KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:18 2014 Check: 00 .. Name: ENSP00000259456/1-484 Len: 490 Check: 8791 Weight: 1.00 Name: ENSBTAP00000043053/1-447 Len: 490 Check: 5168 Weight: 1.00 Name: ENSTTRP00000010265/1-443 Len: 490 Check: 4352 Weight: 1.00 Name: bmy_01805T0/1-410 Len: 490 Check: 5873 Weight: 1.00 Name: BACU017565/1-410 Len: 490 Check: 4539 Weight: 1.00 // 1 50 ENSP00000259456/1-484 MDLGKDQSHL KHHQTPDPHQ EENHSPEVIG TWSLRNRELL RKRKAEVHEK ENSBTAP00000043053/1-447 MDLGKDQSLS KLHQTPDHHQ EETHVPEVIG TWSLRNREQL RKRKAEAQEK ENSTTRP00000010265/1-443 MDLGKDQSHL MLHQIPDPHQ EENHVPEVIG AWSLRTREHL RKRKDEAQEK bmy_01805T0/1-410 MDLGKDQSHL MLHQTPDPHQ EENHVPEVVG TWSLRNREQL RKRKAEAQEK BACU017565/1-410 MDLGKDQSHL MLHQTPDPHQ EENHVPEVIG TRNLRNREQL RKRKAEAQEK 51 100 ENSP00000259456/1-484 ETSQWLFGEQ KKRKQQRTGK GNRRGRKRQQ NTELKVEPQP QIEKEIVEKA ENSBTAP00000043053/1-447 QTSQWQYRE- KKHKRQRTGK RSERGRKRQQ NTEMKVELPS QLEKEMMEKA ENSTTRP00000010265/1-443 QTSQW-FGE- KKHKRQRTGK RSERGRKRQQ NTETKVEPLS QLEKEMMEKA bmy_01805T0/1-410 QTSQWQFGE- KKHKRQRTGK RSERGRKRQQ NTETKVEPLS QLEKEMMEKA BACU017565/1-410 QTSQWQFGE- KKHKRQRTGK RSERGRKRQQ NTETKVEPLS QLEKEMMEKA 101 150 ENSP00000259456/1-484 LAPIEKKTEP PGSITKVFPS VASPQKVVPE EHFSEICQES NIYQENFSEY ENSBTAP00000043053/1-447 PAPGEKEIEP PGSVTEVLLP AVSPQRVAPA KHLSEVGQES VTLQENSSEY ENSTTRP00000010265/1-443 PAPTEKETEP PRSVTEALLP VASTQRVVPK KHFSEIGQES IIHQENSSEY bmy_01805T0/1-410 PAPTEKETEP PRSVTEALLP VASTQRVVPK KHFSEIDQES IIHQENSSEY BACU017565/1-410 PAPTEKETEP PRSVTEALLP VASTQRVVPK KPFSEIGQES IIHQENSSEY 151 200 ENSP00000259456/1-484 QEIAVQNHSS ETCQHVSEPE DLSPKMYQEI SVLQDNSSKI CQDMKEPEDN ENSBTAP00000043053/1-447 QATAVQNQPS EICQDMAESE DLSPKMCQEI AIF------- ---------- ENSTTRP00000010265/1-443 QETAVQNHPS EILQDMAESG DLSPKMYQEI AVF------- ---------- bmy_01805T0/1-410 QETAVQNHTS EIRQDMAESE DLSPKMCQEI AVF------- ---------- BACU017565/1-410 QETAVQNHPS EIRQDMAESE DLSPKMCQEI AVF------- ---------- 201 250 ENSP00000259456/1-484 SPNTCQVISV IQDHPFKMYQ DMAKREDLAP KMCQEAAVPK ILPCPTSEDT ENSBTAP00000043053/1-447 ---------- -QDQPFKMFR NMAQPEDVSP KTCQEDIAAK VLSSKTSEDT