KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:54:34 2014 Check: 00 .. Name: ENSP00000273286/1-345 Len: 364 Check: 6610 Weight: 1.00 Name: ENSBTAP00000043299/1-340 Len: 364 Check: 1183 Weight: 1.00 Name: bmy_10120T0/1-345 Len: 364 Check: 6660 Weight: 1.00 Name: BACU005583/1-335 Len: 364 Check: 3099 Weight: 1.00 // 1 50 ENSP00000273286/1-345 ---------- ---------M KGELLLFSSV IVLLQVVCSC PDKCYCQSST ENSBTAP00000043299/1-340 LLEPQIEDPR RASPNLTWVD TAWLIKCFSM IFLLPVVCGC PERCRCHSPS bmy_10120T0/1-345 ---------- ---------M EGELLLLSSM IFLLPVVCGC PERCRCHSPS BACU005583/1-335 ---------- ---------- ---------M IFLLPVVCGC PERCRCHSPS 51 100 ENSP00000273286/1-345 NFVDCSQQGL AEIPSHLPPQ TRTLHLQDNQ IHHLPAFAFR SVPWLMTLNL ENSBTAP00000043299/1-340 NSVDCSRQGL AEIPSDLPPQ TLTLHLQDNQ IHQLPTSAFK SVPHLTTLNL bmy_10120T0/1-345 NFVDCSRQGL AEVPSDLPPQ TLTLHLQDNQ IRQLPASAFK SVPQLTTLNL BACU005583/1-335 NFVDCSRQGL AEVPSDLPPQ TLTLHLQDNQ IRQLPASAFK SVPQLTTLNL 101 150 ENSP00000273286/1-345 SNNSLSNLAP GAFHGLQHLQ VLNLTQNSLL SLESRLFHSL PQLRELDLSS ENSBTAP00000043299/1-340 YNNSLSNLTP GVFHGLQHLQ VLNLTQNSLH SLESRLFHSL PQLRELDLSS bmy_10120T0/1-345 YNNSLSNLTS GVFHGLQHLR VLNLTQNSLH SLESRLFHSL PQLRELDLSS BACU005583/1-335 YNNSLSNLTS GVFHGLQHLR VLNLTQNSLH SLESRLFHSL PQLRELDLSS 151 200 ENSP00000273286/1-345 NNISHLPTSL GETWENLTIL AVQQNQLQQL DRALLESMPS VRLLLLKDNL ENSBTAP00000043299/1-340 NNISHLPASL GESWENLTVL AIQQNRLRQL DRALLESMPR MKRLFLKDNL bmy_10120T0/1-345 NNISHRPTSL GEPWENLTVF AIQQNQLQQL DRALLESMPR VRHLFLKDNL BACU005583/1-335 NNISHLPTSL GEPWENLTVF AIQQNQLQQL DRALLESMPR VRHLFLKDNL 201 250 ENSP00000273286/1-345 WKCNCHLLGL KLWLEKFVYK GGLTDGIICE SPDTWKGKDL LRIPHELYQP ENSBTAP00000043299/1-340 WKCNCHLLSL KLWLETFVYK GGITDNIICV SPDAWKGKDL REIPHELYHP bmy_10120T0/1-345 WKCNCHLLSL KLWLETFIYK GGITDSIICA SPDTWKGKDL LKIPHELYQP BACU005583/1-335 WKCNCHLLSL KLWLETFIYK GGITDSIICA SPDTWKGKDL LKIPHELYQP 251 300 ENSP00000273286/1-345 CPLPAPDPVS SQAQWPGSAH GVVLRPPENH NAGERELLEC ELKPKPRPAN ENSBTAP00000043299/1-340 CPFPSLHLQS SQVPQLGAAR RAVPRLSDSH STGERDHREC EIKPKPRPAN bmy_10120T0/1-345 CPFPSPDLES SQVQQLGAAH RAVPRPPESH SSGERDHWGC DIKPKPRPAN BACU005583/1-335 CPFPSPDLQS SQVQQLGAAH RAVPRPPESH SSGERDHWGC EIKPKPRPAS 301 350 ENSP00000273286/1-345 LRHAIATVII TGVVCGIVCL MMLAAAIYGC TYAAITAQYH GGPLAQTNDP ENSBTAP00000043299/1-340 LRHAVATIVI TGVVCGIVCL MMLAAAIYGC TYAAITAQDH ---------- bmy_10120T0/1-345 LRHAVATIVI AGVVCGIVCL MMLAAAIYGC TYAAITAQYH GGRLAQINEP BACU005583/1-335 LRHAMATIVI AGVVCGIVCL MMLAAAIYGC TYAAITAQYH GGRLAQINEP 351 400 ENSP00000273286/1-345 GKVEEKERFD SSPA ENSBTAP00000043299/1-340 ---------- ---- bmy_10120T0/1-345 AKTEGKELFD SSTA BACU005583/1-335 AKTEGKELFD SSTA