KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:13 2014 Check: 00 .. Name: ENSP00000415899/1-701 Len: 730 Check: 4279 Weight: 1.00 Name: ENSBTAP00000042966/1-702 Len: 730 Check: 1504 Weight: 1.00 Name: ENSTTRP00000009644/1-702 Len: 730 Check: 8535 Weight: 1.00 Name: bmy_18601T0/1-642 Len: 730 Check: 7093 Weight: 1.00 Name: BACU002222/1-712 Len: 730 Check: 6432 Weight: 1.00 // 1 50 ENSP00000415899/1-701 ---------- ---------- --------ME EDTDYRIRFS SLCFFNDHVG ENSBTAP00000042966/1-702 ---------- ---------- --------ME EDTDFRIRFS SLCFITDHVG ENSTTRP00000009644/1-702 ---------- ---------- --------ME EDTDFRIRFS SLCFITDHVG bmy_18601T0/1-642 ---------- ---------- --------ME EDTDFRIRFS SLCFITDHVG BACU002222/1-712 MLKGDATFGD EKVKAMTEMK WKWHCYLRME DDTGFRIRFS SLCFITDHVG 51 100 ENSP00000415899/1-701 FHGTIKSSPS DFIVIEIDEQ GQLVNKTIDE PIFKISEIQL EPNNFPKKPK ENSBTAP00000042966/1-702 FCGTIKSSPS DFIVIEIDEQ GELVNKESDK LVYEVSKVLP EPNTLAKKAK ENSTTRP00000009644/1-702 FHGTIKSSPS DFVVIEIDEQ GQLVNKASDE PIHKVNKILP GPNNLAKKTN bmy_18601T0/1-642 FHGTIKSSPS DFVVIEIDEX GQLVNKASDE AIYKVNKILP GPNNLAKKTK BACU002222/1-712 FHGTIKSSPS DFVVIEIDEQ GQLVNKASNE PIYKVNKILP GPNNLAKKTK 101 150 ENSP00000415899/1-701 LDLQNLSLED GRNQEVHTLI KYTDGDQNHQ SGSEKEDTIV DGTSKCEEK- ENSBTAP00000042966/1-702 LDLQILSFEE TSNQEVSTLA GSSSDDHNFV PCSEKEDTIK YRTYKGEEEN ENSTTRP00000009644/1-702 LDPQNLSFEE RSNQEVNTLA GCSGDDQNYE PGSEKEDTIE DGTSKGEEEN bmy_18601T0/1-642 LDPQNLSFEE RSNQEVSTLA GCSGDDQNYE PGSEKEDTIK DGTSKGEEEN BACU002222/1-712 LDPQNLSFEE RSNQEVSPLA ECSGDDQNYE PGSEKEDTIK DGTYKGEEEN 151 200 ENSP00000415899/1-701 ADVLSSFLDE KTHELLNNFA CDVREKWLSK TELIGLPPEF SIGRILDKNQ ENSBTAP00000042966/1-702 VDVLGSLLDE KTNELLNQFA CNIKEKWDSK TELIGPSPEF SLGRILDKNQ ENSTTRP00000009644/1-702 IDVLGSLLDE KTNELLNRFA CDVKEKWNSN TELIGPSSEF SLGRILDKNQ bmy_18601T0/1-642 IDVLGSLLDE KTYELLNQFA CDIKEKWNSK TELIGPSPEF XLGRILDKNQ BACU002222/1-712 IDVLGSLLDE KTNELLNQFA CDIKEKWNSK TELIGPSPEF SLGRILDKNQ 201 250 ENSP00000415899/1-701 RASLHSAIRQ KFPFLVTVGK NSEIVVKPNL EYKELCHLVS EEEAFDFFKY ENSBTAP00000042966/1-702 