KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:24 2014 Check: 00 .. Name: ENSP00000259030/1-246 Len: 727 Check: 8764 Weight: 1.00 Name: ENSBTAP00000043123/1-565 Len: 727 Check: 283 Weight: 1.00 Name: BACU016536/1-695 Len: 727 Check: 5542 Weight: 1.00 Name: bmy_04470T0/1-400 Len: 727 Check: 2120 Weight: 1.00 Name: ENSTTRP00000008532/1-231 Len: 727 Check: 1905 Weight: 1.00 // 1 50 ENSP00000259030/1-246 ---------- ---------- ---------- ---------- -MVVDFWTWE ENSBTAP00000043123/1-565 ---------- ---------- ---------- --MDAKPQSK RIALDIREWE BACU016536/1-695 ---------- ---------- ---------- --MDSRPQSK RMVLDVGTWE bmy_04470T0/1-400 SETKVKRAGD VSPDGETETV FSSCWKLKVT VNMDSRPQSK RMVLDVGTWE ENSTTRP00000008532/1-231 ---------- ---------- ---------- ---------- -MVLDVGTWE 51 100 ENSP00000259030/1-246 QTFQELIQEA KPRATWTLKL DGNLQLDCLA QGWKQYQQRA FGWFRCSSCQ ENSBTAP00000043123/1-565 QTFQELICQE KPRARWTLKM DGNLQPDCVA QGWRQYQQKG FGRFQCSSCR BACU016536/1-695 QIFQELISQE KPEAKWTLKM DGNLQPDCVA PGWKQYKQRA FGRFSCSSCH bmy_04470T0/1-400 QTFQELIWQE KPQARWTLKM DGNLRPDCVA LGWKQYKQRA FGRFWCSSCH ENSTTRP00000008532/1-231 QTFQELIWQE KPQARWTLKM DGNLRPDCAA PGWKQYKQRA FGRFCCSSCH 101 150 ENSP00000259030/1-246 RSWASAQVQI LCHTYWEHWT SQGQVRMRLF GQRCQKCSWS QYEMPEFSSD ENSBTAP00000043123/1-565 RSWASAQVQI LCHMYLENQK SPGKVLMRIF GQRCKKCSRS QFEKPDFSPE BACU016536/1-695 RSWASAQVQI LCHMYLEHQK SQGKVLVRLF GQRCRKCSQS QFEKPEFSLD bmy_04470T0/1-400 RSWASAQVQI LCHMYLEHQK SQGKVLXRLF GQRCRKCSQS QFEKPEFSPE ENSTTRP00000008532/1-231 RSWPSAQVQI LFHMYLEHQK SQGKVLVRLF GQRCRKCSQS QFEKPEFSLD 151 200 ENSP00000259030/1-246 STMRILSNLV QHILKKYYGN GTRKSPEMPV ILEVSLEGSH DTANCEACTL ENSBTAP00000043123/1-565 SSKRILKNLV QRILEKFYRN GIRKVSELPV IPEVRLDGSH DKANCEACVL BACU016536/1-695 STMRILNNLV QRILERFYRN GIRKVLEMPV IQEVPLNGHH DVVNCEACVL bmy_04470T0/1-400 STKRILNNLV QRILERFYSN GIRKVLEIPV IQEVPLDGHH DMVNCEACIL ENSTTRP00000008532/1-231 STKRILNNLV QRILERFYRN GTKKVLEIPV IQEVPLNGHH DTVNCEACAL 201 250 ENSP00000259030/1-246 GICGQGLKSC MTKPSKSLLP HLKTGNSSPG IGAVYLANQA KNQSAEAKEA ENSBTAP00000043123/1-565 GYCGPNLENG MTGPEKSSLS YMKTGSSSPH NGDEGGQNQS RSHSAA---- BACU016536/1-695 GFCVQNLPNC TTEPAKSSLS YTKTGSSSPH LGDVYGQNRA RNQSAEAKEA bmy_04470T0/1-400 GFCVQNLPNC TTEPAKSSLS YTKTGSSSPH LGDVYVQNRA RNQSAEAKET ENSTTRP00000008532/1-231 GFCIQNLHNC MTEPAKSSLS YMKTGSSSPH PGDMCGQNQA RNQSAEAKET 251 300 ENSP00000259030/1-246 KGS------- ---------- GYEKL----G PS-------- ---------- ENSBTAP00000043123/1-565 -GS------- ---------- GYSGAHIGSG PS-------- ---------- BACU016536/1-695 QGSYKDVRPA VDTGLTSHPR GRSSGHKGDR PTAHTGDNPK GHIRVRQSGY bmy_04470T0/1-400 QGS------- ---------- GYSCAHKGPG PS-------- ---------- ENSTTRP00000008532/1-231 QGS------- ---------- GYVCV----- ---------- ---------- 301 350 ENSP00000259030/1-246 ---------- ----RDPDPL NICVFILLLV FIVVKCFTSE ---------- ENSBTAP00000043123/1-565 ---------- ----QVTAGI QVPRRGPQSK REMAQLFTAG ADRQAARATG BACU016536/1-695 REGRPLTTGV