KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:13 2014 Check: 00 .. Name: BACU019303/1-535 Len: 581 Check: 3522 Weight: 1.00 Name: bmy_07690T0/1-410 Len: 581 Check: 4380 Weight: 1.00 Name: ENSP00000313377/1-570 Len: 581 Check: 5078 Weight: 1.00 Name: ENSTTRP00000007007/1-563 Len: 581 Check: 8482 Weight: 1.00 Name: ENSBTAP00000042968/1-468 Len: 581 Check: 616 Weight: 1.00 // 1 50 BACU019303/1-535 -RGRGPLHQR VHWAAPPSLS AQQHRLL-LR PARIPTLAVL RP--DPSLSL bmy_07690T0/1-410 ---------- ---------- ---------- ---------- ---------- ENSP00000313377/1-570 MRRLGPFHPR VHWAAPPSLS SGLHRLLFLR GTRIPSSTTL SPPRHDSLSL ENSTTRP00000007007/1-563 -RGRRPLHQR VYWAAPPSLC AQQHRLL-LC PARIPSLAVL PP---PSLSL ENSBTAP00000042968/1-468 ---------- ---------- ---------- ---------- ---------- 51 100 BACU019303/1-535 DGGAVDPPRM RQPIGYEVFG PPPSCLDWLA ARWRNGRGGL PRMFFCSGWI bmy_07690T0/1-410 ---------- ---------- ---------- ---MDCRGEM GNTARCGG-- ENSP00000313377/1-570 DGGTVNPPRV REPTGREAFG PSPASSDWLP ARWRNGRGGR PRARLCSGWT ENSTTRP00000007007/1-563 GGGAVDPPRI RQPIGQEAFG PLPACLDWLA ACWRNGRGGL PRVFFCSGWI ENSBTAP00000042968/1-468 ---------- ---------- ---------- ---------- ---------- 101 150 BACU019303/1-535 APEGATX--- --GATSASRQ RV-------- -----ESLRK KRPRKCPAGR bmy_07690T0/1-410 ------SPLL LGFWTVIASI NLILLMI--- ---------- ---------- ENSP00000313377/1-570 AAEEARRNPT LGGL--LGRQ RLLLRMGGGR LGAPMERHGR ASATSVSSAG ENSTTRP00000007007/1-563 AAEEATR-AL VGGW--LGRQ RFLLRMGAGR LGAPMERHWG VSASSV---R ENSBTAP00000042968/1-468 ---------- LGGW--LGRQ RWLLRMGAGW LAAPMERHGR AAATSASSAR 151 200 BACU019303/1-535 PRVSPCPLPA RSPFFPRGDS APARWSQVGA --------GL TPGWRPRVPR bmy_07690T0/1-410 -----CFQIR QSHFFSQKPF ---------- --------CV YSSWKPQ--- ENSP00000313377/1-570 EQAAGDPEGR RQEPLRRRAS SASV-PAVGA --------SA EGTRRDRLGS ENSTTRP00000007007/1-563 EPAPGGPDGR RREPLRRRAN SASA-SAVGA SA------SA EGVRRDRPGS ENSBTAP00000042968/1-468 EPVPGGPDGR RREPLRRRAN SASA-PAVGA SASASASPSA EGVRRDRPGS 201 250 BACU019303/1-535 RGGCGFQKKS CSDFFFLPHL VFPWFGLDIG GTLVKLVYFE PKDITAEEEE bmy_07690T0/1-410 ---------- ---------- VFPWFGLDIG GTLVKLVYFE PKDITAEEEE ENSP00000313377/1-570 YSGPTSVSRQ RVESLRKKRP LFPWFGLDIG GTLVKLVYFE PKDITAEEEE ENSTTRP00000007007/1-563 YSGATSASRQ RVESLRKKRP LFPWFGLDIG GTLVKLVYFE PKDITAEEEE ENSBTAP00000042968/1-468 YSGATSASRQ RVESLRKKRP LFPWFGLDIG GTLVKLVYFE PKDITAEEEE 251 300 BACU019303/1-535 EEVESLKSIR KYLTSNVAYG STGIRDVHLE LKDLTLCGRK GNLHFIRFPT bmy_07690T0/1-410 EEVESLKSIR KYLTSNVAYG STGIRDVHLE LKDLTLCGRK GNLHFIRFPT