KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:29 2014 Check: 00 .. Name: ENSP00000027335/1-832 Len: 840 Check: 8460 Weight: 1.00 Name: ENSBTAP00000043215/1-832 Len: 840 Check: 3713 Weight: 1.00 Name: ENSTTRP00000011842/1-832 Len: 840 Check: 4801 Weight: 1.00 Name: bmy_20232T0/1-774 Len: 840 Check: 137 Weight: 1.00 Name: BACU000489/1-790 Len: 840 Check: 6389 Weight: 1.00 // 1 50 ENSP00000027335/1-832 --------MI LQAHLHSLCL LMLYLATGYG QEGKFSGPLK PMTFSIYEGQ ENSBTAP00000043215/1-832 --------MT TQAQLHCLCL LTLYLTTGYG QEGKFSGPLK PMEFSIFEGQ ENSTTRP00000011842/1-832 --------MT MQAQLHCLCL FTLYLTTGYG QEGKFSGPLE PMTFSIFEGQ bmy_20232T0/1-774 MKTLLEIGDL LQILQHCF-- ---------- -------SLQ PNLMFAFS-- BACU000489/1-790 --------ML LAGNQGDF-- --MKDTTGYG QEGKFSGPLK PMTFSIFEGQ 51 100 ENSP00000027335/1-832 EPSQIIFQFK ANPPAVTFEL TGETDNIFVI EREGLLYYNR ALDRETRSTH ENSBTAP00000043215/1-832 EPSQPIFQFK ANPPAVTFKL TGETDGIFQI QSDGLLYHNK SLDRETRAVH ENSTTRP00000011842/1-832 GPSQIIFQFK ASPLAVTFKL TGETDDIFQI QPDGLLYYSK ALDRETRAVH bmy_20232T0/1-774 -------QFK ASPLAVTFKL TGETDDIFQI QPDGLLYHNK ALDRETRAVH BACU000489/1-790 GPSQIIFQFK ASPLAVTFKL TGETDDIFQI QPDGLLYHNK ALDRETRAVH 101 150 ENSP00000027335/1-832 NLQVAALDAN GIIVEGPVPI TIKVKDINDN RPTFLQSKYE GSVRQNSRPG ENSBTAP00000043215/1-832 RLQVSALDAQ GNTVEGPVPV TIEVKDINDN RPVFLQQHYE GSVRQNSRPG ENSTTRP00000011842/1-832 KLQXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_20232T0/1-774 KLQVSALDAH GNTVEGPVPI TIEVKDINDN RPVFLQPKYE GSVRQNSRPG BACU000489/1-790 KLQVSALDAD GNTVEGPVPI TIEVKDINDN RPVFLQPKYE GSVRQNSRPG 151 200 ENSP00000027335/1-832 KPFLYVNATD LDDPATPNGQ LYYQIVIQLP MINNVMYFQI NNKTGAISLT ENSBTAP00000043215/1-832 KPFIYVNATD LDDPATLNGQ LIYQIIMQLP KVNNVMYFQI NNQTGGISLT ENSTTRP00000011842/1-832 KPFMYVNATD LDDPATPNGQ LIYKIIMQLP KVNNVMYFQI NNKTGAISLT bmy_20232T0/1-774 KPFMYVNATD LDDPATPNGQ LIYQIIMQLP KVNNVMYFQI NNKTGAISLT BACU000489/1-790 KPFMYVNATD LDDPATPNGQ LIYQIIMQLP KVNNVMYFQI NNKTGAISLT 201 250 ENSP00000027335/1-832 REGSQELNPA KNPSYNLVIS VKDMGGQSEN SFSDTTSVDI IVTENIWKAP ENSBTAP00000043215/1-832 PQGSQELDPL KNPSYKLLVS VEDMGGLSEH SFTDSVHVDI TVKENIWKPP ENSTTRP00000011842/1-832 LAGSQDLDPL KNPSYKLVVS VEDMGGQNEH SFSDTTSVDI MVKENIWKTP bmy_20232T0/1-774 REGSQELDPL KNPFYNLVVS VEDMGGQKEH SFSDSTSVDI TVKENIWKAP BACU000489/1-790 REGSQELDPL KNPSYKLVVS VQDMGGQNDH SFSDSTSVDI