KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:34 2014 Check: 00 .. Name: ENSP00000339992/1-761 Len: 832 Check: 5253 Weight: 1.00 Name: ENSBTAP00000043305/1-640 Len: 832 Check: 9336 Weight: 1.00 Name: BACU014327/1-796 Len: 832 Check: 6895 Weight: 1.00 Name: bmy_12340T0/1-750 Len: 832 Check: 1541 Weight: 1.00 Name: ENSTTRP00000003492/1-761 Len: 832 Check: 3539 Weight: 1.00 // 1 50 ENSP00000339992/1-761 ---------- ---------- ---------- -MARRP---- ---------- ENSBTAP00000043305/1-640 ---------- ---------- ---------- -MARRP---- ---------- BACU014327/1-796 MVAMPNAYRL GFVAMTSRGH HQELRETQKG KRFKRPNVCC GRKNKNKKKV bmy_12340T0/1-750 ---------- ---------- ---------- -MARRP---- ---------- ENSTTRP00000003492/1-761 ---------- ---------- ---------- -MARRP---- ---------- 51 100 ENSP00000339992/1-761 ---------- RH-------- --------SI YSSDEDDEDF EMCDHDYDGL ENSBTAP00000043305/1-640 ---------- RH-------- --------SI YSSDEDDEDI EMCDHDYDGL BACU014327/1-796 TLIFLNLSLK KEGEGEEITE FINILRFDCI YSSDEDDEDI EMCDHDYDGL bmy_12340T0/1-750 ---------- RHSLNPLVSV HICPFFFCSI YSSDEDDEDI EMCDHDYDGL ENSTTRP00000003492/1-761 ---------- RH-------- --------SI YSSDEDDEDI EMCDHDYDGL 101 150 ENSP00000339992/1-761 LPKSGKRHLG KTRWTREEDE KLKKLVEQNG TDDWKVIANY LPNRTDVQCQ ENSBTAP00000043305/1-640 LPKSGKRHLG KTRWTREEDE KLKKLVEQNG TDDWKVIANY LPNRTDVQCQ BACU014327/1-796 LPKSGKRHLG KTRWTREEDE KLKKLVEQNG TDDWKVIANY LPNRTDVQCQ bmy_12340T0/1-750 LPKSGKRHLG KTRWTREEDE KLKKLVEQNG TDDWKVIANY LPNRTDVQCQ ENSTTRP00000003492/1-761 LPKSGKRHLG KTRWTREEDE KLKKLVEQNG TDDWKVIANY LPNRTDVQCQ 151 200 ENSP00000339992/1-761 HRWQKVLNPE LIKGPWTKEE DQRVIELVQK YGPKRWSVIA KHLKGRIGKQ ENSBTAP00000043305/1-640 HRWQKVLNPE LIKGPWTKEE DQRVIELVQK YGPKRWSVIA KHLKGRIGKQ BACU014327/1-796 HRWQKVLNPE LIKGPWTKEE DQRVIELVQK YGPKRWSVIA KHLKGRIGKQ bmy_12340T0/1-750 HRWQKVLNPE LIKGPWTKEE DQRVIELVQK YGPKRWSVIA KHLKGRIGKQ ENSTTRP00000003492/1-761 HRWQKVLNPE LIKGPWTKEE DQRVIELVQK YGPKRWSVIA KHLKGRIGKQ 201 250 ENSP00000339992/1-761 CRERWHNHLN PEVKKTSWTE EEDRIIYQAH KRLGNRWAEI AKLLPGRTDN ENSBTAP00000043305/1-640 CRERWHNHLN PEVKKTSWTE EEDRIIYQAH KRLGNRWAEI AKLLPGRTDN BACU014327/1-796 CRERWHNHLN PEVKKTSWTE EEDRIIYQAH KRLGNRWAEI AKLLPGRTDN bmy_12340T0/1-750 CRERWHNHLN PEVKKTSWTE EEDRIIYQAH KRLGNRWAEI AKLLPGRTDN ENSTTRP00000003492/1-761 CRERWHNHLN PEVKKTSWTE EEDRIIYQAH