ENSP00000313377/1-570 EEVESLKSIR KYLTSNVAYG STGIRDVHLE LKDLTLCGRK GNLHFIRFPT ENSTTRP00000007007/1-563 EEVESLKSIR KYLTSNVAYG STGIRDVHLE LKDLTLCGRK GNLHFIRFPT ENSBTAP00000042968/1-468 EEVESLKSIR KYLTSNVAYG STGIRDVHLE LKDLTLCGRK GNLHFIRFPT 301 350 BACU019303/1-535 HDMPAFIQMG RDKNFSSLHT VFCATGGGAY KFEEDFLTIG DLQLCKLDEL bmy_07690T0/1-410 HDMPAFIQMG RDKNFSSLHT VFCATGGGAY KFEQDFLTIG DLQLCKLDEL ENSP00000313377/1-570 HDMPAFIQMG RDKNFSSLHT VFCATGGGAY KFEQDFLTIG DLQLCKLDEL ENSTTRP00000007007/1-563 HDMPAFIQMG RDKNFSSLHT VFCATGGGAY KFEQDFLTIG DLQLCKLDEL ENSBTAP00000042968/1-468 HDMPAFIQMG RDKNFSSLHT VFCATGGGAY KFEQDFLTIG DLQLCKLDEL 351 400 BACU019303/1-535 DCLIKGILYI DSVGFNGRSQ CYYFENPADS EKCQKLPFDL RNPYPLLLVN bmy_07690T0/1-410 DCLIKGILYI DSVGFNGRSQ CYYFENPADS EKCQKLPFDL RNPYPLLLVN ENSP00000313377/1-570 DCLIKGILYI DSVGFNGRSQ CYYFENPADS EKCQKLPFDL KNPYPLLLVN ENSTTRP00000007007/1-563 DCLIKGILYI DSVGFNGRSQ CYYFENPADS EKCQKLPFDL RNPYPLLLVN ENSBTAP00000042968/1-468 DCLIKGILYI DSVGFNGRSQ CYYFENPADS EKCQKLPFDL KNPYPLLLVN 401 450 BACU019303/1-535 IGSGVSILAV YSKDNYKRVT GTSLGGGTFF GLCCLLTGCT TFEEALEMAS bmy_07690T0/1-410 IGSGVSILAV YSKDNYKRVT GTSLGGGTFF GLCCLLTGCT TFEEALEMAS ENSP00000313377/1-570 IGSGVSILAV YSKDNYKRVT GTSLGGGTFF GLCCLLTGCT TFEEALEMAS ENSTTRP00000007007/1-563 IGSGVSILAV YSKDNYKRVT GTSLGGGTFF GLCCLLTGCT TFEEALEMAS ENSBTAP00000042968/1-468 IGSGVSILAV YSKDNYKRVT GTSLGGGTFF GLCCLLTGCT TFEEALEMAS 451 500 BACU019303/1-535 RGDSTKVDKL VRDIYGGDYE RFGLPGWAVA SSFGNMMSKE KREAVSKEDL bmy_07690T0/1-410 RGDSTKVDKL VRDIYGGDYE ---------- -SFGNMMSKE KREAVSKEDL ENSP00000313377/1-570 RGDSTKVDKL VRDIYGGDYE RFGLPGWAVA SSFGNMMSKE KREAVSKEDL ENSTTRP00000007007/1-563 RGDSTKVDKL VRDIYGGDYE RFGLPGWAVA SSFGNMMSKE KREAVSKEDL ENSBTAP00000042968/1-468 RGDSTKVDKL VRDIYGGDYE RFGLPGWAVA SSFGNMMSKE KREAVSKEDL 501 550 BACU019303/1-535 ARATLITITN NIGSIARMCA LNENINQVVF VGNFLRINTI AMRLLAYALD bmy_07690T0/1-410 ARATLITITN NIGSIARMCA LNENINQVVF VGNFLRINTI AMRLLAYALD ENSP00000313377/1-570 ARATLITITN NIGSIARMCA LNENINQVVF VGNFLRINTI AMRLLAYALD ENSTTRP00000007007/1-563 ARATLITITN NIGSIARMCA LNENINQVVF VGNFLRINTI AMRLLAYALD ENSBTAP00000042968/1-468 ARATLITITN NIGSIARMCA LNENINQVVF VGNFLRINTI AMRLLAYALD 551 600 BACU019303/1-535 YWSKGQLKAL FSEHE----- ---------- - bmy_07690T0/1-410 YWSKGQLKAL FSEHEGYFGA VGALLELLKI P ENSP00000313377/1-570 YWSKGQLKAL FSEHEGYFGA VGALLELLKI P ENSTTRP00000007007/1-563 YWSKGQLKAL FSEHEGYFGA VGALLELLKI P ENSBTAP00000042968/1-468 YWSKGQLKAL FSEHEGYFGA VGALLELLKI P