KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:12 2014 Check: 00 .. Name: ENSP00000416750/1-514 Len: 518 Check: 5023 Weight: 1.00 Name: ENSBTAP00000042938/1-486 Len: 518 Check: 4024 Weight: 1.00 Name: ENSTTRP00000015727/1-474 Len: 518 Check: 4858 Weight: 1.00 Name: bmy_18084T0/1-357 Len: 518 Check: 3246 Weight: 1.00 Name: BACU004468/1-516 Len: 518 Check: 6271 Weight: 1.00 // 1 50 ENSP00000416750/1-514 MADSGLDKKS TKCPDCSSAS QKDVLCVCSS KTRVPPVLVV EMSQTSSIGS ENSBTAP00000042938/1-486 MADSSCGKKS TKCPHCSSAS QKNALCICSC KTKLSPMSVV EMSQTSSTGS ENSTTRP00000015727/1-474 ---------- ---------- ---------- ---------- ---QTSSTGS bmy_18084T0/1-357 ---------- ---------- ------MYFV YVLLSPVSVV EMSQTSSIGS BACU004468/1-516 MADSSCGKKS TKCPNCSSAS QKNVLCVCSC KTKLSPVSVV EMSQTSSIGS 51 100 ENSP00000416750/1-514 AESLISLERK KEKNINRDIT SRKDLPSRTS NVERKASQQQ WGRGNFTEGK ENSBTAP00000042938/1-486 SEFIVSPEKR KEKGASKDVT SGKDSPSKSS NIERKPSQQQ WGRGNFTEGK ENSTTRP00000015727/1-474 SEFTVSPERK KERQASKDST SGKDLPSETS SVERKSSQQQ WGRGNFTEGK bmy_18084T0/1-357 SEFIFSPERK KERQASKDIT SGKDLPSKTS NVERKSSQQQ WGRGNFTEGK BACU004468/1-516 SEFIFSPERK KERQTSKDIT SGKDLPSKTS NVERKSSQQQ WGRGNFTEGK 101 150 ENSP00000416750/1-514 VPHIRIENGA AIEEIYTFGR ILGKGSFGIV IEATDKETET KWAIKKVNKE ENSBTAP00000042938/1-486 VPHIRMDNGA ALQEIYTFGR ILGQGSFGMV IEAIDKERET KWAIKKVNKE ENSTTRP00000015727/1-474 VPHIRMDNGA AIQEIYTFGR ILGKGSFGMV IEAIDKETET KWAIKRVSKE bmy_18084T0/1-357 VPHIRMDNGA AIQEIYTFGR ILGQGSFGMV IEAIDKETET KWAIKKVSKE BACU004468/1-516 VPHIRMDNGA AIQEIYTFGR ILGQGSFGMV IEAIDKETET KWAIKKVSKE 151 200 ENSP00000416750/1-514 KAGSSAVKLL EREVNILKSV KHEHIIHLEQ VFETPKKMYL VMELCEDGEL ENSBTAP00000042938/1-486 KAGSSAVKLL EREVDILKSV KHEHIIHLEQ VFETPKKMYL VMELCEDGEL ENSTTRP00000015727/1-474 KAGSSAVKLL EREVTILKSV KHKHIIHLEQ VFETPKKMYL VMELCEDGEL bmy_18084T0/1-357 KAGSSAVKLL EREVTILKSV KHEHIIHLEQ VFETPKKMYL VMELCEDGEL BACU004468/1-516 KAGSSAVKLL EREVTILKSV KHEHIIHLEQ VFETPKKMYL VMELCEDGEL 201 250 ENSP00000416750/1-514 KEILDRKGHF SENETRWIIQ SLASAIAYLH NNDIVHRDLK LENIMVKSSL ENSBTAP00000042938/1-486 KEILERKGHF SENETRWIIQ SLASAIAYLH NKDIVHRDLK LENIMVKSSF ENSTTRP00000015727/1-474 RGILNRKGHF SENETRWIIR SLASAIAYLH NKDIVHRDLK LENIMVKSSF bmy_18084T0/1-357 KEILDRKGHF SENETRWIIQ SLASAIAYLH NKDIVHRDLK