KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:37 2014 Check: 00 .. Name: bmy_10866T0/1-534 Len: 535 Check: 1077 Weight: 1.00 Name: ENSP00000279206/1-303 Len: 535 Check: 1866 Weight: 1.00 Name: ENSBTAP00000043364/1-290 Len: 535 Check: 9381 Weight: 1.00 Name: BACU019689/1-290 Len: 535 Check: 8403 Weight: 1.00 Name: ENSTTRP00000009730/1-303 Len: 535 Check: 9294 Weight: 1.00 // 1 50 bmy_10866T0/1-534 MDPEVSLLLQ CPPGGLPEEQ VRAELSPAYD RRPLPGGDKA ITAVWESRLQ ENSP00000279206/1-303 MDPEVTLLLQ CPGGGLPQEQ IQAELSPAHD RRPLPGGDEA ITAIWETRLK ENSBTAP00000043364/1-290 MDPEVSLLLQ CPPGGLPEKQ VRAELSPAYD RRPLPGGDKA IIAIWESRLQ BACU019689/1-290 MDPEVSLLLQ CPPGGLPEEQ VRAELSAAYD RRPLPGGDKA ITAVWESRLQ ENSTTRP00000009730/1-303 MDPEVSLLLQ CPPGGLPEEQ VRAELSPAYD RRPLPGGDKA ITAVWESRLQ 51 100 bmy_10866T0/1-534 AQPWLFDAPK FRLHSATLVP TGSAGPQLHL CLGLTSYRDF LGTNWASSAA ENSP00000279206/1-303 AQPWLFDAPK FRLHSATLAP IGSRGPQLLL RLGLTSYRDF LGTNWSSSAA ENSBTAP00000043364/1-290 AQPWLFNAPK FRLHSATLAP TGLPGPQLLL RLGLTSYQDF LGTNWASSAA BACU019689/1-290 AQPWLFDAPK FRLHSATLVP TGSPGPQLHL CLGLTSYRDF LGTNWASSAA ENSTTRP00000009730/1-303 AQPWLFDAPK FRLHSATLVP TGSLGPQLHL CLGLTSYRDF LGTNWASSAA 101 150 bmy_10866T0/1-534 WLRQQGATDW GDKQAYLADP LGVGAALATA DDFLVFLRRS GQVAEATGLV ENSP00000279206/1-303 WLRQQGATDW GDTQAYLADP LGVGAALATA DDFLVFLRRS RQVAEAPGLV ENSBTAP00000043364/1-290 WLRQQGATDW GDKQAYLADP LGVGAALATA DDFLVFLRRS GQVAEAPGLV BACU019689/1-290 WLRQQGATDW GDKQAYLADP LGVGAALATA DDFLVFLRRS GQVAEATGLV ENSTTRP00000009730/1-303 WLRQQGATDW GDKQAYLADP LGVGAALATA DDFLVFLRRS GQVAEAPGLV 151 200 bmy_10866T0/1-534 DVPGGHPEPQ ALCPGDRPLH INLPGELVVH ELFSSVLQEI CDEVSERQVN ENSP00000279206/1-303 DVPGGHPEPQ ALCPGGSPQH QDLAGQLVVH ELFSSVLQEI CDE-----VN ENSBTAP00000043364/1-290 DVPGGHPEPQ ALCPGDSPLH KDLPGELVVH ELFSSVLQEI CDE-----VN BACU019689/1-290 DVPGGHPEPQ ALCPGDRPLH INLPGELVVH ELFSSVLQEI CDE-----VN ENSTTRP00000009730/1-303 DVPGGHPEPQ ALCPGGRPLH INLPGELVVH ELFSSVLQEI CDE-----VN 201 250 bmy_10866T0/1-534 LPLLTLSQPL LLGIACNETS AGRASAEFYV HCPPAFMLPL RLRRLWPHSP ENSP00000279206/1-303 LPLLTLSQPL LLGIARNETS AGRASAEFYV QCS------- ---------- ENSBTAP00000043364/1-290 VPPLTLSQPL LLGIACNETS AGRASAEFYV QCS------- ---------- BACU019689/1-290 LPLLTLSQPL LLGIACNETS AGRASAEFYV QCS------- ---------- ENSTTRP00000009730/1-303 LPLLTLSQPL LLGIACNETS AGRASAEFYV QCS------- ---------- 251 300 bmy_10866T0/1-534 PTRFFAAAAR QRSGPSNYYE LLGVHPGASA EEVKRAFFSK SKELHPDRDP ENSP00000279206/1-303 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043364/1-290 ---------- ---------- ---------- ---------- ---------- BACU019689/1-290 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009730/1-303 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_10866T0/1-534 RNPALHNRFV ELSEAYQVLS HEQSRRSYDH QLRSAASPKC PGTTAHPRSA ENSP00000279206/1-303 ---------- --------LT SEQVRKHYLS G--------- ---------- ENSBTAP00000043364/1-290 ---------- --------LT SEQVRRHYMS G--------- ---------- BACU019689/1-290 ---------- --------LT SEQVRKHYTN G--------- ---------- ENSTTRP00000009730/1-303 ---------- --------LT SEQVRKHYTS G--------- ---------- 351 400 bmy_10866T0/1-534 HQAHSSSWAP PNAKYWAQFH EVRPQGPESR QQQHKHNRRV LGCCLLIMLA ENSP00000279206/1-303 ---------- ---------- -----GPEAH EST------- ---------- ENSBTAP00000043364/1-290 ---------- ---------- -----GPEAH EST------- ---------- BACU019689/1-290 ---------- ---------- -----GPEAH EST------- ---------- ENSTTRP00000009730/1-303 ---------- ---------- -----GPEAH EST------- ---------- 401 450 bmy_10866T0/1-534 GMGLHYVAFR KLEQMHRSFM DEKDRIITAI YNDTRARARS VPALSCPLLT ENSP00000279206/1-303 --GIFFVETQ NVQRLLETEM ---------- WAEL------ ---------- ENSBTAP00000043364/1-290 --GIIFVEKQ SMQRLQETEM ---------- WPEL------ ---------- BACU019689/1-290 --GIIFVETQ SVRRLQETEM ---------- WAEL------ ---------- ENSTTRP00000009730/1-303 --GIIFVESQ SVMRLQETEM ---------- WAEL------ ---------- 451 500 bmy_10866T0/1-534 VLAPPSRIPV PTTRCSPLQG QQSQAPGATA GAAAAATTQA SSR-PRDRAP ENSP00000279206/1-303 ---------- ---------- ----CPSAKG AIILYNRVQG SPTGAALGSP ENSBTAP00000043364/1-290 ---------- ---------- ----CPSAKG AIFLYNRVQG SST------- BACU019689/1-290 ---------- ---------- ----CPSAKG AIFLYNKVQE SST------- ENSTTRP00000009730/1-303 ---------- ---------- ----CPSAKG AIFLYNEFQE SST-VALESP 501 550 bmy_10866T0/1-534 PPQPLSGSPW RAHFGWGLRC APFWDTPLPK TRAIK ENSP00000279206/1-303 ALLPPL---- ---------- ---------- ----- ENSBTAP00000043364/1-290 ---------- ---------- ---------- ----- BACU019689/1-290 ---------- ---------- ---------- ----- ENSTTRP00000009730/1-303 ALSPQLG--- ---------- ---------- -----