KRLGNRWAEI AKLLPGRTDN 251 300 ENSP00000339992/1-761 AIKNHWNSTM RRKVEQEGYL QESSKASQPA VATSFQKNSH LMGFAQAPPT ENSBTAP00000043305/1-640 AIKNHWNSTM RRKVEQEGYL QESSKASQPP VTTSFQKNSH LMGFTHAPPS BACU014327/1-796 AIKNHWNSTM RRKVEQEGYL QESSKASQPP VATSFQKNSH LMGFAHALPS bmy_12340T0/1-750 AIKNHWNSTM RRKVEQEGYL QESSKTSQPP VATSFQKNSH LMGFAHALPS ENSTTRP00000003492/1-761 AIKNHWNSTM RRKVEQEGYL QESSKASQPP VATSFQKNSH LMGFAHALPS 301 350 ENSP00000339992/1-761 AQLPATGQPT VNNDYSYYHI SEAQNVSSHV PYPVALHVNI VNVPQPAAAA ENSBTAP00000043305/1-640 AQLPPAGQPS VNSDYPYYHI SEAQNVSSHV PYPVALHVNI VNVPQPAAAA BACU014327/1-796 AQLPPTGQPS VNNDYSYYHV SEAQNVSSHV PYPVALHVNI VNVPQPAAAA bmy_12340T0/1-750 AQLPPTGQPS VNNDYSYYHV SEAQN----- ---------- ---------- ENSTTRP00000003492/1-761 AQLPPTGQPS VNNDYSYYHV SEAQNVSSHV PYPVALHVNI VNVPQPAAAA 351 400 ENSP00000339992/1-761 IQRHYNDEDP EKEKRIKELE LLLMSTENEL KGQQVLPTQN HTCSYPGWHS ENSBTAP00000043305/1-640 IQRHYNDEDP EKEKRIKELE LLLMSTENEL KGQQALPTQN HTCSYPGWHS BACU014327/1-796 IQRHYNDEDP EKEKRIKELE LLLMSTENEL KGQQAVPTQN HTCSYPGWHS bmy_12340T0/1-750 --RHYNDEDP EKEKRIKELE LLLMSTENEL KGQQAVPTQN HTCSYPGWHS ENSTTRP00000003492/1-761 IQRHYNDEDP EKEKRIKELE LLLMSTENEL KGQQALPTQN HTCSYPGWHS 401 450 ENSP00000339992/1-761 TTIADHTRPH GDSAPVSCLG EHHSTPSLPA DPGSLPEESA SPARCMIVHQ ENSBTAP00000043305/1-640 TTIADHTRPH GDSAPVSCLE EHHSTPSLPA DPGSLPEESA SPARCMIFHQ BACU014327/1-796 TTIADHTRPH GDSAPVSCLE DHHSTPSLPV DPGSLPEESA SPARCMIVHQ bmy_12340T0/1-750 TTIADHTRPH GDSAPVSCLE DHHSTPSLPV DPGSLPEESA SPARCMIVHQ ENSTTRP00000003492/1-761 TTIADHTRPH GDSAPVSCLE DHHSTPSLPV DPGSLPEESA SPARCMIVHQ 451 500 ENSP00000339992/1-761 GTILDNVKNL LEFAETLQFI DSDSSSWCDL SSFEFFEEAD FSPSQHHTGK ENSBTAP00000043305/1-640 STILDNVKNL LEFAETLQFI DS-------- ---------- ---------- BACU014327/1-796 GTILDNVKNL LEFAETLQFI DSDPSSWGDL SSFEFFEEAA FSPSQHHAGK bmy_12340T0/1-750 GTILDNVKNL LEFAETLQFI DSDPSSWGDL SSFEFFEEAA FSPSQHHAGK ENSTTRP00000003492/1-761 GTILDNVKNL LEFAETLQFI DSDPSSWGDL SSFEFFEEAA FSPSQHHAGK 501 550 ENSP00000339992/1-761 ALQLQQREGN GTKPAGEPSP RVNKRMLSES SLDPPKVLPP ARHSTIPLVI ENSBTAP00000043305/1-640 ---------- ---------- ---------- ---------- ---------- BACU014327/1-796 ALQLQQREGN VNRPAGEPST RANKRKLSEG SLDLPKPFPP ARPSTIPWVI bmy_12340T0/1-750 ALQLQQREGN VNRPAGEPST RANKRKLSEG SLDLPKPFPP ARPSAIPRVI ENSTTRP00000003492/1-761 