVGGK PQAAAASWLG BACU002218/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001288/1-366 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_17150T0/1-227 GGGRGAGRGA GSAGPTAHPG RSD------- ---------- ---------- ENSP00000381666/1-440 GGGRGAVRGA GVAGPAAHPG VSDRCKDFSL CYWNPYWMLP SDVCGMNCFW ENSBTAP00000042909/1-440 GDGRGAGRGV GSAGPAAHHG RSDRCKEFSL CYWNPYWMLP SDVCGMNCFW BACU002218/1-358 ---------- ---------- ---------- -------MLP SDVCGMNCFW ENSTTRP00000001288/1-366 ---------- ---------- ----CKDFSL CYWNPYWMLP SDVCGMNCFW 101 150 bmy_17150T0/1-227 ---------- ---------- ---------- ---------- ---------- ENSP00000381666/1-440 EAAFRYSLKI QPVEKMHLAV VACGERLEET MTMLKSAIIF SIKPLQFHIF ENSBTAP00000042909/1-440 EAAFRYGVKM QPVERVHLAV VACGERLEET VTMLKSALIF SIKPLQFHIF BACU002218/1-358 EAAFRYSLKM QPVERVHLAV VACGERLEET LTMLKSALIF SIKPLQFHIF ENSTTRP00000001288/1-366 EAAFRYSLKM QPVEEVHLAV VACGERLEET LTMLKSALIF SIKPLQFHIF 151 200 bmy_17150T0/1-227 SQDSVHKS-- ---------- -------RTT FQSQ------ ---------- ENSP00000381666/1-440 AEDQLHHSFK GRLDNWSFLQ TFNYTLYPIT FPSENAAEWK KLFKPCASQR ENSBTAP00000042909/1-440 AEDQLHDSFK GILDSWSFLQ TFNYSLYPIT FPSENAAEWK KLFKPCASQR BACU002218/1-358 AEDQLHDSFK GILNSWSFLQ TFNYSLYPIT FPSENAAEWK KLFKPCASQR ENSTTRP00000001288/1-366 AEDQLHDSFK GILNSWSFLQ TFNYSLYPIT FPSENAAEWK KLFKPCASQR 201 250 bmy_17150T0/1-227 ----LILKEV DSLLYVDTDI LFLRPVDDIW SLLKKFNSTQ IAAMAPEHEE ENSP00000381666/1-440 LFLPLILKEV DSLLYVDTDI LFLRPVDDIW SLLKKFNSTQ IAAMAPEHEE ENSBTAP00000042909/1-440 LFLPLILKEV DSLLYVDTDI LFLRPVDDIW ALLKKFNSTQ IAAMAPEHEE BACU002218/1-358 LFLPLILKEV DSLLYVDTDI LFLRPVDDIW SLLKKFNSTQ IAAMAPEHEE ENSTTRP00000001288/1-366 LFLPLILKEV DSLLYVDTDI LFLRPVDDIW SLLKKFNSTQ IAAMAPEHEE 251 300 bmy_17150T0/1-227 PRIGWYNRFA RHPYYGKTGV NSGVMLMNMT RMRRKYFKKA FLFFRVN--- ENSP00000381666/1-440 PRIGWYNRFA RHPYYGKTGV NSGVMLMNMT RMRRKYFKND MTTVRLQWGD ENSBTAP00000042909/1-440 PRIGWYNRFA RHPYYGKTGV NSGVMLMNMT RMRRKYFKND MTTVRLRWGD BACU002218/1-358 PRIGWYNRFA RHPYYGKTGV NSGVMLMNMT RMRRKYFKND MTTVRLRWGD ENSTTRP00000001288/1-366 PRIGWYNRFA RHPYYGKTGV NSGVMLMNMT RMRRKYFKND MTSVRLRWGD 301 350 bmy_17150T0/1-227 ---------- ---------- -GII-----D QIIAYMEAIA KKPK------ ENSP00000381666/1-440 ILMPLLKKYK LNITWGDQDL LNIVFFHNPE SLFVFPCQWN YRPDHCIYGS ENSBTAP00000042909/1-440 ILMPLLKKYK LNITWGDQDL LNIIFFHNPE SLFVFPCQWN YRPDHCIYGS BACU002218/1-358 ILMPLLKKYK LNITWGDQDL LNIIFFHNPE SLFVFPCQWN YRPDHCIYGS ENSTTRP00000001288/1-366 ILMPLLKKYK LNITWGDQDL LNIIFFHNPE SLFVFPCQWN YRPDHCIYGS 351 400 bmy_17150T0/1-227 -----KKESL FFM------- ---------- ---------- GTEVFTMMIS ENSP00000381666/1-440 NCQEAEEGGI FILHGNRGVY HDDKQPAFRA VYEALRNCSF EDDNIRSLLK ENSBTAP00000042909/1-440 NCQEAEEEGI FILHGNRGVY HDDKQPAFRA IYEALRNCSF EDDSIHSLLK BACU002218/1-358 NCQEAEEEGI FILHGNRGVY HDDKQPAFRA IYEALRNCSF EDDNIHSLLK ENSTTRP00000001288/1-366 NCQEAEEEGI FILHGNRGVY HDDKQPAFRA IYEALRNCSF EDDNIHSLLK 401 450 bmy_17150T0/1-227 NQRLEL---- ---------- FMKH------ ---------- ----- ENSP00000381666/1-440 PLELELQKTV HTYCGKIYKI FIKQLAKSVR DRYARSPKEK ----- ENSBTAP00000042909/1-440 PLELELQKTV HTYCGKIYKI FIKQLTKSIQ DRYDRPPKER ----- BACU002218/1-358 PLELELQKTV HTYCGKIYKI FIKQLTKSIQ DRYDRPPKES TVLTM ENSTTRP00000001288/1-366 PLELELQKTV HTYCGKIYKI FIKQLTKSIQ DRYDRPPKER -----