KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:25 2014 Check: 00 .. Name: bmy_06069T0/1-474 Len: 477 Check: 3454 Weight: 1.00 Name: ENSBTAP00000043155/1-296 Len: 477 Check: 4874 Weight: 1.00 Name: ENSP00000349016/1-377 Len: 477 Check: 5415 Weight: 1.00 Name: BACU018704/1-343 Len: 477 Check: 5790 Weight: 1.00 Name: ENSTTRP00000002871/1-374 Len: 477 Check: 1098 Weight: 1.00 // 1 50 bmy_06069T0/1-474 MFSQNTELTT SLPDSEPSVT PLLVKRRQGQ PQPLHFLGPC LERRARDRTG ENSBTAP00000043155/1-296 MASSEQAEQP SQPSSAPG-S ENVVPREPLI ATAVKFLQNS RVRQSPLATR ENSP00000349016/1-377 MASSEQAEQP SQPSSTPG-S ENVLPREPLI ATAVKFLQNS RVRQSPLATR BACU018704/1-343 ---------- ---------- ---------I ATAVKFLQNS RVRHSPLATR ENSTTRP00000002871/1-374 MMSSEQAEQP SQPSSNPG-S ENVAPREPLI ATAVKFLQNS RVRHSPLATR 51 100 bmy_06069T0/1-474 LGILLHRGPA IRALSWSRSV FSIPVWSHLV RSLEGVWTYI RARLGVLTAA ENSBTAP00000043155/1-296 RAFLKKKG-- ---------- ---------- ---------- ------LTDE ENSP00000349016/1-377 RAFLKKKG-- ---------- ---------- ---------- ------LTDE BACU018704/1-343 RAFLKKKG-- ---------- ---------- ---------- ------LTDE ENSTTRP00000002871/1-374 RAFLKKKG-- ---------- ---------- ---------- ------LTDE 101 150 bmy_06069T0/1-474 SLDPLFLESG TRALGLQIAS AAHPPPRASA PLDTSPRQLH SPGAWEEEGD ENSBTAP00000043155/1-296 EIDLAFQQSG TAADE----- ---------- PMSLGP---- ---------- ENSP00000349016/1-377 EIDMAFQQSG TAADE----- ---------- PSSLGP---- ---------- BACU018704/1-343 EIDLAFQQSG TAADE----- ---------- PASLGP---- ---------- ENSTTRP00000002871/1-374 EIDLAFQQSG TAADE----- ---------- PASLGP---- ---------- 151 200 bmy_06069T0/1-474 AAQPHPDAHP PSEHETHTPT ETRSLNPRAL LPRGGASASS PDVPFPPTSG ENSBTAP00000043155/1-296 ---------- --------AT QVVPVQPPHL ISQ------- ---PYSPA-- ENSP00000349016/1-377 ---------- --------AT QVVPVQPPHL ISQ------- ---PYSPA-- BACU018704/1-343 ---------- --------AT QVVPVQPPHL IAQ------- ---PYSPA-- ENSTTRP00000002871/1-374 ---------- --------AT QVVPVQPPHL ISQ------- ---PYSPA-- 201 250 bmy_06069T0/1-474 PAGSRWRDYS ALAIIMAGIA FGFHQLYKKY LLPLIMGGRE DRKQLERMEA ENSBTAP00000043155/1-296 --GSRWRDYS ALAIIMAGIT FGFHQLYKKY LLPLIMGGRE DRKQLERMEA ENSP00000349016/1-377 --GSRWRDYG ALAIIMAGIA FGFHQLYKKY LLPLILGGRE DRKQLERMEA BACU018704/1-343 --GSRWRDYS ALAIIMAGIA FGFHQLYKKY LLPLVVGGRE DRKQLERMEA ENSTTRP00000002871/1-374 --GSRWRDYS ALAIIMAGIA FGFHQLYKKY LLPLIMGGRE DRKQLERMEA 251 300 bmy_06069T0/1-474 SLSELSGSVA QTVTQLQMTL ASVQELLIQQ QQKVQELAHE LATAKATTST ENSBTAP00000043155/1-296 SLSELSGSVA QTVTQLQMTL ASVQELLIQQ QQKVQELAHE LATAKATTST ENSP00000349016/1-377 GLSELSGSVA QTVTQLQTTL ASVQELLIQQ QQKIQELAHE LAAAKATTST BACU018704/1-343 SLSELSGSVA QTVTQLQMTL ASVQELLIQQ QQKVQELAHE LATAKATTST ENSTTRP00000002871/1-374 SLSELSGSVA QTVTQLQMTL ASVQELLIQQ QQKVQELAHE LATAKATTST 301 350 bmy_06069T0/1-474 NWILESQNIS ELKSEINSLK GLLLNRRQFP PSPSAPKIPS WQIPVKSPSP ENSBTAP00000043155/1-296 NWILESQNIN ELKSEINSLK GLLLNRRQFP PSPSAPKIPS WQIPVKSPSP ENSP00000349016/1-377 NWILESQNIN ELKSEINSLK GLLLNRRQFP PSPSAPKIPS WQIPVKSPSP BACU018704/1-343 NWILESQNIS ELKSEINSLK GLLLNRRQFP PSPSAPKIPS WQIPVKSPSP ENSTTRP00000002871/1-374 NWILESQNIN ELKSEINSLK GLLLNRRQFP PSPSAPKIPS WQIPVKSPSP 351 400 bmy_06069T0/1-474 SSPAAVNHHS SSDISPVSNE STSSSPVKEG HSPEGSTATY HLLGPQEEGE ENSBTAP00000043155/1-296 SSPAAVNHHS SSDISPVSNE STSSSPPNVF F----CVIRY WYQNIRSD-- ENSP00000349016/1-377 SSPAAVNHHS SSDISPVSNE STSSSPGKEG HSPEGSTVTY HLLGPQEEGE BACU018704/1-343 SSPAAVNHHS SSDISPVSNE STSSSPVKEG HSPEGSTATY HLLGPQEEGE ENSTTRP00000002871/1-374 SSPAAVNHHS SSDISPVSNE STSSSPVKEG HSPEGSTATY HLLGPQEEGE 401 450 bmy_06069T0/1-474 GVVDVKDQVR MEVQGEEEKR ---EDEEDEE DEDVSRVDEE GCLGVQREDR ENSBTAP00000043155/1-296 ---------- ---------- ---------- ---------- -CI------- ENSP00000349016/1-377 GVVDVKGQVR MEVQGEEEKR EDKEDEEDEE DDDVSHVDEE DCLGVQREDR BACU018704/1-343 GVVDVKGQVR MEVQGEEEKR ------EDEE DEDVSRVDEE GCLGVQREDR ENSTTRP00000002871/1-374 GVVDVKGQVR MEVQGEEEKR ---GDEDDEE DEDVSRVDEE DRLGVQREDR 451 500 bmy_06069T0/1-474 RGGDGQINEQ VEKLRRPEGA SNESERD ENSBTAP00000043155/1-296 ---------- ---------- ------- ENSP00000349016/1-377 RGGDGQINEQ VEKLRRPEGA SNESERD BACU018704/1-343 RGGDGQINEQ VEKLRRPEGA SNESERD ENSTTRP00000002871/1-374 RGGDGQINEQ VEKLRRPEGA SNESERD