MVKENIWKAP 251 300 ENSP00000027335/1-832 KPVEMVENST DPHPIKITQV RWNDPGAQYS LVDKEKLPRF PFSIDQEGDI ENSBTAP00000043215/1-832 EPVEIEENST EPYPIKITQV QWNDPGALYS LVDKENSPRF PFSIDQKGDI ENSTTRP00000011842/1-832 EPVEIEENST NPYPIKITQV RWNEPDALYS LVEEGKPSKF PFLIDQEGDI bmy_20232T0/1-774 EPVEIEENST NPYPIKITQV QWNDPGALYS LVDKEKPSKF PFLIDQEGDI BACU000489/1-790 EPVEIEENST NPYPIKITQV QWNDPGALYS LVDKEKPSKF PFSIDQEGNI 301 350 ENSP00000027335/1-832 YVTQPLDREE KDAYVFYAVA KDEYGKPLSY PLEIHVKVKD INDNPPTCPS ENSBTAP00000043215/1-832 YVTQPLDREE KDAYVFYAVA RDEQGKSLSI PLKIQVKVKD INDNPPTCPS ENSTTRP00000011842/1-832 YVTQPLDREE KDAYVFYAVA RDEHSKPLAL PLKIQVKVKD INDNPPICPS bmy_20232T0/1-774 YVTQPLDREE KDAYVFYAVA KDEHGKPLAF PLQIQVKVKD INDNPPTCPS BACU000489/1-790 YVTQPLDREE KDAYVFYAVA KDEHGKPLAF PLQIQVKVKD INDNPPTCPS 351 400 ENSP00000027335/1-832 PVTVFEVQEN ERLGNSIGTL TAHDRDEENT ANSFLNYRIV EQTPKLPMDG ENSBTAP00000043215/1-832 PVTVLEVQEN EQIGSSIGTL TAHDMDEQDT INSVLEYRIV DQTPKVPQDG ENSTTRP00000011842/1-832 TVTVLEVQEN EQIGNSIGTL IAHDMDEENT INSVLGYRIV DQTPKVPRDG bmy_20232T0/1-774 TVTVLEVQEN EQIGSSIGTL IAHDMDEENT VNSVLRYRIV DQTPKVPRDG BACU000489/1-790 AVTVLEVQEN EQIGSSIGTL IAHDMDEENN INSVLGYRIV DQTPKVPRDG 401 450 ENSP00000027335/1-832 LFLIQTYAGM LQLAKQSLKK QDTPQYNLTI EVSDKDFKTL CFVQINVIDI ENSBTAP00000043215/1-832 LFLVQEFSGI LQLVVQSLRK WDTPQYNLTI EVSDRDFKTL CFVQINVIDI ENSTTRP00000011842/1-832 LFLVQAYSGM FQLALQSLRK RDTPQYNLTV EVSDKDFKTL CFVQINVIDI bmy_20232T0/1-774 LFLVQTYLGT FQLAVQSLRK RDTPQYNLTV EVSDKDFKTL CFVQINIIDI BACU000489/1-790 LFLVQSYSGT FQLAVQSLQK RDTPQYNLTV EVSDKDFKTL CFVQVNIIDI 451 500 ENSP00000027335/1-832 NDQIPIFEKS DYGNLTLAED TNIGSTILTI QATDADEPFT GSSKILYHII ENSBTAP00000043215/1-832 NDQIPIFEKS DYGNLTFPED TAVGSVILTI QATDADEPHT GSSKILYRIT ENSTTRP00000011842/1-832 NDQIPIFEKS DYGNLTLPED TAIGTVILTI QATDADEPYT GSSKILYRIT bmy_20232T0/1-774 NDQIPIFEKP DYGNLTLPED TAIGTVILTI QATDDDEPHT GSSKILYRIT BACU000489/1-790 NDQIPIFEKP DYGNLTLPED TAIGTVILTI QATDVDEPHT GSSKILYRIT 501 550 ENSP00000027335/1-832 KGDSEGRLGV DTDPHTNTGY VIIKKPLDFE TAAVSNIVFK AENPEPLVFG ENSBTAP00000043215/1-832 QGDSEGRLEI ETDPQTNTGY VKLKKPLDFE TVAIHNIVVQ AENPEPLVPG ENSTTRP00000011842/1-832 QGDSEGHLEI ETDPETNTGY VKVKKPLDFE AADVYNIVFQ AENPEPLVFG bmy_20232T0/1-774 QGDSEGRLEI ETDPETNTGY VKVKKPLDFE AVAVHNIVFQ AENPEPLVPG BACU000489/1-790 QGDSEGRLEI ETDPETNTGY