KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:30 2014 Check: 00 .. Name: ENSP00000252453/1-198 Len: 205 Check: 5832 Weight: 1.00 Name: ENSBTAP00000043232/1-198 Len: 205 Check: 4365 Weight: 1.00 Name: ENSTTRP00000014944/1-205 Len: 205 Check: 6982 Weight: 1.00 Name: bmy_16835T0/1-191 Len: 205 Check: 1176 Weight: 1.00 Name: BACU020359/1-203 Len: 205 Check: 4988 Weight: 1.00 // 1 50 ENSP00000252453/1-198 -------MPV PALCLLWALA MVTRPASAAP MGGPELAQHE ELTLLFHGTL ENSBTAP00000043232/1-198 -------MPM LVLCLLCALA MTAQPALVGS MSGSEPAQQE ELTLLFHGAL ENSTTRP00000014944/1-205 PHPSPPVMPM LMLCLLCALA MVAQPAPVAP MSGSEPAQQE ELTLLFHGAL bmy_16835T0/1-191 -------MPM LVLCLLCALA MVAQPALVAP MSGSEPAQQE ELTLLFHGAL BACU020359/1-203 --PSPPAMPT LVLCLLCALA VVAQPALVAP MSGSEPAQQE ELTLLFHGAL 51 100 ENSP00000252453/1-198 QLGQALNGVY RTTEGRLTKA RNSLGLYGRT IELLGQEVSR GRDAAQELRA ENSBTAP00000043232/1-198 QLSQALNGVY KATEAQLIKA RNSLSLYGQV LGLLGKEVSQ GQDAAQELRA ENSTTRP00000014944/1-205 QLSQALNGVY RATEAQLTEA GRSLSLYGQA LGLLRQEVSQ GQDAAQELRA bmy_16835T0/1-191 QLSQALNGVY RATEAQLTEA GHSLSLYGQA LGLLGQEVSQ GQDAAQELRA BACU020359/1-203 QLSQALNGVY RATEAQLTEA GHSLSLYGQA LGLLGQEVSQ GQDAARELRA 101 150 ENSP00000252453/1-198 SLLETQMEED ILQLQAEATA EVLGEVAQAQ KVLRDSVQRL EVQLRSAWLG ENSBTAP00000043232/1-198 SLLEMQIEED GLKLQAEATA QALGEVARGQ QVLQEKMKQL EVQLKGVWLG ENSTTRP00000014944/1-205 SLLEMQMAED GLKLQAEATA QALEEVAQGQ QVLRKKMKRM EVQLRGAWLG bmy_16835T0/1-191 SLLEMQ---- ---LQAEATA QALGEVAQGQ QVLWKKMKRM EVQLRGAWLG BACU020359/1-203 SLLEMQMEED GLKLQAEATA QALGEVAQGQ QVLWKKMKRM EVQLRGAWLG 151 200 ENSP00000252453/1-198 PAYREFEVLK AHADKQSHIL WALTGHVQRQ RREMVAQQHR LRQIQERLHT ENSBTAP00000043232/1-198 HVRQEFEALK AHADEQSHIV WVLTGHVQRQ KQEMMAQQQR LRQIQERLHM ENSTTRP00000014944/1-205 HARQEFEALK AHADKQSHIV WALVGHMQRQ KQEMMAQQQR LRDIQERLHT bmy_16835T0/1-191 HARQEFEALK VHADKQSHIM WALLGHVQRQ RQEMMAQQQR LRQIQERLHT BACU020359/1-203 HARQEFEALK VHADQQSHIM WALVGHVQRQ RQEMMAQQQR LRQIQERLHT 201 250 ENSP00000252453/1-198 AALPA ENSBTAP00000043232/1-198 AALPA ENSTTRP00000014944/1-205 AALPA bmy_16835T0/1-191 AALPA BACU020359/1-203 AALPA