KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:16 2014 Check: 00 .. Name: ENSTTRP00000001026/1-309 Len: 399 Check: 9210 Weight: 1.00 Name: bmy_01159T0/1-335 Len: 399 Check: 574 Weight: 1.00 Name: BACU000855/1-357 Len: 399 Check: 8660 Weight: 1.00 Name: ENSP00000384391/1-297 Len: 399 Check: 4400 Weight: 1.00 Name: ENSBTAP00000042995/1-307 Len: 399 Check: 767 Weight: 1.00 // 1 50 ENSTTRP00000001026/1-309 MQTLGRAMRM EAREAAPPAG -----AGGWS KWVRLNVGGT VFLTTRQTLC bmy_01159T0/1-335 MQTLGRAMRM EAREAAPPAG -----AGGWS KWVRLNVGGT VFLTTRQTLC BACU000855/1-357 MQTLGRAMRM EAREAAPPAG -----AGGWG RWVRLNVGGT VFLTTRQTLC ENSP00000384391/1-297 MQTPRPAMRM EAGEAAPPAG AGGRAAGGWG KWVRLNVGGT VFLTTRQTLC ENSBTAP00000042995/1-307 MQTLGRAMRM EAGEAAPPAG -----AGGWG KWVRLNVGGT VFLTTRQTLC 51 100 ENSTTRP00000001026/1-309 REQKSFLSRL CQGEELQSDR DETGAYLIDR -PTYFGPILN FLRHGKLVLD bmy_01159T0/1-335 REQKSFLSRL CQGEELQSDR DETGAYLIDR DPTYFGPILN FLRHGKLVLD BACU000855/1-357 REQKSFLSRL CQGEELQSDR DETGAYLIDR DPTYFGPILN FLRHGKLVLD ENSP00000384391/1-297 REQKSFLSRL CQGEELQSDR DETGAYLIDR DPTYFGPILN FLRHGKLVLD ENSBTAP00000042995/1-307 REQKSFLSRL CQGEELQSDR DETGAYLIDR DPTYFGPILN FLRHGKLVLD 101 150 ENSTTRP00000001026/1-309 KDMAEEGVLE EAEFYNIGPL IRIIKDRMEE KDYTVTQVPP KHVYRVLQCQ bmy_01159T0/1-335 KDMAEEGVLE EAEFYNIGPL IRIIKDRMEE KDYTVTQVPP KHVYRVLQCQ BACU000855/1-357 KDMAEEGVLE EAEFYNIGPL IRIIKDRMEE KDYTVTQVPP KHVYRVLQCQ ENSP00000384391/1-297 KDMAEEGVLE EAEFYNIGPL IRIIKDRMEE KDYTVTQVPP KHVYRVLQCQ ENSBTAP00000042995/1-307 KDMAEEGVLE EAEFYNIGPL IRIIKDRMEE KDYTVTQVPP KHVYRVLQCQ 151 200 ENSTTRP00000001026/1-309 EEELTQMV-- IMDGWRFEQL VSIGSSYNYG SEDQAEFLCV VSKELYSSPH bmy_01159T0/1-335 EEELTQMVST MSDGWRFEQL VNIGSSYNYG SEDQAEFLCV VSKELYSSPH BACU000855/1-357 EEELTQMVST MSDGWRFEQL VNIGSSYNYG SEDQAEFLCV VSKELYSSPH ENSP00000384391/1-297 EEELTQMVST MSDGWRFEQL VNIGSSYNYG SEDQAEFLCV VSKELHSTPN ENSBTAP00000042995/1-307 EEELTQMVST MSDGWRFEQL VNIGSSYNYG SEDQAEFLCV VSKELYSSPH 201 250 ENSTTRP00000001026/1-309 GXXXXXXXXX XRAEEQLEER QRQE---VEV AQVQVEVEAD TQQK------ bmy_01159T0/1-335 GLSSESSRKT KRAEEQLEER Q-QE---VEV EVAQVQVEAD AQEKGAANPQ BACU000855/1-357 GLSSESSRKT KRAEEQLEER Q-QE---VEV EVAQVQVEAD AQEK------ ENSP00000384391/1-297 GLSSESSRKT KSTEEQLEEQ QQQEEEVEEV EVEQVQVEAD AQEKGSR--- ENSBTAP00000042995/1-307 GLSSESSRKT KSAEEQLEQQ QEQE------ ----VQVEAD TQEK------ 251 300 ENSTTRP00000001026/1-309 ---------- ---------- ---AQSSQDP ANLSSL-SPP PPPPPLPAG- bmy_01159T0/1-335 GERLLIKAGA SRPLPAGARR RTWAQSSQDP ANLFSLSPPP PPPPPLPAG- BACU000855/1-357 ---------- ---------- ---AQPSQDP ANLFSLSPPP PPPPPLPAGG ENSP00000384391/1-297 ---------- ---------- ---------- -------P-- ---------- ENSBTAP00000042995/1-307 ---------- ---------- ---AQSSQDP ANLFSL-PPP PPPPPLPAGG 301 350 ENSTTRP00000001026/1-309 ---------- ---------- ---------- ---------- --------RL bmy_01159T0/1-335 ---------- ---------- ---------- ---------- ---------- BACU000855/1-357 PASSSSTSSS SWISSTPCLF PLCPCPGFLS ACSHLHPGAA VVPASCALHP ENSP00000384391/1-297 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042995/1-307 ---------- ---------- ---------- ---------- -------FWL 351 400 ENSTTRP00000001026/1-309 RPLRPEAALA VRASPGPLAR PQSCHACCYK PEAPGCEALD RLQGLRVPF bmy_01159T0/1-335 GAPAPHPRAS CLPPPAPLLA PPASGP---G EEGHSCTSLV PADPAG-HI BACU000855/1-357 GAPAPHPRAS LLPPPAPLLA PPASGP---G EEGHSCSSLV PADPAG-HI ENSP00000384391/1-297 HPLRPEAELA VRASPRPLAR PQSCHPCCYK PEAPGCEAPD HLQGLGVPI ENSBTAP00000042995/1-307 HPLRPEVVLA GRASPGPLAC PQSYHACCYK PEAPGCKAPD RLQGLGVPF