KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:20 2014 Check: 00 .. Name: ENSP00000387194/1-308 Len: 668 Check: 3948 Weight: 1.00 Name: ENSBTAP00000043066/1-614 Len: 668 Check: 4562 Weight: 1.00 Name: ENSTTRP00000000350/1-575 Len: 668 Check: 7645 Weight: 1.00 Name: bmy_08176T0/1-658 Len: 668 Check: 7480 Weight: 1.00 Name: BACU004684/1-573 Len: 668 Check: 8526 Weight: 1.00 // 1 50 ENSP00000387194/1-308 ---------- ---------- ---------- ---------- --MEEEGGGR ENSBTAP00000043066/1-614 ---------- ---------- ---------- ---------- --MGEEGGGR ENSTTRP00000000350/1-575 ---------- ---------- ---------- ---------- ---------- bmy_08176T0/1-658 REEPEAGSVA RSGVGISRRC LATGRTLAGP PANPRSSLKS PTMGEEGGGR BACU004684/1-573 ---------- ---------- ---------- ---------- --MGEEGGGR 51 100 ENSP00000387194/1-308 SCGTTRELQK LKQQAMEYYR ENDVPRRLEE LLNSTFYLQP ADVYGHL--- ENSBTAP00000043066/1-614 SCGSTRELQK LKQQAMEYYR ENDVPRRLEE LLNSTFYLQP ADVYGHLSAN ENSTTRP00000000350/1-575 ---------- ---------- ---------- ------YFQP ADVYGHLXAN bmy_08176T0/1-658 SCGTTRDLQK LKQQAMEYYR ENDVPRRLEE LLNSTFYLQP ADVYGHL-AS BACU004684/1-573 SCGTTRDLQK LKQQAMEYYR ENDVPRRLEE LLNSTFYLQP ADVYGHL-AN 101 150 ENSP00000387194/1-308 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043066/1-614 CFSKLAKPPT ICKVVGKNVL DGLGLPTLQV EIFCTIQNFP KNICSVVIAT ENSTTRP00000000350/1-575 CFSKLAKPPT ICKVVGKNVL DGLGLPTLQV EIFCTIQNFP KNICSVVIST bmy_08176T0/1-658 CFSKLAKPPT ICKVVGKNVL DGLGLPTLQV EIFCTVQNFP KNICSVVIST BACU004684/1-573 CFSKLAKPPT ICKVVGKNVL DGLGLPTLQV EIFCTIQNFP KNICSVVIST 151 200 ENSP00000387194/1-308 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043066/1-614 HFEAHENASP ELVEAEEVER LDAVSTAVQW VNETLTEELQ GLVPSSQAEV ENSTTRP00000000350/1-575 HFDVHENALP ELAEAEELER SDAVSTAVRW VNETITEELQ A-APSNQAEV bmy_08176T0/1-658 HFEVHENALP ELVEAEELER SDAVSTAVRW VNETITEELQ GLAPSNQAEV BACU004684/1-573 HFEVHENALP ELVEAEELER SDAVSTAVRW VNETITEELQ GLAPSNQAEV 201 250 ENSP00000387194/1-308 ---------- ---------- ---------- --PSP----- ---------- ENSBTAP00000043066/1-614 DQVLRTFFEN KVQEDKERKE LEKNLEDSTV LSPQPPPPPP PPPPPSKKKG ENSTTRP00000000350/1-575 DQVLXXXXXX XXXXXXXXXX XXXSLEDSTV PTPSPLTPPL PPPPPAKKKG bmy_08176T0/1-658 DQVLRTFFES KVQEDKERKE LEESLEDSTV PTPSPLTPPP PPPPPAKKKG BACU004684/1-573 DQVLRTFFES KVQEDKERKE LEKSLEDSTV PTPSPLTPPP PPPPPAKKKG 251 300 ENSP00000387194/1-308 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043066/1-614 QKQGRMETSA EKPIIPAEPP EPVLCGSMAI GAVSLAVAKA SAVLDNNPLY ENSTTRP00000000350/1-575 QKQGRKDTLT EKPIIPPEPV EPILCGSMAI GAVSLAVAKT SAVLGSNPLY bmy_08176T0/1-658 QKQGRKDTLT EKPIIPPEPV EPILCGSMAI GAVSLAVAKT SAVLGNNPLY BACU004684/1-573 QKQGRKDTLT EKPIVPPEPV EPTLCGSMAI GAVSLAVAKT SAVLGNNPLY 301 350 ENSP00000387194/1-308 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043066/1-614 LNIALLKHHQ EQPEKLTIPL LMVSLVSCGK