RATLHSAIRQ KFPFLITVGK NSEIVVRPNL EYKELCHLVS EEEAFDFFKY ENSTTRP00000009644/1-702 RAILHSAIRQ KFPFLITVGK NSEIVVKPNL EYKELCHLVS EEEAFDFFKY bmy_18601T0/1-642 RAILHSAIRQ KFPFLITVGK NSEIVVKPNL EYKELCHLVS EEEAFDFFKY BACU002222/1-712 RAILHSAIRQ KFPFLITVGK NSEIVVKPNL EYKELCHLVS EEEAFDFFKY 251 300 ENSP00000415899/1-701 LDAKKENSKF TFKPDTNKDH RKAVHHFVNK KFGNLVETKS FSKMNCSAGN ENSBTAP00000042966/1-702 LDAKKENSKF TFKPDTNKEH RKAVHHFVNK KFGNLVETKS FPELNDSADN ENSTTRP00000009644/1-702 LDAKKENSKF TFKPDINKDH RKAVHHFINK KFGNLVETKS FPEPNYSADN bmy_18601T0/1-642 LDAKKENSKF TFKPDINKDH RKAVHHFINK KFGNLVETKS FPEPNYSADN BACU002222/1-712 LDAKKENSKF TFKPDINKDH RKAVHHFINK KFGNLVETKS FPEPNYSADN 301 350 ENSP00000415899/1-701 PNVVVTVRFR EKAHKRGKRP LSECQEGKVI YTAFTLRKEN LEMFEAIGFL ENSBTAP00000042966/1-702 PNVVITVRFR VKAHKHCKRS LLECQGRKDI YTAFTLRKEN LEMFEAVGFL ENSTTRP00000009644/1-702 PKVMITVRFR EKAHKPRKRF LHGCQERRVI YTAFTLRKEN LEMFEAVGFL bmy_18601T0/1-642 PNVVITVRFR EKAHKHRKRS LLECQERKVM YTAFTLRKEN LEMFEAVGFL BACU002222/1-712 PNVVITVRFR EKAHKHRKRS LLECQERKVI YTAFTLRKEN LEMFEAVGFL 351 400 ENSP00000415899/1-701 AIKLGVIPSD FSYAGLKDKK AITYQAMVVR KVTPERLKNI EKEIEKKRMN ENSBTAP00000042966/1-702 AVKLGVIPSD FSYAGLKDKK AITYQAMVVR KVTPERLKNI EKEVEKKRMN ENSTTRP00000009644/1-702 AIKLGVIPSD FSYAGLKDKK AITYQAMVVR KVTPERLKNI EKEIEKKRMN bmy_18601T0/1-642 AIKLGVIPSD FSYAGLKDKK AITYQAMVVR KVTPERLKNV EKEIEKKRMN BACU002222/1-712 AIKLGVIPSD FSYAGLKDKK AITYQAMVVR KVTPERLKNI EKEIEKKRMN 401 450 ENSP00000415899/1-701 VFNIRSVDDS LRLGQLKGNH FDIVIRNLKK QINDSANLRE RIMEAIENVK ENSBTAP00000042966/1-702 VFNIRSVEDS LRLGQLKGNH FDIVIRNLKN QINDSANLRE RILEAIENVK ENSTTRP00000009644/1-702 VFNIRSVDDS LRLGQLKGNH FDIVIRNLKN QINDSANLRE RILEAVENVK bmy_18601T0/1-642 VFNIRSVDDS LRLGQLKGNH FDIV------ ---------- ---------- BACU002222/1-712 VFNIRSVDDS LRLGQLKGNH FDIVIRNLKN QINDSANLRE RILEAVENVK 451 500 ENSP00000415899/1-701 KKGFVNYYGP QRFGKGRKVH TDQIGLALLK NEMMKAIKLF LTPEDLDDPV ENSBTAP00000042966/1-702 NKGFVNYYGP QRFGMGRKVH TDQIGLALLK SETVKAVKLF FTPEDLDDPV ENSTTRP00000009644/1-702 