KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:35 2014 Check: 00 .. Name: ENSBTAP00000043329/1-470 Len: 470 Check: 2526 Weight: 1.00 Name: bmy_17520T0/1-350 Len: 470 Check: 27 Weight: 1.00 Name: ENSP00000287020/1-455 Len: 470 Check: 511 Weight: 1.00 Name: ENSTTRP00000011723/1-458 Len: 470 Check: 6608 Weight: 1.00 Name: BACU000505/1-49 Len: 470 Check: 8508 Weight: 1.00 // 1 50 ENSBTAP00000043329/1-470 MDTSRVLLSA VFLISFLWDL PGFQQASISS SSSSAELGSA KGMRSRKEGR bmy_17520T0/1-350 ---------- ---------- ---------- ---------- ---------- ENSP00000287020/1-455 MDTPRVLLSA VFLISFLWDL PGFQQASISS SSSSAELGST KGMRSRKEGK ENSTTRP00000011723/1-458 MDTPRVLLSA VFLISFLWDL PGFQQASISS SSSSTQLGSA KGMRSRKEGK BACU000505/1-49 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000043329/1-470 MPRAPRENAT AREPLDRQEP PPRPQEEPQR RPPQQPEARE PPGRGPRVVP bmy_17520T0/1-350 ---------- -----MGEEA CGRRCEE--- ---------- ---------- ENSP00000287020/1-455 MQRAPRDSDA GR---EGQEP QPRPQDEPR- --AQQPRAQE PPGRGPRVVP ENSTTRP00000011723/1-458 MPRASRESAT AR---GGQEP QPRPQEEPRR RPPQQPEAQE PPGRGPRVVP BACU000505/1-49 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000043329/1-470 HEYMLSIYRT YSIAEKLGIN ASFFQSSKSA NTITSFVDRG LDDLSHTPLR bmy_17520T0/1-350 ----LASYPQ MAMAAGPGLV MP-------- ---------- -DDLSHTPLR ENSP00000287020/1-455 HEYMLSIYRT YSIAEKLGIN ASFFQSSKSA NTITSFVDRG LDDLSHTPLR ENSTTRP00000011723/1-458 HEYMLSIYRT YSIAEKLGIN ASFFQSSKSA NTITSFVDRG LDDLSHTPLR BACU000505/1-49 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000043329/1-470 RQKYLFDVST LSDKEELVGA ELRLFRQAPA APWGPPAGPL RLQLFACQSP bmy_17520T0/1-350 RQKYLFDVST LSDKEELVGA ELRLFRQAPA APWGPPAGPL QVQLFPCLSP ENSP00000287020/1-455 RQKYLFDVSM LSDKEELVGA ELRLFRQAPS APWGPPAGPL HVQLFPCLSP ENSTTRP00000011723/1-458 RQKYLFDVST LSDKEELVGA ELRLFRQAPA APWGPPAGPL QVQLFPCLSP BACU000505/1-49 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000043329/1-470 LLLEARSLDP QGAPRPGWEV FDVWRGLRPQ PWKQLCLELR AAWGGEPGAA bmy_17520T0/1-350 LLLDARTLDP QGAPRAGWEV FDVWQGLRHQ PWEQLCLELR VAW-GEPGAG ENSP00000287020/1-455 LLLDARTLDP QGAPPAGWEV FDVWQGLRHQ PWKQLCLELR AAW-GELDAG ENSTTRP00000011723/1-458 LLLDARTLDP QGAPRPGWEV FDVWQVLRHQ PREQLCLELR VAW-GEQGAG BACU000505/1-49 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000043329/1-470 EDEARAPGPQ QPPPPDLRSL GFGRRVRTPQ ERALLVVFSR SQRKTLFAEM bmy_17520T0/1-350 EAEARAPGLQ QPPPPDLRSL GFGRRVRTPQ ERALLVVFTR SQRKNLFAEM ENSP00000287020/1-455 EAEARARGPQ QPPPPDLRSL GFGRRVRPPQ ERALLVVFTR SQRKNLFAEM ENSTTRP00000011723/1-458 EAEARAPGLQ QPPPPDLRSL GFGRRVRTSQ ERALLVMFTR SQRKNLFAEM BACU000505/1-49 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000043329/1-470 REQLGSATEV VGPGGGAEGS GPPPPPPPPP PSGTPDAGLW SPSPGRRRRR bmy_17520T0/1-350 REQLGSA-EV AGPGAGAEGS -------WPP PSGTPDAGSW LPSPGRRRRR ENSP00000287020/1-455 REQLGSA-EA AGPGAGAEGS -------WPP PSGAPDARPW LPSPGRRRRR ENSTTRP00000011723/1-458 REQLDSA-EV AGPGASAEES -------WPP PSGTPDARSW LPSPGRRRRR BACU000505/1-49 ---------- ---------- ---------- ---------- ---------- 351 400 ENSBTAP00000043329/1-470 TAFASRHGKR HGKKSRLRCS KKPLHVNFKE LGWDDWIIAP LEYEAYHCEG bmy_17520T0/1-350 TAFASRHGKR HGKKSRLRCS KKPLHVNFKE LGWDDWIIAP LEYEAYHCEG ENSP00000287020/1-455 TAFASRHGKR HGKKSRLRCS KKPLHVNFKE LGWDDWIIAP LEYEAYHCEG ENSTTRP00000011723/1-458 TAFASRHGKR HGKKSRLRCS KKPLHVNFKE LGWDDWIIAP LEYEAYHCEG BACU000505/1-49 ---------- ---------- ---------- ---------- ---------- 401 450 ENSBTAP00000043329/1-470 VCDFPLRSHL EPTNHAIIQT LMNSMDPGST PPSCCVPTKL TPISILYIDA bmy_17520T0/1-350 VCDFPLRSHL EPTNHAIIQT LMNSMDPGST PPSCCVPTKL TPISILYIDA ENSP00000287020/1-455 VCDFPLRSHL EPTNHAIIQT LMNSMDPGST PPSCCVPTKL TPISILYIDA ENSTTRP00000011723/1-458 VCDFPLRSHL EPTNHAIIQT LMNSMDPGST PPSCCVPTKL TPISILYIDA BACU000505/1-49 ---------- ---------- -MNSMDPGST PPSCCVPTKL TPISILYIDA 451 500 ENSBTAP00000043329/1-470 GNNVVYKQYE EMVVESCGCR bmy_17520T0/1-350 GNNVVYKQYE DMVVESCGCR ENSP00000287020/1-455 GNNVVYKQYE DMVVESCGCR ENSTTRP00000011723/1-458 GNNVVYKQYE DMVVESCGCR BACU000505/1-49 GNNVVYKQYE DMVVESCGCR