KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:54:25 2014 Check: 00 .. Name: ENSP00000358232/1-467 Len: 481 Check: 577 Weight: 1.00 Name: ENSTTRP00000010351/1-396 Len: 481 Check: 2980 Weight: 1.00 Name: bmy_08182T0/1-443 Len: 481 Check: 4413 Weight: 1.00 Name: ENSBTAP00000043152/1-467 Len: 481 Check: 326 Weight: 1.00 // 1 50 ENSP00000358232/1-467 -----MLGIW IVAFLFFGTS RGKEVCYERL GCFKDGLPWT RTFSTELVGL ENSTTRP00000010351/1-396 ---------- ---------- ---------- ---------- ---------- bmy_08182T0/1-443 GKHSLSLGLV PIILTLYLFA AG-EVCYERV GCFKDGIPWT GTLSRKMA-- ENSBTAP00000043152/1-467 -----FSGLV PIILTLYLLA AGEEVCYERV GCFKDGLPWT GTFSRQFAGL 51 100 ENSP00000358232/1-467 PWSPEKINTR FLLYTIHNPN AYQEISAVNS STIQASYFGT DKITRINIAG ENSTTRP00000010351/1-396 ---------- ---------- ---EISAANY LTLQASHFGT DKITHINIPG bmy_08182T0/1-443 ----EKINTR FLLYTRHNPK VHQEISAANY LTIQASHFGT DKITHISIPG ENSBTAP00000043152/1-467 PWSPEKINTR FLLYTRQNPK VHQEVSAVNY LTIRASHFAT HKITRINIPG 101 150 ENSP00000358232/1-467 WKTDGKWQRD MCNVLLQLED INCINLDWIN GSREYIHAVN NLRVVGAEVA ENSTTRP00000010351/1-396 WKSDG-WQQD -CNVFLKVED VNCINLHWIN GLLKYIHAVS NVRAVGAEIA bmy_08182T0/1-443 WKSDG----- ---------- -NGSKTYWIN GLLQYIHAVN NLCVVGAEVA ENSBTAP00000043152/1-467 WKSDGKWQQD MCNVLLKVED VNCINLDWIN GSLQYIHAVN NLRVVGAEVA 151 200 ENSP00000358232/1-467 YFIDVLMKKF EYSPSKVHLI GHSLGAHLAG EAGSRIPGLG RITGLDPAGP ENSTTRP00000010351/1-396 YCIDVLVKKF GYSPSKVHLI GRSLGAHLAG EAGSRTPGLG RITGLDPTGP bmy_08182T0/1-443 YFIDVLVKKF GYSPSKVHLI GHSLGAHLAG EAGSRMPGLG KITGLDPTGP ENSBTAP00000043152/1-467 YFIDVLVKKF GYSASKVHLI GHSLGAHLAG EAGSRTPGLG RITGLDPAGP 201 250 ENSP00000358232/1-467 FFHNTPKEVR LDPSDANFVD VIHTNAARIL FELGVGTIDA CGHLDFYPNG ENSTTRP00000010351/1-396 GFHSTLNEVR LDPSDANSVD VIHTKEVRFL FELGVGTINA CGHLDFYPNG bmy_08182T0/1-443 GFQNTPNEVR LDLSDANSVD VVHTNEVRFL FELGFGTINA CGHLDFYPNG ENSBTAP00000043152/1-467 CFHDTPNEVR LDPSDANFVD VIHTNAVRLF FELGVGTINA CGHLDFYPNG 251 300 ENSP00000358232/1-467 GKHMPGCEDL ITPLLKFNFN AYKKE----- ----MASFFD CNHARSYQFY ENSTTRP00000010351/1-396 GKHMPRCEDL ITPLFKFDVN IYKEE----- ----VFSFFD CNHARSHRFY bmy_08182T0/1-443 GKHMPGCEDL ITPLFKFDLN IYKEAKYFLK YEDCLFSFFD CNHARSHRFY ENSBTAP00000043152/1-467 GKHMPGCEDL ITPLFKFDLN IYKEE----- ----VFSFFD CNHARSHRFY 301 350 ENSP00000358232/1-467 AESILNPDAF IAYPCRSYTS FKAGNCFFCS KEGCPTMGHF ADRFHFKNMK ENSTTRP00000010351/1-396 AESILNPDAF IAYPCRSYKS FKAGNCFRCH KEGCPMMGHF ADRFHLKKMK bmy_08182T0/1-443 AESILNPGAF IAYPCRSYKA FKAGNCFHYR KEGCPTMGHF ADRFHLKKMK ENSBTAP00000043152/1-467 AESILNPDAF IAYPCRSYKS FKAGNCFHCP KEGCPTMGHF ADRFHLKKMK 351 400 ENSP00000358232/1-467 TNGSHYFLNT GSLSPFARWR HKLSVKLSGS EVTQGTVFLR VGGAVRKTGE ENSTTRP00000010351/1-396 PNRSYYVLNT GTLSPFSRWR HKVSVKLDGN NVTQGSMFLH V-GTTEKTGE bmy_08182T0/1-443 PNRSYYFVNT GTLSPFARWR HKLSVKFDGN HVTQGSIFLR VGGTTQKTGE ENSBTAP00000043152/1-467 PNRLYYFLNT GTVSPFARWR HKLSVKLDGN NVTQGSIFLR VGGTIGKTGE 401 450 ENSP00000358232/1-467 FAIVSGKLEP GMTYTKLIDA DVNVGNITSV QFIWKKHLFE DSQNKLGAEM ENSTTRP00000010351/1-396 FGVVSGTLKP GMTYTNLIDA DINIGNIASI EFIWKELSFE HSQNKLXXXX bmy_08182T0/1-443 FGVVGGTLKP GMTYTNLIDA DINIGNIASI EFIWKELSFE HSQNKLGXEM ENSBTAP00000043152/1-467 FEFVSGTLKP GMTYTDLIDA DINVGNITSI EFIWKEYSFE RSQSKLGAEM 451 500 ENSP00000358232/1-467 VINTSGKYGY KSTFCSQDIM GPNILQNLKP C ENSTTRP00000010351/1-396 XXXXXXXXXX XXSAFFSNFV GPNIAQILKP C bmy_08182T0/1-443 VIDISGKYGY ESAFCS---- ---------- - ENSBTAP00000043152/1-467 VIDISGKYGY QSAFCSQNIV GPNIAQILKP C