NKGFVNYYGP QRFGMGRKVH TDQIGLALLK SEMVKAVQLF LTPEELDDPV bmy_18601T0/1-642 ---------- ---------- ---------- ----KAVKLF LTPEDLDDPV BACU002222/1-712 NKGFVNYYGP QRFGMGRKVH TDQIGLALLK SEMVKAVKLF LTPEDLDDPV 501 550 ENSP00000415899/1-701 NRAKKYFLQT EDAKGTLSLM PEFKVRERAL LEALHRFGMT EEGCIQAWFS ENSBTAP00000042966/1-702 NRAKKYFLQT EDAKGTLALM PEFKVRERAL LESLHRFGVT EEGYIQAWFS ENSTTRP00000009644/1-702 NRAKKYFLQT EDAKGTLSLM PEFKVRERAL LESLHRFGVT EEGCIQAWFS bmy_18601T0/1-642 NRAKKYFLQT EDAKGTLSLM PEFKVRERAL LESLHRFGVT XEGCIQAWFS BACU002222/1-712 NRAKKYFLQT EDAKGTLSLM PEFKVRERAL LESLHRFGVT EEGSIQAWFS 551 600 ENSP00000415899/1-701 LPHSMRIFYV HAYTSKIWNE AVSYRLETYG ARVVQGDLVC LDEDIDDENF ENSBTAP00000042966/1-702 FPHSLRIFYV HAYSSKIWNE AVSYRLETYG SRVVEGDLVC LDEDADNEQL ENSTTRP00000009644/1-702 FPHSMRIFYV HAYSSKIWNE AVSYRLATYG SRVVEGDLVC LDEDIDDEHL bmy_18601T0/1-642 FPHSMRIFYV HAYSSKIWNE AVSYRLATYG SRVVEGDLVC LDEDIDDEHL BACU002222/1-712 FPHSMRIFYV HAYSSKIWNE AVSYRLATYG SRVVEGDLVC LDEDIDDERL 601 650 ENSP00000415899/1-701 PNSKIHLVTE EEGSANMYAI HQVVLPVLGY NIQYPKNKVG QWYHDILSRD ENSBTAP00000042966/1-702 PSSKVHLVTE EEESANTYAI HQVVLPVLGC NIQYPKNKVG QWYQEVLSRD ENSTTRP00000009644/1-702 PSSKVHLVTE EEESANTYAI HQVVLPVLGY NIQYPKNKLG KWYQEVLSRD bmy_18601T0/1-642 PSSKVHLVTE EEESANTYAI HQVVLPVLGY SIQYPKNKLG KWYQEVLSRD BACU002222/1-712 PSSK------ ---------- --VVLPVLGY NIQYPKNKLG KWYQEVLSRD 651 700 ENSP00000415899/1-701 GLQTCRFKVP TLKLNIPGCY RQILKHPCNL SYQLMEDHDI DVKTKGSHID ENSBTAP00000042966/1-702 GLQTCKFKIP TLKLNVPGCY RKILKHPCNL SYQLMEDHGI DVKKEGSHID ENSTTRP00000009644/1-702 GLQTCRFKIP TLKLNVPGCY RKILKHPCNL SYQLIEEHDI DVTKEGSHID bmy_18601T0/1-642 GLQTCRFKIP TLKLNVPGCY RKILKHPCNL SYQLIEDHDI DVMKEGSHID BACU002222/1-712 GLQTCRFKIP TLKLNVPGCY RKILKHPCNL SYQLTEDHDI DVMNEGSHID 701 750 ENSP00000415899/1-701 ETALSLLISF DLDASCYATV CLKEIMKHDV ENSBTAP00000042966/1-702 EATLSLLISF DLDASCYATV CLREIMKHDF ENSTTRP00000009644/1-702 EATLSLLISF DLDASCYATV CLREIMKHDF bmy_18601T0/1-642 EATLSLVISF DLDASCYATV CLREIMKHDF BACU002222/1-712 EATSSLLISF DLDASCYATV CLREIMKHDF