KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:16 2014 Check: 00 .. Name: ENSTTRP00000007584/1-404 Len: 658 Check: 8424 Weight: 1.00 Name: bmy_13738T0/1-378 Len: 658 Check: 5032 Weight: 1.00 Name: ENSP00000250244/1-423 Len: 658 Check: 5750 Weight: 1.00 Name: BACU002493/1-655 Len: 658 Check: 4349 Weight: 1.00 Name: ENSBTAP00000043007/1-423 Len: 658 Check: 5956 Weight: 1.00 // 1 50 ENSTTRP00000007584/1-404 ---------- ----PLISRN YKGDVAMSEI EHFMPLLMQR EEEGALAPLM bmy_13738T0/1-378 MSASAVFILD VKGK------ ---------- ---------R EEEGALAPLM ENSP00000250244/1-423 MSASAVFILD VKGKPLISRN YKGDVAMSKI EHFMPLLVQR EEEGALAPLL BACU002493/1-655 MSASAVFILD VKGKPLISRN YKGDVAMSEI EHFMPLLMQR EEEGALAPLM ENSBTAP00000043007/1-423 MSASAVFILD VKGKPLISRN YKGDVAMSEI DHFMPLLMQR EEEGALTPLL 51 100 ENSTTRP00000007584/1-404 SHGRVHFLWI KYSNLYLVAT TLKNAN-SLV YSFLYKTVEV FSEYFKELEE bmy_13738T0/1-378 SHGRVHFLWI KYSNLYLVAT TLKNANASLV YSFLYKTVE- ------ELEE ENSP00000250244/1-423 SHGQVHFLWI KHSNLYLVAT TSKNANASLV YSFLYKTIEV FCEYFKELEE BACU002493/1-655 SHGRVHFLWI KYSNLYLVAT TLKNANASLV YSFLYKTVEV FSEYFKELEE ENSBTAP00000043007/1-423 SHGRVHFLWI KYSNLYLVAT TLKNANASLV YSFLYKIVEV FSEYFKELEE 101 150 ENSTTRP00000007584/1-404 ESIRDNFVIV YELLDELMDF GFPQTTDSKI L-EYITXXXX XXXXXXXXXX bmy_13738T0/1-378 ESIRDNFVIV YELLDELMDF GFPQTTDSKI LQEYITQQGN KLETGKSRVP ENSP00000250244/1-423 ESIRDNFVIV YELLDELMDF GFPQTTDSKI LQEYITQQSN KLETGKSRVP BACU002493/1-655 ESIRDNFVIV YELLDELMDF GFPQTTDSKI LQEYITQQGN KLETGKSRVP ENSBTAP00000043007/1-423 ESIRDNFVIV YELLDELMDF GFPQTTDSKI LQEYITQQGN KLETGKSRVP 151 200 ENSTTRP00000007584/1-404 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXVNANGSVL LSEIVGTIKL bmy_13738T0/1-378 PTVTNAVSWR SEGIKYKKNE VFIDVIESVN LLVNANGSVL LSEIVGTIKL ENSP00000250244/1-423 PTVTNAVSWR SEGIKYKKNE VFIDVIESVN LLVNANGSVL LSEIVGTIKL BACU002493/1-655 PTVTNAVSWR SEGIKYKKNE VFIDVIESVN LLVNANGSVL LSEIVGTIKL ENSBTAP00000043007/1-423 PTVTNAVSWR SEGIKYKKNE VFIDVIESVN LLVNANGSVL LSEIVGSIKL 201 250 ENSTTRP00000007584/1-404 KVFLSGMPEL RLGLNDRVLF ELTGRSKNKS VELEDVKFHQ CVRLSRFDND bmy_13738T0/1-378 KVFLSGMPEL RLGLNDRVLF ELTGRSKNKS VELEDVKFHQ CVRLSRFDND ENSP00000250244/1-423 KVFLSGMPEL RLGLNDRVLF ELTGRSKNKS VELEDVKFHQ CVRLSRFDND BACU002493/1-655 KVFLSGMPEL RLGLNDRVLF ELTGRSKNKS VELEDVKFHQ CVRLSRFDND ENSBTAP00000043007/1-423 KVFLSGMPEL RLGLNDRVLF ELTGRSKNKS VELEDVKFHQ CVRLSRFDND 251 300 ENSTTRP00000007584/1-404 RTISFIPPDG DFELMSYRLS TQVKPLIWIE SVIEKFSHSR VEIMVKAKGQ bmy_13738T0/1-378 RTISFIPPDG DFELMSYRLS TQVKPLIWIE SVIEKFSHSR VEIMVKAKGQ ENSP00000250244/1-423 RTISFIPPDG DFELMSYRLS TQVKPLIWIE SVIEKFSHSR VEIMVKAKGQ BACU002493/1-655 RTISFIPPDG DFELMSYRLS TQVKPLIWIE SVIEKFSHSR VEIMVKAKGQ ENSBTAP00000043007/1-423 RTISFIPPDG DFELMSYRLS TQVKPLIWIE SVIEKFSHSR VEIMVKAKGQ 301 350 ENSTTRP00000007584/1-404 