KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:54:19 2014 Check: 00 .. Name: ENSTTRP00000010951/1-406 Len: 515 Check: 1673 Weight: 1.00 Name: ENSBTAP00000043054/1-515 Len: 515 Check: 3713 Weight: 1.00 Name: bmy_05336T0/1-346 Len: 515 Check: 8542 Weight: 1.00 Name: BACU018129/1-393 Len: 515 Check: 5321 Weight: 1.00 // 1 50 ENSTTRP00000010951/1-406 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043054/1-515 MEARELESPT PTYHLIPEAS QPREEEGDCM LPQRATETMQ LKKEISLLNG bmy_05336T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU018129/1-393 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000010951/1-406 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043054/1-515 VSLVVGNMIG SGIFVSPKGV LVYTASYGLS LVIWAVGGLF SVVGALCYAE bmy_05336T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU018129/1-393 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000010951/1-406 -------SGA SYAYILEAFG GFIAFIRLWA SLLIVEPTSQ AIIAITFANY ENSBTAP00000043054/1-515 LGTTITKSGA SYAYILEAFG GFIAFIRLWA SLLIVEPTGQ AIIAITFANY bmy_05336T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU018129/1-393 --MRDAAPGA QHRAEIN--- --------W- --------RH VELGLAVETS 151 200 ENSTTRP00000010951/1-406 IIQPSFPTCE PPYLACRLLA AACMCLLTFV NCAYVKWGTR VQDTFTYAKV ENSBTAP00000043054/1-515 IIQPSFPTCE PPYLACRLLA AACMCLLTFV NCAYVKWGTR VQDMFTYAKV bmy_05336T0/1-346 ---------- ---------M VFFLGLLTFV NCAYVKWGTR VQDTFTYAKV BACU018129/1-393 FSSSYLTIYD EVAYESVMFA YFLTGLLTFV NCAYVKWGTR VQDTFTYAKV 201 250 ENSTTRP00000010951/1-406 LALIAIIVMG LVKLCQXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000043054/1-515 LALIAIIVMG LVKLCQGHSE HFQDAFKGSS WDVGDLSLAL YSALFSYSGW bmy_05336T0/1-346 LALIAIIVMG LVKLCQGHSE HFQDAFKGSS WDLGDLSLAL YSALFSYSGW BACU018129/1-393 LALIAIIVMG LVKLCQGHSE HFQDAFKGSS WDLGDLSLAL YSALFSYSGW 251 300 ENSTTRP00000010951/1-406 XXXXXXXXXX XXXXXNLPWS IGI-MPIVTL IYI-TNVAYY TVLSISDVLG ENSBTAP00000043054/1-515 DTLNFVTEEI KNPERNLPLA IGISMPIVTL IYILTNVAYY TVLSISDVLG bmy_05336T0/1-346 DTLNFVTEEI KNPERNLPLA IGISMPTVTL IYILTNVAYY TVLSISDVLG BACU018129/1-393 DTLNFVTEEI KNPERNLPLA IGISMPIVTL IYILTNVAYY TVLSISDVLG 301 350 ENSTTRP00000010951/1-406 SDAVAVTFAD QTFGLFSWTI PIAVALSCFG GLNASIFASS RLFFVGSREG ENSBTAP00000043054/1-515 SDAVAVTFAD QTFGMFGWTI PIAVALSCFG GLNASIFASS RLFFVGSREG bmy_05336T0/1-346 SDAVAVTFAD QTFGMFSWTI PIAVALSCFG GLNASIFASS RLFFVGSREG BACU018129/1-393 SDAVAVTFAD QTFGMFSWTI PIAVALSCFG GLNASIFASS RLFFVGSREG 351 400 ENSTTRP00000010951/1-406 HLPDLLSMIH VERFTPIPAL LFNCTMTLIY LTVEDVFLLI NYFSFSYWFF ENSBTAP00000043054/1-515 HLPDLLSMIH IERFTPIPAL LFNCTMTLIY LTVEDVFLLI NYFSFSYWFF bmy_05336T0/1-346 HLPDLLSMIH VERFTPIPAL LFNCTMTLIY LTVEDVFLLI NYFSFSYWFF BACU018129/1-393 HLPDLLSMIH VERFTPIPAL LFNCTMTLIY LTVEDVFLLI NYFSFSYWFF 401 450 ENSTTRP00000010951/1-406 VGLSVAGQLY LRWKEPERPR PLKLSLFFPI VFCVCSLFLV VVPLFSDTIN ENSBTAP00000043054/1-515 VGLSVAGQLY LRWKEPDRPR PLKLSLFFPI VFCICSLFLV IVPLFSDTIN bmy_05336T0/1-346 VGLSVAGQLY LRWKEPERPR PLKLSLFFPI VFCICSLFLV VVPLFSDTIN BACU018129/1-393 VGLSVAGQLY LRWKEPERPR PLKLSLFFPI VFCICSLFLV VVPLFSDTIN 451 500 ENSTTRP00000010951/1-406 SLIGIGIALS GVPIYFLGVY LPESRRPLFI RNVLAAITKV TQKLCFCVLT ENSBTAP00000043054/1-515 SLIGIGITLS GVPVYFLGVY LPESRRPLFI RNVLAAITKV TQKLCFCVLT bmy_05336T0/1-346 SLIGIGIALS GVPIYFLGVY LPESRRPLFI RNVLAAITEV TQKLCFCVLT BACU018129/1-393 SLIGIGIALS GVPIYFLGVY LPESRRPLFI RNVLAAITEV TQKLCFCVLT 501 550 ENSTTRP00000010951/1-406 ELDVAEERQV ERKTE ENSBTAP00000043054/1-515 ELDVAEERQA ERKTE bmy_05336T0/1-346 ELDVAEERQV ERKTE BACU018129/1-393 ELDVAEERQV ERKTE