KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:32 2014 Check: 00 .. Name: ENSTTRP00000014647/1-673 Len: 699 Check: 6926 Weight: 1.00 Name: BACU007965/1-657 Len: 699 Check: 4965 Weight: 1.00 Name: ENSP00000004980/1-644 Len: 699 Check: 4836 Weight: 1.00 Name: bmy_19770T0/1-523 Len: 699 Check: 2831 Weight: 1.00 Name: ENSBTAP00000043264/1-645 Len: 699 Check: 9971 Weight: 1.00 // 1 50 ENSTTRP00000014647/1-673 ---------- -----MKIPL TATVCLPGSS PS------GL CIFAEVSDVK BACU007965/1-657 MIPRLLRPRH TAQALRGSST LLFDLSPHPP PP-------- --------LP ENSP00000004980/1-644 ---------- ---------- ---------- ---------- ---------- bmy_19770T0/1-523 ---QLFRCCG GGSGSRRFPG FAFRARPETP SHSSRFRFGL CIFAEVSDVK ENSBTAP00000043264/1-645 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000014647/1-673 IPDMDDTADR MRMDAGEVTL VNHNSVFKTH LLSQTGFPED QLSLSDHQ-I BACU007965/1-657 PNSSSGVVEA VPVRGGSRVL RSAPGRKPLR IAAGSGS--- ---------I ENSP00000004980/1-644 ---MDDIADR MRMDAGEVTL VNHNSVFKTH LLPQTGFPED QLSLSDQQ-I bmy_19770T0/1-523 TPDMDDTADR MRMDAGEVTL VNHNSIFKTH LLSQTGFPED QLSLSDHQ-I ENSBTAP00000043264/1-645 ---PDDIADR MRMDAGEVTL VNHNSIFK-H LLSQTGFSED QLSLSDHQLI 101 150 ENSTTRP00000014647/1-673 LPSRQGNLDR SYTCSTRSAA Y-PNYYSDNP SSDSFLGSGD LRTFGQSANG BACU007965/1-657 LPSRQGNLDR SYTCSTRSAA Y-PNYYSDNP SSDSFLGSGD LRTFGQSANG ENSP00000004980/1-644 LSSRQGHLDR SFTCSTRSAA YNPSYYSDNP SSDSFLGSGD LRTFGQSANG bmy_19770T0/1-523 LPSRQGNLDR SYTCSTRSAA Y-PNYYSDNP SSDSFLGSGD LRTFGQSANG ENSBTAP00000043264/1-645 LPSRRGNLDR SYTCSTRSAA YSPNYFSDNT SSDSFIGSGD LRTFGQSANG 151 200 ENSTTRP00000014647/1-673 QWRNSTPASG STLQKSRNSR SLYLETRKTS SGLSNTFTGK SNHHCHVSAY BACU007965/1-657 QWRNSTPASG STLQKSRNSR SLYLETRKTS SGLSNTFTGK SNHHCHVSAY ENSP00000004980/1-644 QWRNSTPSSS SSLQKSRNSR SLYLETRKTS SGLSNSFAGK SNHHCHVSAY bmy_19770T0/1-523 QWRNSTPASG STLQKSRNSR SLYLETRKTS SGLSNTFTGK SNHHCHVSAY ENSBTAP00000043264/1-645 QWRNSTPVSG STLQKSRNSR SLYLETRKTS SGLSNNFTGK SNHHCHMSAY 201 250 ENSTTRP00000014647/1-673 EKSFPIKPVP SPSWSGSCRR NLLSPKKTQR RHISTAEEXX XXXXXXXXXX BACU007965/1-657 EKSFPIKPVP SPSWSGSCRR NLLSPKKTQR RHISTAEETV QEEEREIYRQ ENSP00000004980/1-644 EKSFPIKPVP SPSWSGSCRR SLLSPKKTQR RHVSTAEETV QEEEREIYRQ bmy_19770T0/1-523 EKSFPIKPVS SPSWSGSCRR NLLSPKKTQR RHISTAEETV QEEEREIYRQ ENSBTAP00000043264/1-645 EKSFPIKPVS SPSWSGACRR NLLSPKKTQR RHISTAEETV QEEEREIYRQ 251 300 ENSTTRP00000014647/1-673 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU007965/1-657 LLQMVTGKQF SVAKPTTHFP LHLSRCLSSS KNTLKDSLFK NGNSCATQII ENSP00000004980/1-644 LLQMVTGKQF TIAKPTTHFP LHLSRCLSSS KNTLKDSLFK NGNSCASQII bmy_19770T0/1-523 LLQMVTGKQF SVAKPTTHFP LHLSRCLSSS KNTLKDSLFK NGNSCATQII ENSBTAP00000043264/1-645 LLQIVTGKQF SIAKPTTHFP LHLSRCLSSS KNTLKDPLFK NGNSCATQII 301 350 ENSTTRP00000014647/1-673 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXV-AFGSKD SDPLHQPQHH BACU007965/1-657 GSDTSSSGSA SILTAQEQLS HNVFSISSYT PDVVAFGSKD SDPLHQPQHH ENSP00000004980/1-644 GSDTSSSGSA