KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:30 2014 Check: 00 .. Name: ENSP00000312399/1-563 Len: 599 Check: 2184 Weight: 1.00 Name: ENSTTRP00000014129/1-561 Len: 599 Check: 8096 Weight: 1.00 Name: ENSBTAP00000043247/1-558 Len: 599 Check: 3816 Weight: 1.00 Name: bmy_07017T0/1-534 Len: 599 Check: 6974 Weight: 1.00 Name: BACU013611/1-529 Len: 599 Check: 5810 Weight: 1.00 // 1 50 ENSP00000312399/1-563 ---------- ---------- ---------- MSVLKKNRRK DSDTPQEPSE ENSTTRP00000014129/1-561 ---------- ---------- ---------- -MWTKKHRRK DPENSQEPSE ENSBTAP00000043247/1-558 ---------- ---------- ---------- -MPTKKHRRK DPESPQEPSE bmy_07017T0/1-534 MEGEREPRVC SDCASVDFSM ETPNPFLIPP LLDQKKHRRK DPENSQKPSE BACU013611/1-529 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000312399/1-563 KAKEQQAEAE LRKLRQQFRK MVESRKSFKF RNQQKIASQY KEIKTLKTEQ ENSTTRP00000014129/1-561 KTKEQLAEAE LQKLRQQFRK MVDSQKSFNF CSQQKITNQH KEIKTLQEEQ ENSBTAP00000043247/1-558 KTKEQLVEGE LRKLRQQFRK MVDSRKSFNF RSQQKITNQR KEIKTLQEEQ bmy_07017T0/1-534 KTKEQLAEAE LRKLRQQFQK MVGSRKSFNF CSQQKITNQH KEIKTLQEEQ BACU013611/1-529 ---------- ---------- MVDSRKSFNF HSQQKITNQH KEIKTLQEEQ 101 150 ENSP00000312399/1-563 DEITLLLSLM KSSRNMNRSE KNYMELRLLL QTKEDYEALI KSLKVLLAEL ENSTTRP00000014129/1-561 GEITLLLNLI KSSRNLDLNE KNYMELCFLL QTKEDYEALI KSMKVLLAEL ENSBTAP00000043247/1-558 DEITLLLNLI KSSRNLDLNE KNYLELRFLL QTKEDYEALI KSMKLLLAEL bmy_07017T0/1-534 EEITLLLNLI KSSRNLDLNE KNYMELRFLL QTKEEYEALI KSMKVLLAEL BACU013611/1-529 EEITLLLNLI KSSRNLDLNE KNYMELRFLL QTKEDYEALI KSMKVLLAEL 151 200 ENSP00000312399/1-563 DEKILQMEKK IANQKQIFAK MQEANNPRKL QKQIHILETR LNL------V ENSTTRP00000014129/1-561 DEKIIQMEKY IINQRQIFSK IQEANNPQKL QKRIHVLETR LHL------V ENSBTAP00000043247/1-558 DEKIVQMEKK IINQRQIFTK IQEANNPRKL QKQIHILETR LNL------V bmy_07017T0/1-534 DEK------- ---------- ---------- ---------- ---------V BACU013611/1-529 DEKIVQMEKK ITNQRQIFSK IQEANNPRKL QKQIHVLETR LHLVQPSSQV 201 250 ENSP00000312399/1-563 TVHFDKMLTT NAKLRKEIED LRFEKAAYDN VYQQLQHCLL MEKKTMNLAI ENSTTRP00000014129/1-561 TVHFDKMLTT NAKLRKETED LRYEKAAYDN IYKQIHRRLL MQKKTMNMAI ENSBTAP00000043247/1-558 TVHFDQMLTT NAKLRKEIED LRHEKAAYDN VYQHLRRRLL TKKKTMNVAI bmy_07017T0/1-534 TVHFDKMLTT NAKLRKEIED LRYEKAAYDN IYEQIHRRLL MQKKTMNVAM BACU013611/1-529 TVHFDKMLTT NAKLRKEIED LRYEKAAYDN VYEQIHRRLL MQKKTMNVAI 251 300 ENSP00000312399/1-563 EQSSQAYEQR VEAMARMAAM KDRQKKDTSQ YNLEIRELER LYAHESKLKS ENSTTRP00000014129/1-561 EQSAQAYEQX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000043247/1-558 EQSAQAYEQR