KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:36 2014 Check: 00 .. Name: ENSP00000264834/1-362 Len: 374 Check: 7605 Weight: 1.00 Name: ENSBTAP00000043340/1-372 Len: 374 Check: 1916 Weight: 1.00 Name: ENSTTRP00000003371/1-367 Len: 374 Check: 2094 Weight: 1.00 Name: bmy_04863T0/1-367 Len: 374 Check: 9772 Weight: 1.00 Name: BACU003987/1-367 Len: 374 Check: 9898 Weight: 1.00 // 1 50 ENSP00000264834/1-362 MATAETALPS ISTLTALGPF PDTQDDFLKW WRSEEAQDMG PGPPDPTEPP ENSBTAP00000043340/1-372 MAAAETALPS ISTLTALGPF SDTQEDILKW WRSEDVQDLG PGPPDHTGPP ENSTTRP00000003371/1-367 MAAAETALPS ISTLTTLGPF LDTQEDFLKW WRSEEVQDLG PGPPDPTGPP bmy_04863T0/1-367 MAAAETALPS ISTLTTLGPF LDTQEDFLKW WRSEEVQDLG PGPPDPTGPP BACU003987/1-367 MAAAETALPS ISTLTTLGPF LDTQEDFLKW WRSEEVQDLG PGPPDPTGPP 51 100 ENSP00000264834/1-362 LHVKS--EDQ PGEEEDDERG ADATWDLDLL LTNFSGPEPG GAPQT----- ENSBTAP00000043340/1-372 LHVRPELEDA PGEDEDDDRD AATPWDLDLL FTNFPCPEPG GAPQTCAPQT ENSTTRP00000003371/1-367 LHVRPELEDT PGEDEDDERD AATPWDLDLL LTNFPCPEPG TAPQTCVPQT bmy_04863T0/1-367 LHVRPELEDT PGEDEDDERD AATPWDLDLL LTNFPCPEPG SAPQTCVPQT BACU003987/1-367 LHVRPELEDT PGEDEDDERD AATPWDLDLL LTNFPCPEPG SAPQTCVPQT 101 150 ENSP00000264834/1-362 -----CALAP SEASGAQYPP PPETLGAYAG GPGLVAGLLG SEDHSGWVRP ENSBTAP00000043340/1-372 CAPQACALAP SEGSGAQFPP PPETLGAYAG GPGLVAGLLG PEEHLGWARP ENSTTRP00000003371/1-367 -----CALAP GEGSGVQFPL PPETLGAYAG GPGLVAGLLG PEEHPGWARP bmy_04863T0/1-367 -----CALAP GEGSGVQFPL PPETLGAYAG GPGLVAGLLG PEEHPGWARP BACU003987/1-367 -----CALAP GEGSGVQFPL PPETLGAYAG GPGLVAGLLG PEDHPGWARP 151 200 ENSP00000264834/1-362 ALRARAPDAF VGPALAPAPA PEPKALALQP VYPGPGAGSS GGYFPRTGLS ENSBTAP00000043340/1-372 APRTPAPDTF VGPSL--IPT PEPKALPLQP LYPGPGSGSS GSYFPRTGLS ENSTTRP00000003371/1-367 TPRTPAPDAF VGPAL--IPA PEPKALPLQP MYPGPGAGSS SSYFPRTGLS bmy_04863T0/1-367 APRTPAPDAF VGPAL--IPA PEPKALPLQP MYPGPGAGSS GSYFPRTGLS BACU003987/1-367 APRTPAPDAF VGPAL--IPA PEPKALPLQP MYPGPGAGSS GSYFPRTGLS 201 250 ENSP00000264834/1-362 VPAASGAPYG LLSGYPAMYP APQYQGHFQL FRGLQGPAPG PATSPSFLSC ENSBTAP00000043340/1-372 VPAAPGAPYG LLSGYPALYP MPQYQGHFQL FRGLQAPAPG PPSPHSFLSC ENSTTRP00000003371/1-367 VPAAPGAPYG LLSGYPALYP MPQYQGHFQL FRGLQAPAPG PATPHSFLSC bmy_04863T0/1-367 VPAAPGAPYG LLSGYPALYP MPQYQGHFQL FRGLQAPAPG PATPHSFLSC BACU003987/1-367 VPAAPGAPYG LLSGYPALYP MPQYQGHFQL FRGLQAPAPG PATPHSFLSC 251 300 ENSP00000264834/1-362 LGPGTVGTGL GGTAEDPGVI AETAPSKRGR RSWARKRQAA HTCAHPGCGK ENSBTAP00000043340/1-372 LGPGTTGAGL GGTTGDPGGT TEAAPSKRSR RSWARKRQAA HTCTHPGCGK ENSTTRP00000003371/1-367 LGPGTTGAGL GGTTGDPGGT AEAAPPKRSR RSWARKRQAA HTCTHPGCGK bmy_04863T0/1-367 LGPGTTGAGL GGTTGDPGGT AEAAPSKRSR RSWARKRQAA HTCTHPGCGK BACU003987/1-367 LGPGTTGAGR GGTTGDPGGT AEAAPSKRSR RSWARKRQAA HTCTHPGCGK 301 350 ENSP00000264834/1-362 SYTKSSHLKA HLRTHTGEKP YACTWEGCGW RFARSDELTR HYRKHTGQRP ENSBTAP00000043340/1-372 SYTKSSHLKA HLRTHTGEKP YACTWDGCGW RFARSDELTR HYRKHTGQRP ENSTTRP00000003371/1-367 SYTKSSHLKA XXXXXXXEKP YACTWDGCGW RFARSDELTR HYRKHTGQRP bmy_04863T0/1-367 SYTKSSHLKA HLRTHTGEKP YACTWDGCGW RFARSDELTR HYRKHTGQRP BACU003987/1-367 SYTKSSHLKA HLRTHTGEKP YACTWDGCGW RFARSDELTR HYRKHTGQRP 351 400 ENSP00000264834/1-362 FRCQLCPRAF SRSDHLALHM KRHL ENSBTAP00000043340/1-372 FRCQLCSRAF SRSDHLALHM KRHL ENSTTRP00000003371/1-367 FRCQLCSRAF SRSDHLALHM KRHL bmy_04863T0/1-367 FRCQLCSRAF SRSDHLALHM KRHL BACU003987/1-367 FRCQLCSRAF SRSDHLALHM KRHL