KLTAHTGDNP KVHISVRQSG YKEGRPLTTG VKLTAHTGNN bmy_04470T0/1-400 ---------- ----HATAGI QVPGAGPQLK REMGRLLTPG TDRQAAQGPG ENSTTRP00000008532/1-231 ---------- ---------- -----VALFT FLLCKYLVE- ---------- 351 400 ENSP00000259030/1-246 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043123/1-565 PQ-------- -----PIQVA RSLPPGWTDP RPVQAVGPLP AGCAYSQSTL BACU016536/1-695 PKVHIRVTQS GYKEGRPLTT GVKLTAHTGD NPKVHISVRQ SGYREGRPLT bmy_04470T0/1-400 PQ-------- -----PIRVA GSLPPGWTDP RPRQAIGPLP KGLAHSQSTL ENSTTRP00000008532/1-231 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000259030/1-246 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043123/1-565 GRGPQAPRMT YSQAIRMSGQ QSTQEAQATQ GTQLQTTKMA EPQPTGGTIP BACU016536/1-695 TGVKLTAHTG NNPKVHISVR QSGYREGRPL TTGVKLTAHT GNNPKVHIRV bmy_04470T0/1-400 GTGPQNPRLT YSQAIKMSGQ QLTQDAQATQ GAGRQATKVT DPQPTRGTIP ENSTTRP00000008532/1-231 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000259030/1-246 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043123/1-565 RAISRSDSQ- --------AK GRAGPPPQGS SSQPIWKAIP KATSGSDTEA BACU016536/1-695 RQSGYREGRP LTTGLKLTAH TGNNPKVHIS VRQSGYREGR TLTTGVKLTA bmy_04470T0/1-400 RSTSRSDSQ- --------AT G--------- ---------- ---------- ENSTTRP00000008532/1-231 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000259030/1-246 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043123/1-565 TGKAGPPPQG SSSQPTWKAI PKATSGSDTE ATGKAGPPPQ GSSSQPTQKA BACU016536/1-695 HMGNNPKVHI SVRQSGYKEG RPLTTGVKLT AHTGDNPKVH ISVRQSGYKE bmy_04470T0/1-400 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008532/1-231 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000259030/1-246 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043123/1-565 IPKATSGSDT EATGKAGPPP QGSSSQPTWK AIPKATVGSD TEATRRAGPL BACU016536/1-695 GRPLTTGVKL TAHTGNNPKV HIRVRQSGYR EGRPLTTGLK LTAHTGDNPK bmy_04470T0/1-400 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008532/1-231 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000259030/1-246 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043123/1-565 LGSSAQPTWP HVGPSCGSQA AWGREERCSP RGSASDSFFR LPPPNDFHNQ BACU016536/1-695 VHISVRQSGY REGRTLTTGV KLTAHMGNNP KVHIRVRQSG YREGRPLTTG bmy_04470T0/1-400 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008532/1-231 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000259030/1-246 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043123/1-565 EQLFRWGYVC IFALFTFLVS KYL------- ---------- ---------- BACU016536/1-695 VKLTAHMRNN SKVHIRVRQS GYREGRPLTT GFKLTAHMGN NSKVHIRVRQ bmy_04470T0/1-400 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008532/1-231 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000259030/1-246 ---------- ---------- ------- ENSBTAP00000043123/1-565 ---------- ---------- ------- BACU016536/1-695 SGYREGRPLT TGVKLTAHTG NRPHGYM bmy_04470T0/1-400 ---------- ---------- ------- ENSTTRP00000008532/1-231 ---------- ---------- -------