KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:54:37 2014 Check: 00 .. Name: ENSP00000222753/1-388 Len: 414 Check: 2708 Weight: 1.00 Name: ENSBTAP00000043379/1-280 Len: 414 Check: 6734 Weight: 1.00 Name: bmy_19815T0/1-291 Len: 414 Check: 2553 Weight: 1.00 Name: BACU003776/1-204 Len: 414 Check: 5147 Weight: 1.00 // 1 50 ENSP00000222753/1-388 ---------- ---------- ------MTAS VLLHPRWIEP TVMFLYDNGG ENSBTAP00000043379/1-280 ---------- ---------- ------MTAS VLLHPRWIEP TVMFLYDNGG bmy_19815T0/1-291 MVRGRAAGAG AGDLAGGGRD RGCTEQSRAS VLLHPRWIEP TVMFLYDNGG BACU003776/1-204 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000222753/1-388 GLVADELNKN MEGAAAAAAA AAAAAAAGAG GGGFPHPAAA AAGGNFSVAA ENSBTAP00000043379/1-280 GLVADELNKN MEGAAEAAAA AAAAAAAGAG GGGFPHPA-- ---------- bmy_19815T0/1-291 GLAAKQ---- ---------- ---------- ---------- ---------- BACU003776/1-204 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000222753/1-388 AAAAAAAAAA NQCRNLMAHP APLAPGAASA YSSAPGEAPP SAAAAAAAAA ENSBTAP00000043379/1-280 ---------- ---------- ---------- ---------- ---------- bmy_19815T0/1-291 ---------- ---------- ---------- ---------- ---------- BACU003776/1-204 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000222753/1-388 AAAAAAAAAS SSGGPGPAGP AGAEAAKQCS PCSAAAQSSS GPAALPYGYF ENSBTAP00000043379/1-280 ---------- ---------- ---------- ---------- ------YGYF bmy_19815T0/1-291 ---------- ---------- --------CS PCSAAAQSSS GPAALPYGYF BACU003776/1-204 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000222753/1-388 GSGYYPCARM GPHPNAIKSC AQPASAAAAA AFADKYMDTA GPAAEEFSSR ENSBTAP00000043379/1-280 GSGYYPCARM GPHPNAIKSC AQPASAAAAA AFADKYMDTA GPAAEEFSSR bmy_19815T0/1-291 GSGYYPCARM GPHPNAIKSC AQPAS-AAAA AFADKYMDTA GPAAEEFSSR BACU003776/1-204 ---------M GPHPNAIKSC AQPAS-AAAA AFADKYMDTA GPAAEEFSSR 251 300 ENSP00000222753/1-388 AKEFAFYHQG YAAGPYHHHQ PMPGYLDMPV VPGLGGPGES RHEPLGLPME ENSBTAP00000043379/1-280 AKEFAFYHQG YAPGPYHHHQ PVPGYLDMPV VPGLGGPGES RHEPLGLPME bmy_19815T0/1-291 AKEFAFYHQG YAPGPYHHHQ PVPGYLDMPV VPGLGGPGES RHEPLGLPME BACU003776/1-204 AKEFAFYHQG YAPGPYHHHQ PVPGYLDMPV VSGLGGPGES RHEPLGLHME 301 350 ENSP00000222753/1-388 SYQPWALPNG WNGQMYCPKE QAQPPHLWKS TLPDVVSHPS DASSYRRGRK ENSBTAP00000043379/1-280 SYQPWALPNG WNGQMYCPKE QAQPPHLWKS TLPDVVSHPS DASSYRRGRK bmy_19815T0/1-291 SYQPWALPNG WNGQMYCPKE QAQPPHLWKS TLPDVVSHPS DASSYRRGRK BACU003776/1-204 SYQPWALPNG WNGQMYCPKE QAQPPHLWKS TLPDVVSHPS DASSYRRGRK 351 400 ENSP00000222753/1-388 KRVPYTKVQL KELEREYATN KFITKDKRRR ISATTNLSER QVTIWFQNRR ENSBTAP00000043379/1-280 KRVPYTKVQL KELEREYATN KFITKDKRRR ISATTNLSER QVTIWFQNRR bmy_19815T0/1-291 KRVPYTKVQL KELEREYATN KFITKDKRRR ISATTNLSER QVTIWFQNRR BACU003776/1-204 KRVPYTKVQL KELEREYATN KFITKDKRRR ISATTNLSER QVTIWFQNRR 401 450 ENSP00000222753/1-388 VKEKKVINKL KTTS ENSBTAP00000043379/1-280 VKEKKVINKL KTTS bmy_19815T0/1-291 VKEKKVINKL KTTS BACU003776/1-204 VKEKKVINKL KTTS