LEAMARMAAM KDRQQKDISQ YNLEIRELER VYDHETKLKS bmy_07017T0/1-534 EQSAQAYEQR LEAMARMAAM RDRQQKDISR YNLEIGELER LYDHETKLKS BACU013611/1-529 EQSAQAYEQR LEAMARMAAM KDRQQKDISQ YNLEIRELER LYDHETKLKS 301 350 ENSP00000312399/1-563 FLLVKLNDRN EFEEQAKREE ALKAKKHVKK NRGESFESYE VAHLRLLKLA ENSTTRP00000014129/1-561 XXXXXXXXXX XXXXXXXXXX XLKAKTHGKK NKGESFESYE VAHLLLLKLT ENSBTAP00000043247/1-558 FLLIKLNDRL EFEEQSKKEE ALKAKKYGKK SKGASFESYE VAHLRLLKLT bmy_07017T0/1-534 FLLIKLHDRL EFEEQSKKEE ALKAKKHGKK NKGESFESYE VAHLRLLKLM BACU013611/1-529 FLLTKLHDRL EFEEQSKKEE ALKAKKHGKK NKGESFESYE VAYLRLLKLM 351 400 ENSP00000312399/1-563 ESGNLNQLIE DFLAKEEKNF ARFTYVTELN NDMEMMHKRT QRIQDEIILL ENSTTRP00000014129/1-561 KNGNLNQLIE EFLAKEEKNF AQFMYVTELN NDIKMMHKKT ERIQNEVIRS ENSBTAP00000043247/1-558 KTGNLNQLIE EFLAKEEKNF ARFTYVTELN NDMEMMHKKI ERIQNEILRL bmy_07017T0/1-534 KNGNLNQLIE EFLAKEEKNF ARFTY----- ---------- ----NEVIRL BACU013611/1-529 KNGNLNQLIE EFLAKEEKNF ARFTYVTELN NDMEMMHKKT ERIQNEVIRS 401 450 ENSP00000312399/1-563 RSQQKLSHDD NHSVLRQLED KLRKTTEEAD MYESKYGEVS KTLDLLKNSV ENSTTRP00000014129/1-561 QSQQKSSHED SCSILRQLEE KLKKTMEQAD MYENNYKEIN KTLEYLKNSV ENSBTAP00000043247/1-558 RSQQKSSHDD SYSILRELEE KLKKTTEEAD MYENDYREIT KTLEYLKNSV bmy_07017T0/1-534 QSQQKSSHED NRSILRQLEE KLKKTTEEAD MYENNYKEIN KTLEYLKNSV BACU013611/1-529 QSQQKSSHED NRSILRQLEE KLKKTTEEAD MYENNYKEIN KTLEYLKNSV 451 500 ENSP00000312399/1-563 EKLFKKINCD ATKILVQLGE TGKVTDINLP QYFAIIEKKT NDLLLLETYR ENSTTRP00000014129/1-561 ENLFKKVNCD ATKILVQLGE TGKITDTNLP QYFAIIEKKT NDLLLLESYK ENSBTAP00000043247/1-558 ENLFKKINCD ATKILVQLGE TGKVTDINLP QYFAIIEKKT NDLLVLESYK bmy_07017T0/1-534 ENLFKKINCD ATKILVQLGE TGKITDTNLP QYFAIIEKKT NDLLLLESYK BACU013611/1-529 ENLFKKINCD ATKILVQLGE TGKITDTNLP QYFAIIEKKT NDLLLLESYK 501 550 ENSP00000312399/1-563 RILEVEGAEA EIPPPFINPF WGGSALLKPP EPIKVIPPVL GADPFSDRLD ENSTTRP00000014129/1-561 RIMEMEVAEM DVPPPFINPF WGGSALLKPA EPIKVIPPVL GADPFSDRLD ENSBTAP00000043247/1-558 RLMEMEVAEA EVQPSFLNPF WGGSALLKPA EPIKVIPPVL GADPLSDKLD bmy_07017T0/1-534 RIMEMEVAET DVPPPFINPF WGGSAFLKPA EPIKVIPPVL GADPFSDRLD BACU013611/1-529 RIMEMEVAEA DVPPPFINPF WGGSALLKPA EPIKVIPPVL GADPFSDRLD 551 600 ENSP00000312399/1-563 DVEQPLDHSS LRQLVLDNYI LKENRSKEVR GDSLPEKVDD FRSRKKVTM ENSTTRP00000014129/1-561 GVDQPLDHSS LRQMVLSS-T LQESRNRDLH MDSVPEKGDD LRPKKKLTV ENSBTAP00000043247/1-558 EVEQPLDHSS LRQMVLSHYA TRESRNRD-- --SMPEKGDE LKSKKKVTV bmy_07017T0/1-534 EVDQPLDHSS LRQMVLSHCT ARESRNRDLR MESVPENGDD LRPKKKLTV BACU013611/1-529 EVDQPLDHSS LRQMVLSHYT ARESRSRDLR MESVPENGDD LRPKKKLTV