ALQLQQREGN VNRPAGEPSK RANKRKLSEG SLDLPKPFPP ARPSTIPRVI 551 600 ENSP00000339992/1-761 LRKKRGQASP LATGDCSSFI FADVSSSTPK RSPVKSLPFS PSQFLNTSSN ENSBTAP00000043305/1-640 ---------- ---------- ---------- ---------- ---FLNTSNN BACU014327/1-796 LRKKRGQASP IATGHSSSLI FADVSSSTPK RSPVKSLPFS PSQFLNTSNN bmy_12340T0/1-750 LRKKRGQASP IATGHSSSLI FADVSSSTPK RSPVKSLPFS PSQFLNTSNN ENSTTRP00000003492/1-761 LRKKRGQASP IATGHSSSLI FADVSSSTPK RSLVKSLPFS PSQFLNTSNN 601 650 ENSP00000339992/1-761 HENSDLEMPS LTSTPLIGHK LTVTTPFHRD QTVKTQKENT VFRTPAIKRS ENSBTAP00000043305/1-640 HENLDLEMPS LTSTPLNGHK LTVTTPFHRD QTVKIQKENT IFRTPAIKRS BACU014327/1-796 HENLDLEMPS LTSTPLNGHK LTVTTPFHRD QTVKTQKENT IFRTPAIKRS bmy_12340T0/1-750 HENLDLEMPS LTSTPLNGHK LTVTTPFHRD QTVKTQKENT IFRTPAIKRS ENSTTRP00000003492/1-761 HENLDLEMPS LTSTPLNGHK LTVTTPFHRD QTVKTQKENT IFRTPAIKRS 651 700 ENSP00000339992/1-761 ILESSPRTPT PFKHALAAQE IKYGPLKMLP QTPSHLVEDL QDVIKQESDE ENSBTAP00000043305/1-640 ILESSPRTPT PFKHALTAQE IKYGPLKMLP QTPSHLVEDL QDVIKQESDE BACU014327/1-796 ILESSPRTPT PFKHALAAQE IKYGPLKMLP QTPSHLVEDL QDVIKQESDE bmy_12340T0/1-750 ILESSPRTPT PFKHALAAQE IKYGPLKMLP QTPSHLVEDL QDVIKQESDE ENSTTRP00000003492/1-761 ILESSPRTPT PFKHALAAQE IKYGPLKMLP QTPSHLVEDL QDVIKQESDE 701 750 ENSP00000339992/1-761 SGIVAEFQEN GPPLLKKIKQ EVESPTDKSG NFFCSHHWEG DSLNTQLFTQ ENSBTAP00000043305/1-640 SGIVAEFQEN GQPLLKKIKQ EVESPTDKAG NFFCSNHWEG DSLNTQLFTQ BACU014327/1-796 SGIVAEFQEN GPPLLKKIKQ EVESPTDKAG NFFCSDHWEG ESLNTQLFSQ bmy_12340T0/1-750 SGIVAEFQEN GPPLLKKIKQ EVESPTDKAG NFFCSDHWEG ESLNTQLFSQ ENSTTRP00000003492/1-761 SGIVAEFQEN GPPLLKKIKQ EVESPTDKTG NFFCSDHWEG ESLNTQLFTQ 751 800 ENSP00000339992/1-761 TSPVADAPNI LTSSVLMAPA SEDEDNVLKA FTVPKNRSLA SPLQPCSSTW ENSBTAP00000043305/1-640 ASPVADMPNI LTSSVLMTPV SEDEDNVLKA FTVPKSRSLA SPLQPCNGAW BACU014327/1-796 ASPVADVP-- ---------- ---------- ---------- ----PCSGAW bmy_12340T0/1-750 ASPVADVPNI LTSSVLMTPV SEDEDKVLKA FTVPKNRSLA SPLQPCSGAW ENSTTRP00000003492/1-761 ASPVADVPNI LTSSVLMTPV SEDEDNVLKA FTVPKNRSLA SPLQPCSGAW 801 850 ENSP00000339992/1-761 EPASCGKMEE QMTSSSQARK YVNAFSARTL VM ENSBTAP00000043305/1-640 ESASCGKTDD QMTASGQSRK YVNAFSTRTL VM BACU014327/1-796 ETASCGKTDD QMTASGQARK YVNAFSTRTL VM bmy_12340T0/1-750 ETASCGKTDD QMTASGQARK YVNAFSTRTL VM ENSTTRP00000003492/1-761 ETASCGKTDD QMTASGQTRK YVNAFSTRTL VM