FKKQSVANSV EISVPVPSDA DSPRFKTSVG SAKYMPEKNV VIWSIKSFP- bmy_13738T0/1-378 FKKQSVANSV EISVPVPSDA DSPRFKTSVG SAKYMPEKNV VIWSI----- ENSP00000250244/1-423 FKKQSVANGV EISVPVPSDA DSPRFKTSVG SAKYVPERNV VIWSIKSFPG BACU002493/1-655 FKKQSVANSV EISVPVPSDA DSPRFKTSVG SAKYMPEKNV VIWSIKSFPG ENSBTAP00000043007/1-423 FKKQSVANGV EISVPVPSDA DSPRFKTSVG SAKYVPEKNT VIWSIKSFPG 351 400 ENSTTRP00000007584/1-404 GKEYLMRAHF GLPSVENEEV EGR-PIGVKF EIPYFTVSGI QVRYM---KI bmy_13738T0/1-378 ---------- ---NVEKEEV EGRPPIGVKF EIPYFTVSGI QIINFVPARR ENSP00000250244/1-423 GKEYLMRAHF GLPSVEKEEV EGRPPIGVKF EIPYFTVSGI QVRYM---KI BACU002493/1-655 GKEYLMRAHF GLPSVEKEEV EGRPPIGVKF EIPYFTVSGI QVRYM---KI ENSBTAP00000043007/1-423 GKEYLMRAHF GLPSVEKEEV EGRPPIGVKF EIPYFTVSGI QVRYM---KI 401 450 ENSTTRP00000007584/1-404 IEKSGYQA-P WVRYITQSG- ---------- ---------- ---------- bmy_13738T0/1-378 EKKWGFEHGP SSPQAPTA-- ---------- ---------- ---------- ENSP00000250244/1-423 IEKSGYQALP WVRYITQSG- ---------- ---------- ---------- BACU002493/1-655 IEKSGYQALP WVRYITQSGV KPALFPARPA HLKNRKPRHC RRSTGRRSSS ENSBTAP00000043007/1-423 IEKSGYQALP WVRYITQSG- ---------- ---------- ---------- 451 500 ENSTTRP00000007584/1-404 ---------- ---------- ---------- ---------- ---------- bmy_13738T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSP00000250244/1-423 ---------- ---------- ---------- ---------- ---------- BACU002493/1-655 NQKRTRPRRC AQPPWRRVAI GCAGRVGGAL RGPEPGNAAG LKRSEFLRKR ENSBTAP00000043007/1-423 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000007584/1-404 ---------- ---------- ---------- ---------- ---------- bmy_13738T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSP00000250244/1-423 ---------- ---------- ---------- ---------- ---------- BACU002493/1-655 IRGVWGRDPE RAGSAPWRPA RLRRRRLLRT DPARRGGGRV MMFGSPTIAL ENSBTAP00000043007/1-423 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000007584/1-404 ---------- ---------- ---------- ---------- ---------- bmy_13738T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSP00000250244/1-423 ---------- ---------- ---------- ---------- ---------- BACU002493/1-655 ELLKQGASPN VQDASGTTPA HDAARTGFLD TLKVLVEHGA DVNAPDGTGA ENSBTAP00000043007/1-423 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000007584/1-404 ---------- ---------- --DYQLRTS- ---------- ---------- bmy_13738T0/1-378 ---------- ---------- --DSREREGR WD-------- ---------- ENSP00000250244/1-423 ---------- ---------- --DYQLRTS- ---------- ---------- BACU002493/1-655 LPIHLAVREG HTAVVGFLAA ESDLHHRDAR GLTPLELARG RGAKDLMDIL ENSBTAP00000043007/1-423 ---------- ---------- --DYQLRTS- ---------- ---------- 651 700 ENSTTRP00000007584/1-404 -------- bmy_13738T0/1-378 -------- ENSP00000250244/1-423 -------- BACU002493/1-655 QWHTVAPL ENSBTAP00000043007/1-423 --------