ENSTTRP00000010265/1-443 ---------- -QDHPSQMRH DMAQPEDLSL KMCQETAAAK ALSSKTSEDV bmy_01805T0/1-410 ---------- -QDHPSKMCH DMAQPEDLSL KMCQETSAAK ALSSKTSEDI BACU017565/1-410 ---------- -QDHPSKMCH DMAQPEDLSL KMCQETAATK ALSSKTSEDI 251 300 ENSP00000259456/1-484 ADLAGCSLQA YPKPDVPKGY ILDTDQNPAE PEEYN-ETDQ GIAETEGLFP ENSBTAP00000043053/1-447 TDLEECSLEA HPKPDMPKAS TLETYQKRPE PEEPDSETGQ GIVETESFVS ENSTTRP00000010265/1-443 ADLEGCPLEA YPKSDVPKGY TLETYQKRAE PEEHNSELGQ GIAETENFVP bmy_01805T0/1-410 ADLEGCPLEA YPKPDVPKGY TLETYQKRAE PEEHNSELGH GIAETENFVP BACU017565/1-410 ADLEGCPLEA YPKPEVPKGY TLETYQKRAE PEEHNSELGH GIAETENFVP 301 350 ENSP00000259456/1-484 KI-QEIAEPK DLSTKTHQES AEPKYLPHKT CNEIIVPKAP SHKTIQETPH ENSBTAP00000043053/1-447 NTQQEMAVPK ELATEIHQET VEPEHFSHKI YREIAMSKDP SHKTT----- ENSTTRP00000010265/1-443 EA-QEIAVPK ELSIKTYQEA VEPEHFSHKT YKEITVSKAP SHKTI----- bmy_01805T0/1-410 KT-QEIAVPK ELSIKTYQET VETEHFSHKT YKEIAVSKDP SHKTI----- BACU017565/1-410 KT-QEIAVPK ELSIKTYQET VETEHFSHKS YKEIAVSKAP SHKTI----- 351 400 ENSP00000259456/1-484 SEDYSIEINQ ETPGSEKYSP ETYQEIPGLE EYSPEIYQET SQLEEYSPEI ENSBTAP00000043053/1-447 ---------Q ETSVPDKYPP EMYQETPGSE EYSLEIYQET TGPEAYAPEI ENSTTRP00000010265/1-443 ---------Q ETPAPEKYSP EIYQETPGSE EYSPEIYQET AGPEDYAPEI bmy_01805T0/1-410 ---------Q ETPAPEKYSP EIYQETXGSE EYXPEIYQET AGPEDYAPEI BACU017565/1-410 ---------Q ETPAPEKYSP EIYQETPGSE EYSPEIYQET AGPEDYAPEI 401 450 ENSP00000259456/1-484 YQETPGPEDL STETYKNKDV PKECFPEPHQ ETGGPQGQDP KAHQEDAKDA ENSBTAP00000043053/1-447 YQETPGPEDL STKTYKDKDV PKECFPKLYQ EIGGPQDQDS KAHQEDAKDV ENSTTRP00000010265/1-443 YQEIPGPEDL STKTYKDKDV PEECFPELHQ ERGGPQDQDP KAHQEDAKDV bmy_01805T0/1-410 YQETPGPEDL STKTYKDKDV PEECFPELYQ ERGGPQDQDP KAHQEDAKDV BACU017565/1-410 YQETPGPEDL STKTYKDKDV PEECFPELYQ ERGGPQDQDP KAHQEDAKDV 451 500 ENSP00000259456/1-484 YTFPQEMKEK PKEE----PG IPAILNESHP ENDVYSYVLF ENSBTAP00000043053/1-447 YTFPQEMKEN PKAEEPEIIE IPNVPQESNP ENDIYSYVLF ENSTTRP00000010265/1-443 YISS-EMKEK PKAEEPEIPA IPNVPQEIQP ENKIYS-VLF bmy_01805T0/1-410 YIFP------ ---------- ---------- ---------- BACU017565/1-410 YIFP------ ---------- ---------- ----------