SSPGKLNLMK EVICIPHPGL ENSTTRP00000000350/1-575 LNIALLKHHQ EQPAKLTIPL LMVSLVSCGK SSPGKLNLMK EVIGIPHP-L bmy_08176T0/1-658 LNIALLKHHQ DQPAKLTIPL LMVSLVSCGK SSPGKLNLMK EVICIPHPGL BACU004684/1-573 LNIALLKHH- ---------- ---------- ---------- ---------- 351 400 ENSP00000387194/1-308 ---------- ---------- -----PKAET KKGHD-GSKR GQQQITGKMS ENSBTAP00000043066/1-614 TAKQGVEMLL EIQKHINKAI EMSPPPKPET KKSHD-GGKR GQQQITGKMS ENSTTRP00000000350/1-575 TAKQGVDMLL EIQKHINQAI EMSPPPKPET RKSQN-GGKR GQQQITGKMS bmy_08176T0/1-658 TAKQGVDMLL EIQKHINKTI EMSPPPKPET KKGHN-GGKR GQQQITGKMS BACU004684/1-573 ---QGVDMLL EIQKHINKTI EMSPPPKPET KKGHNGGGKR GQQQITGKMS 401 450 ENSP00000387194/1-308 HLGCLTINCD SIEQPLLLIQ EICANLGLEL GTNLHLAINC AGHELMDY-- ENSBTAP00000043066/1-614 HLGCLTINYD TIEQPLLLIQ GICANLGLEL GTNLHLAINC AAHELMDYSK ENSTTRP00000000350/1-575 HLGCLTINYD TIEQPLLLIQ GICANLGLEM GTNLHLAINC AAHELMDYSK bmy_08176T0/1-658 HLGCLTINYD TIEQPLLLIQ GICANLGLEM GTNLHLAINC AAHELMDYSK BACU004684/1-573 HLGCLTINYD TIEQPLLLIQ GICANLGLEM GTNLHLAINC AAHELMDYSK 451 500 ENSP00000387194/1-308 ---------- ---------- ---------- ---------- DSEQWDSIYH ENSBTAP00000043066/1-614 GKYEVMMGTY KNAAEMVDLY VDLINKFPSI IALIDPFRKE DSEQWDSIYN ENSTTRP00000000350/1-575 GKYEVMMGTY KNAAEMVDLY VELINKFPSI IALIDPFRKE DSEQWDSTYN bmy_08176T0/1-658 GKYEVMMGTY KNAAEMVDLY VELINKFPSI IALIDPFRKE DSEQWDSTYN BACU004684/1-573 GKYEVMMGTY KNAAEMVDLY VELINKFPSI IALIDPFRKE DSEQWDSTYN 501 550 ENSP00000387194/1-308 ALGSRCYIIA GTASKSISKL LEQGNISIPK SNGLIIKHTN QTTMSDLVEI ENSBTAP00000043066/1-614 ALGSRCYIIA GTASKSISKL LEEGNISILK YSGLIIKHIN QTTMSDLVEI ENSTTRP00000000350/1-575 ALGSKCYIIA GTASKSISKL LEDGNVGILR CSGLIVKHTN QTTMSDLVEM bmy_08176T0/1-658 ALGSKCYIIA GTASKSISKL LEDGNIGXLR CSGLIVKHTN QTTMSDLVEM BACU004684/1-573 ALGSKCYIIA GTASKSISKL LEDGNIGILR CSGLIVKHTN QTTMSDLVEM 551 600 ENSP00000387194/1-308 TNLIDSKKHI TVFGSTEGES SDDSLVDLAV GLGVRFIKLG GLSRGERVTK ENSBTAP00000043066/1-614 TNLIDGKKLI AVFGSTEGES SDDSLVDLAV GLGVRFIKLG GLSRGERVTK ENSTTRP00000000350/1-575 TNLIDSKKHI AVFGSAEGES SDDSLVDLAV GLGVRFIKLG GLSRGERVTK bmy_08176T0/1-658 TNLIDSKKHI AVFGSAEGES SDDSLVDLAV GLGVRFIKLG GLSRGERVTK BACU004684/1-573 TNLIDSKKHI TVFGSAEGES SDDSLVDLAV GLGVRFIKLG GLSRGERVTK 601 650 ENSP00000387194/1-308 YNRLLTIEEE LVQNGTLGFK EEHTFFYFNE EAEKAAEALE AAAAREPLVP ENSBTAP00000043066/1-614 YNRLFTIEEE LGQNGTLGFN EEHTFFSWNE EAE------E AGELHEVPEP ENSTTRP00000000350/1-575 YNRLFTIEEE LVQNGTLGFN EAHTFFYLNE EAEKAA---M AGELPEPPEP bmy_08176T0/1-658 YNRLFTIEEE LVQNGTLGFS EEHTFFYLNE EAEKAA---M AGELPEPPEP BACU004684/1-573 YNRLFTIEEE LVQNGTLGFS EEHTFFYLNE EAEKAA---M AGELPEPPKP 651 700 ENSP00000387194/1-308 TFPTQGVEES AETGASSG ENSBTAP00000043066/1-614 IFPTEVAEDL AKL----- ENSTTRP00000000350/1-575 IFATEVVEES AKTVSSR- bmy_08176T0/1-658 IFATEVVEES AKT----- BACU004684/1-573 IFATEVVEQS AKT-----