SILTNQEQLS HSVYSLSSYT PDV-AFGSKD SGTLHHPHHH bmy_19770T0/1-523 GSDTSSSGSA SILTAQEQLS HNVFSISSYT PDVVAFGSKD SDPLHQPQHH ENSBTAP00000043264/1-645 GSDTSSSGSA SILTAQEQLS HSVFSLPSYT PDAGTFGSKD SDPVHQPEHD 351 400 ENSTTRP00000014647/1-673 HSLSHQPDNL PASNTQSEGS DSVILLKVKD SQTPTPSPTF FQAELWIKEL BACU007965/1-657 HSLSHQPDNL PASNTQSEGS DSVILLKVKD SQTPTPR--- ---------- ENSP00000004980/1-644 HSVPHQPDNL AASNTQSEGS DSVILLKVKD SQTPTPSSTF FQAELWIKEL bmy_19770T0/1-523 HSLSHQPDNL PTSNTQSEGS DSVILLKVKD SQTPTPSPTF FQAELWIKEL ENSBTAP00000043264/1-645 HSLSYQADNL PASNTESEGS DSVILLKVKD SQIPTPSPTF FQAELWIKEL 401 450 ENSTTRP00000014647/1-673 TSVYDSRARE RLRQIEEQKA LALQLQNQRL QEQEHSVHDS VELHLRVPLE BACU007965/1-657 TSVYDSRARE RLRQIEEQKA LALQLQNQRL QEQEHSVHDS VELHLRVPLE ENSP00000004980/1-644 TSVYDSRARE RLRQIEEQKA LALQLQNQRL QEREHSVHDS VELHLRVPLE bmy_19770T0/1-523 TSVYDSRARE RLRQIEEQKA LALQLQNQRL QEQEHSVHDS VELHLRVPLE ENSBTAP00000043264/1-645 TSVYDSRARE RLRQIEEQKA LALQLQNQRL QEQEHSVHDS VELHLRVPLE 451 500 ENSTTRP00000014647/1-673 KEIPVTIAQE TGKKGHKLTE SEDEFPEITE EMEKEIKNVF RNGNQDEVLS BACU007965/1-657 KEIPVTIAQE TGKKGHKLTQ SEDEFPEITE EMEKEIKNVF RNGNQDEVLS ENSP00000004980/1-644 KEIPVTVVQE TQKKGHKLTD SEDEFPEITE EMEKEIKNVF RNGNQDEVLS bmy_19770T0/1-523 KEIPVTIAQE TGKKGHKLTQ SIDEFPEITE EMEKEIKNVF RNGNQDEVLS ENSBTAP00000043264/1-645 KEIPVTIAQE TGKKGHKLTD SEDEFPEITE EMEKEIKNVF RNGNQDEVLS 501 550 ENSTTRP00000014647/1-673 EAFRLTITRK DIQTLNHLNW LNDEXXXXXX XXXXXXXXXX XXXXXXXXXX BACU007965/1-657 EAFRLTITRK DIQTLNHLNW LNDEIINFYM NMLMERSKEK GLPSVHAFNT ENSP00000004980/1-644 EAFRLTITRK DIQTLNHLNW LNDEIINFYM NMLMERSKEK GLPSVHAFNT bmy_19770T0/1-523 EAFRLTITRK DIQTLNHLNW LNDEVISH-- ---------- ---------- ENSBTAP00000043264/1-645 EAFRLTITRK DIQTLNHLNW LNDEIINFYM NMLMERSKEK GLPSVHAFNT 551 600 ENSTTRP00000014647/1-673 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XAVVDFRKKN BACU007965/1-657 FFFTKLKTAG YQAVKRWTKK VDVFSVDILL VPIHLGVHWC LAVVDFRKKN ENSP00000004980/1-644 FFFTKLKTAG YQAVKRWTKK VDVFSVDILL VPIHLGVHWC LAVVDFRKKN bmy_19770T0/1-523 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043264/1-645 FFFTKLKTAG YQAVKRWTKK VDVFSVDILL VPIHLGVHWC LAVVDFRKKN 601 650 ENSTTRP00000014647/1-673 ITYYDSMGGI NNEACRILLQ YLKQESIDKK RKEFDTNGWQ LFSKKSQ-IP BACU007965/1-657 ITYYDSMGGI NNEACRILLQ YLKQESIDKK RKEFDTNGWQ LFSKKSQEIP ENSP00000004980/1-644 ITYYDSMGGI NNEACRILLQ YLKQESIDKK RKEFDTNGWQ LFSKKSQEIP bmy_19770T0/1-523 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043264/1-645 ITYYDSMGGI NNEACRILMQ YLKQESIDKK RKEFDANGWQ LFSKKSQEIP 651 700 ENSTTRP00000014647/1-673 QQMNGSDCGM -ACKYADCIT KDRPINFTQQ HMPYFRKRMV WEILHRKLL BACU007965/1-657 QQMNGSDCGM FACKYADCIT KDRPINFTQQ HMPYFRKRMV WEILHRKLL ENSP00000004980/1-644 QQMNGSDCGM FACKYADCIT KDRPINFTQQ HMPYFRKRMV WEILHRKLL bmy_19770T0/1-523 ---------- ---------- ---------- ---------- --------- ENSBTAP00000043264/1-645 QQMNGSDCGM FACKYADCIT KDRPINFTQQ HMPYFRKRMV WEILHRKLL