KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:35 2014 Check: 00 .. Name: ENSP00000222214/1-438 Len: 455 Check: 1153 Weight: 1.00 Name: ENSBTAP00000043333/1-438 Len: 455 Check: 1326 Weight: 1.00 Name: BACU003988/1-455 Len: 455 Check: 2635 Weight: 1.00 Name: ENSTTRP00000003372/1-436 Len: 455 Check: 4096 Weight: 1.00 Name: bmy_04862T0/1-417 Len: 455 Check: 7933 Weight: 1.00 // 1 50 ENSP00000222214/1-438 MALRGVSVRL LSRGPGLHVL RTWVSSAAQT EKGGRTQSQL AK-------S ENSBTAP00000043333/1-438 MALRGVYAQL LNRGPGLRVF RSWSSATAQT EKGEKTQSRS AK-------P BACU003988/1-455 MALRGVYARL LSCGPSLRVL RSWSSAATQT EKGGKTQSRS AKCKDPLSRP ENSTTRP00000003372/1-436 MALRGVYGWL LSRESSLRVL RSWSSAATQT EKGGKTQSRS AK-------S bmy_04862T0/1-417 MALRGVYARL LSRGPSLRVL RSRSSAATQT EKGGKTQSRS AK-------S 51 100 ENSP00000222214/1-438 SRPEFDWQDP LVLEEQLTTD EILIRDTFRT YCQERLMPRI LLANRNEVFH ENSBTAP00000043333/1-438 SRPEFDWRDP LLLEEQLTAD EILIRDTFRT YCQERLMPRI LLANRNEVFH BACU003988/1-455 SRPEFDWRDP LLLEEQLTAD EVLIRDTFRT YCQERLMPRI LLANRNEVFH ENSTTRP00000003372/1-436 SRPEFDWRDP LLLEEQLTAD EVLIRDTFRT YCQERLMPRI LLANRNEVFH bmy_04862T0/1-417 SRPEFDWRDP LLLEEQLTAD EVLIRDTFRT YCQERLMPRI LLANRNE--- 101 150 ENSP00000222214/1-438 REIISEMGEL GVLGPTIKGY GCAGVSSVAY GLLARELERV DSGYRSAMSV ENSBTAP00000043333/1-438 REIISEMGEL GMLGPTIQGY SCAGVSSVAY GLLARELERV DSGYRSAMSV BACU003988/1-455 REIISEMGEL GVLGPTIKGY GCAGVSSVAY GLLARELERV DSGYRSAMSV ENSTTRP00000003372/1-436 REIISEMGEL GVLGPTIKGY GCAGVSSVAY GLLARELERV DSGYRSAMSV bmy_04862T0/1-417 ---------- --------GY GCAGVSSVAY GLLARELERV DSGYRSAMSV 151 200 ENSP00000222214/1-438 QSSLVMHPIY AYGSEEQRQK YLPQLAKGEL LGCFGLTEPN SGSDPSSMET ENSBTAP00000043333/1-438 QSSLVMYPIY AYGSEEQKQK YLPRLAKGEL LGCFGLTEPN HGSDPSGMET BACU003988/1-455 QSSLVMHPIY AYGSEEQQQK YLPRLAKGEL LGCFGLTEPN HGSDPGSMET ENSTTRP00000003372/1-436 QSSLVMHPIY AYGSEEQQQK YLPRLAKGEL LGCFGLTEPN HGSDPGSMET bmy_04862T0/1-417 QSSLVMHPIY AYGSEEQQQK YLPRLAKGEL LGCFGLTEPN HGSDPGSMET 201 250 ENSP00000222214/1-438 RAHYNSSNKS YTLNGTKTWI TNSPMADLFV VWARCEDGCI RGFLLEKGMR ENSBTAP00000043333/1-438 RARHNPSSRS YILSGSKTWI TNSPVADLLI VWARCEDSCI RGFLLEKGMR BACU003988/1-455 RARHNPSGRS YTLNGAKTWI TNSPVADLFV VWARCEDSCI RGFLLEKGMR ENSTTRP00000003372/1-436 RARQNPSGRS YTLNGAKTWI TNSPVADLFV VWARCEDSCI RGFLLEKGMR bmy_04862T0/1-417 RARHNPSGRS YTLNGAKTWI TNSPVADLFV VWARCEDSCI RGFLLEKGMR 251 300 ENSP00000222214/1-438 GLSAPRIQGK FSLRASATGM IIMDGVEVPE ENVLPGASSL GGPFGCLNNA ENSBTAP00000043333/1-438 GLSTPRIEGK FSLRASSTGM IIMDDVEVPE ENVLPGVSGL AGPFGCLNNA BACU003988/1-455 GLSAPKIEGK FSLRASATGM IIMDDVEVPE ENVLPKASGL AGPFGCLNNA ENSTTRP00000003372/1-436 GLSAPKIEGK FSLRASATGM IIMDDVKVPE ENVLPKASGL AGPFGCLNNA bmy_04862T0/1-417 GLSAPKIEGK FSLRASATGM IIMDDVEVPE ENVLPKASGL AGPFGCLNNA 301 350 ENSP00000222214/1-438 RYGIAWGVLG ASEFCLHTAR QYALDRMQFG VPLARNQLIQ KKLADMLTEI ENSBTAP00000043333/1-438 RYGITWGVLG AAEFCLHTAR QYTLDRIQFG VPLAKNQLIQ KKLADMLTEI BACU003988/1-455 RYGITWGVLG AAEFCLHTAR QYTLDRIQFG VPLAKNQLIQ KKLADMLTEI ENSTTRP00000003372/1-436 RYGIAWGVLG AAEFCLHTAR QYTLDRIQIG VSLAKNQLIH MNLADMLTEI bmy_04862T0/1-417 RYGITWGVLG AAEFCLHTAR QYTLDRIQFG VPLAKNQLIQ KKLADMLTEI 351 400 ENSP00000222214/1-438 TLGLHACLQL GRLKDQDKAA PEMVSLLKRN NCGKALDIAR QARDMLGGNG ENSBTAP00000043333/1-438 TLGLHACLQL GRLKDQDKAA PEMVSLLKRN NCGKALDIAR QARDMLGGNG BACU003988/1-455 TLGLHACLQL GRLKDQDKAT PEMISLLKRN NCGKALDIAR QARDMLGGNG ENSTTRP00000003372/1-436 TLG--HALQL GRLKDQDKAT PEMISLLKRN NCGKALDIAR QARDMLGGNG bmy_04862T0/1-417 TLGLHACLQL GRLKDQDKAT PEMISLLKRN NCGKALDIAR QARDMLGGNG 401 450 ENSP00000222214/1-438 ISDEYHVIRH AMNLEAVNTY EGTHDIH--- ---ALILGRA ITGIQAFTAS ENSBTAP00000043333/1-438 ISDEYHVIRH VMNLESVNTY EGTHDIH--- ---ALILGRA ITGIQAFVAG BACU003988/1-455 ISDEYHVIRH AMNLEAVNTY EGGGHIPGAG FTVASHLGKR TADPSPTPSC ENSTTRP00000003372/1-436 ISDEYHVIRH AMNLEAVNTY EGTHDIH--- ---ALILGRA ITGIQAFTAS bmy_04862T0/1-417 ISDEYHVIRH AMNLEAVNTY EGTHDIH--- ---ALILGRA ITGIQAFTAS 451 500 ENSP00000222214/1-438 K---- ENSBTAP00000043333/1-438 K---- BACU003988/1-455 HQSAA ENSTTRP00000003372/1-436 K---- bmy_04862T0/1-417 K----