VKVKKPLDFE AVAAHNIVFQ AENPEPLVHG 551 600 ENSP00000027335/1-832 VKYNASSFAK FTLIVTDVNE APQFSQHVFQ AKVSEDVAIG TKVGNVTAKD ENSBTAP00000043215/1-832 VQYNASSSTT FRLTVTDVNE APQFFQQVSE AKVSEAVAKG TKVGNMTAKD ENSTTRP00000011842/1-832 VQYNASSSAT FRLTVTDVNE APQFSQQLYQ AKVREDVAKG TKVGNVTAKD bmy_20232T0/1-774 VQYNASSSAT FRLIVTDVNE APQFSQQVYQ AKVSEDVAKG TKVGNVTAKD BACU000489/1-790 VQYNASSSAT FRLIVTDVNE APQFSQQVYQ AKVSEDVAKG TKVGNVTAKD 601 650 ENSP00000027335/1-832 PEGLDISYSL RGDTRGWLKI DHVTGEIFSV APLDREAGSP YRVQVVATEV ENSBTAP00000043215/1-832 PEGLDVSYSL RGDKRGWLRI DPATGEIFSV ALLDREAESL YRVQVVATEV ENSTTRP00000011842/1-832 PEGLDISYSL RGDKRGWLKI DPVTGEIFNV APLDREAESL YRVQVVATEV bmy_20232T0/1-774 PEGLDISYSL RGDKRGWLKI DPVTGEIFSV APLDREAESL YRVQVVATEV BACU000489/1-790 PEGLDISYSL RGDKRGWLKI DPVTGEIFSV APLDREAESL YRVQVVATEV 651 700 ENSP00000027335/1-832 GGSSLSSVSE FHLILMDVND NPPRLAKDYT GLFFCHPLSA PGSLIFEATD ENSBTAP00000043215/1-832 GGSYLSSTAQ FHLTLTDVND NPPRLVKEYT GLFFCYPPKA PGSLIFEATD ENSTTRP00000011842/1-832 GGSSLSSVVQ FHLTLMDVND NPPRLVKEYT GLFFCYPLKA PGSLIFEATD bmy_20232T0/1-774 GGSSLSSTAQ LHLTLMDVND NPPRLAKEYT GLFFCYPPKA PESLIFEATD BACU000489/1-790 GGSSLSSMAQ FHLTLMDVND NPPRLAKEYT GLFFCHPPKA PESLIFEATD 701 750 ENSP00000027335/1-832 DDQHLFRGPH FTFSLGSGSL QNDWEVSKIN GTHARLSTRH TEFEEREYVV ENSBTAP00000043215/1-832 DDELTFRGRH FTFSLGSESL QKDWEVSKIN GTHARLSTKH TGFEERVYNI ENSTTRP00000011842/1-832 DDQQLFRGRH FTFSLGSESL QKDWEVSKIN GTHARLSTKH TGFEERVYHI bmy_20232T0/1-774 DDQQSFRGRH FTFSLGSESL QKDWEVSKIN GTHARLSTKH TDFEERVYHI BACU000489/1-790 DDQQSFRGRH FTFSLGSESL QKDWEVSKIN GTHASLSTKH TGFEERVYHI 751 800 ENSP00000027335/1-832 LIRINDGGRP PLEGIVSLPV TFCSCVEGSC FRPAGHQTGI PTVGMAVGIL ENSBTAP00000043215/1-832 PIRIGDGGRP PLERTVSLPV TFCKCVENRC FQPAARMPGI PPVGMAVGIL ENSTTRP00000011842/1-832 PVRINDGGRP PLEGIVSLPV TFCKCVEDRC FQPADHMPGI PTVGMTVGIL bmy_20232T0/1-774 PVRINDGGRP PLEGTVSLP- ---------- ---------- ---------- BACU000489/1-790 PVRINDGGRP PLEGTVSLP- ---------- ---------- ---------- 801 850 ENSP00000027335/1-832 LTTLLVIGII LAVVFIRIKK DKGKDNVESA QASEVKPLRS ENSBTAP00000043215/1-832 LATFLVIGII LAVMFFRMKR DKGQHNAESA QASETKPLRN ENSTTRP00000011842/1-832 LTTFLVIGII LAVVFFQIKK NKGQHNVESA QASEVKPLRN bmy_20232T0/1-774 -------GII LAVVFFQIKK NKGQRNVGSA QASEVKPLRN BACU000489/1-790 -------GII LAVVFFQIKK NKGQHNVESA QASEVKPLRN