LENIMVKSSF BACU004468/1-516 KEILDRKGHF SENETRWIIR SLASAIAYLH NKDIVHRDLK LENIMVKSSF 251 300 ENSP00000416750/1-514 IDDNNEINLN IKVTDFGLAV KKQSRSEAML QATCGTPIYM APEVISAHDY ENSBTAP00000042938/1-486 IDANNEMNLN IKVTDFGLAV KKHGRSEVML QTTCGTPIYM APEVINAHDY ENSTTRP00000015727/1-474 IDANDEMNLN IKVTDFGLAV KKQGRSEAML QTTCGTPIYM APEVINAHDY bmy_18084T0/1-357 IDANDEMNLN IKVTDFGLAV KKQGRSEAML QTTCGTPIYM APEVINAHDY BACU004468/1-516 IDANDEMNLN IKVTDFGLAV KKQGRSEAML QTTCGTPIYM APEVINAHDY 301 350 ENSP00000416750/1-514 SQQCDIWSIG VVMYMLLRGE PPFLASSEEK LFELIRKGEL HFENAVWNSI ENSBTAP00000042938/1-486 SQQCDIWSIG VIMYILLCGK APFMASSEEK LFELIKKGEL HFKNSIWNSI ENSTTRP00000015727/1-474 SQQCDIWSIG VIMYILLCGE APFMASSEEK LFELIRKGEL HFKGSVWDSI bmy_18084T0/1-357 SQQCDIWSIG VIMYILLCGE APFMASSEEK LFELIRKGEL HFKDSVWDSI BACU004468/1-516 SQQCDIWSIG VIMYILLCGE APFMASSEEK LFELIRKGEL HFKDSVWDSI 351 400 ENSP00000416750/1-514 SDCAKSVLKQ LMKVDPAHRI TAKELLDNQW LTGNKLSSVR PTNVLEMMKE ENSBTAP00000042938/1-486 SDCAKSVLKQ LMKVDPAHRI TAKELLDNQW LTGNTVSSAR PTNVLEMMKE ENSTTRP00000015727/1-474 SDSAKSVLKQ LMKVDPAHRI TAKELLDNQW LTGNILSSAR PTNVLEMMKE bmy_18084T0/1-357 SDSAKSVLKQ LMKVDPAHRI TAKELLDNQW LTG------- ---------- BACU004468/1-516 SDSAKSVLKQ LMKVDPAHRI TAKELLDNQW LTGNILSSAR PTNVLEMMKE 401 450 ENSP00000416750/1-514 WKNNPESVEE NTTEEKNKPS TEEKLKSYQP WGNVPDANYT SDEEEEKQST ENSBTAP00000042938/1-486 WKNNPESDEE STTDQRDSRS GQEESKVYQP SRNVPDVSNS SDEEEGKQ-- ENSTTRP00000015727/1-474 WKNNPGSDEE STTDQKNNWS GQEKLKGYQP SRSI-HVRNS SDEEEGKQPT bmy_18084T0/1-357 ---------- ---------- ---------- ---------- ---------- BACU004468/1-516 WKNNPGSDEE STTDQRNNWS GQEKLKGYQP SRSI-HVSNS SDEEEGKQPT 451 500 ENSP00000416750/1-514 AYEKQFPATS KDNF---DMC SSSFTSSKLL PAEIKGEMEK TPVTPSQGTA ENSBTAP00000042938/1-486 -VGRTNKTCR KNNC------ ---FIS---P NCEI------ -PSQHLEHFC ENSTTRP00000015727/1-474 AYEKTSVPSK KENMDDSDMS YSSYISSRLP SVELKGEIEK PPTTSGQGTA bmy_18084T0/1-357 ---------- ---------- ---------- ---------- ---------- BACU004468/1-516 AYEKTSVPSK KENMDDLDMS YSSYISSRLP SVELKGEIEK PPATSSQGTA 501 550 ENSP00000416750/1-514 TKYPAKSGAL SRTKKKL- ENSBTAP00000042938/1-486 NSFFVVGL-- -------- ENSTTRP00000015727/1-474 PRGTAKSIAL PRTKKKLK bmy_18084T0/1-357 ---------- -------- BACU004468/1-516 TKGTAKSIAL PRTKKKL-