KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:39 2014 Check: 00 .. Name: ENSP00000264669/1-662 Len: 668 Check: 5837 Weight: 1.00 Name: ENSBTAP00000043394/1-660 Len: 668 Check: 1631 Weight: 1.00 Name: ENSTTRP00000004077/1-661 Len: 668 Check: 4184 Weight: 1.00 Name: bmy_19521T0/1-667 Len: 668 Check: 4301 Weight: 1.00 Name: BACU014707/1-511 Len: 668 Check: 4194 Weight: 1.00 // 1 50 ENSP00000264669/1-662 MALITLRKNL YRLSDFQMHR ALAALKNKPL NHVHKVVKER LCPWLCSRQP ENSBTAP00000043394/1-660 MALVTLRRNL YHLSDFRIHG ALAALKTQQV NHVHKTVKEH LCPWFWSQHP ENSTTRP00000004077/1-661 MALITLRRNL CHLSDFRIHG TLAGLKTQRV NCVHKTVKEH LCPWFWSLQL bmy_19521T0/1-667 MALITLRRNL CHLSDFRIHG ALAGLKIQRV NCVHKTVKEH LCPWYWSLQL BACU014707/1-511 MALITLRRNL CHLSDFRIHG ALAGLKTHRV NCVHKTVKEH LCPWFWSLQL 51 100 ENSP00000264669/1-662 EPFGVKFHHA HCKKFHSKNG NDLHPLGGPV FSQVSDCDRL EQNVKNEESQ ENSBTAP00000043394/1-660 GPIRVRFHHA HCKKFHSENG NDLHPVGEPG FSQVHNWDRF EHSVKNVDEQ ENSTTRP00000004077/1-661 EPVRVRFHHA HSKKFHSENG NDLHPVGEPV FSQAHAWDRS EHSVKNVDEQ bmy_19521T0/1-667 EPVRVRFHHA HSKKFHSENG ND-HPVGEPV SSQVHAWDRS EHSVTNVDEQ BACU014707/1-511 EPVRVRFHHA HSKKFHSENG NDLHPVGEPV SSQVHAWDRS EHSVKNVDEQ 101 150 ENSP00000264669/1-662 MFYRRLSNLT SSEEVLSFIS TMETLPDTMA AGALQRICEV EKKDGDQGLP ENSBTAP00000043394/1-660 MFYRKLNSFT SSGEILRFVS TLETLPDTMM AGALHRICEV ERKDGDQRLP ENSTTRP00000004077/1-661 IFYRRLNSFT SSEQVLHYIS TLQTLPDTMA AGALHRICEM EKKDDDQRLP bmy_19521T0/1-667 IFYRRLNSFT SSEEVLHFIS TLQTLPDTMA AGALHRICEM EKKDDDQRLP BACU014707/1-511 IFYRRLNSFT SSEEVLHFIS TLQTLPDTMA AGALHRICEM EKKGDDQRLP 151 200 ENSP00000264669/1-662 KEILENSIFQ ALCFQFEKEP SQLSNTSLVT ALQALILLHV DPQSSLLLNL ENSBTAP00000043394/1-660 KEILESSAFQ ALCDRFGRDP SDLSNAGLVT AFQALTLLCG DPQSHLLMNL ENSTTRP00000004077/1-661 KEILENSAFQ ALCNQFAQDP SNLSNTGLVT ALQALT-LYV GPQSRLLLSL bmy_19521T0/1-667 KEILENSAFQ ALCNQFAQDP SNLSNTGLVT ALQALTLLYV DPQSRLLLNL BACU014707/1-511 KEILENSAFQ ALCNQFAQDP SNLSNTGLVT ALQALTLLYV DPQSRLLLKL 201 250 ENSP00000264669/1-662 VAECQNRLRK GGMEVRNLCI LGESLITLHS SGCVTLELII NQLQGEKLET ENSBTAP00000043394/1-660 EAECQHRLER GGLDVHSLCI LGETLIKLHG PGCSTLDLII YQLQGESLET ENSTTRP00000004077/1-661 LAECQHRLAM GSLDIHSLCI LGECLIKLQG PGCSTLDLII YQLQGENLEE bmy_19521T0/1-667 LAECQHRLER GSLDIHSLCI LGESLIKLQG PGCSTLDLII YQLQGENLEE BACU014707/1-511 LAECQHRLER GSLDIHSLCI LGESLIKLQG PGCSTLDLII YQLQGGNLEE 251 300 ENSP00000264669/1-662 FTPEDIVALY RILQACTEKV DEHQTFLNKI NNFSLSIVSN LSPKLISQML ENSBTAP00000043394/1-660 FTPEDIVTVY RLLQASPEKA DQQQRFLNKI NHFSLSLVSN LSPKLMSQML ENSTTRP00000004077/1-661 FTPEDIVTLY RILQACPEKV DQHQTFLHKI NNFSLSVVPN LSPKLLSQML bmy_19521T0/1-667 FTPEDIVTLY RILQACPEKV DQHQTFLNKI NNFSLSVVSS LSPKLLSQML BACU014707/1-511 FTPEDIVTLY RILQACPEKA DQHQTFLNKM NNFSLSVVSS LSPKLLSQML 301 350 ENSP00000264669/1-662 TALVVLDQSQ AFPLIIKLGK YVVRHVPHFT NEELRRVLEA FIYFGHHDTF ENSBTAP00000043394/1-660 TALVVLDQTQ ALPLVIKLSK YVVRHIARFT SEELRKVLEA LIYFGHSDRF ENSTTRP00000004077/1-661 TALVVLDQTQ ALTLVIKLGK YVVRHIPHFT NEELKEVLEA FIYFGYNDRF bmy_19521T0/1-667 TALVVLDQTQ ALPLVIKLGK YVVRHIPHFT SEELREVLEA FIYFGHNDRF BACU014707/1-511 TALVVLDQTQ ALPLVIKLGK YVVRHIPHFT SEELREVLEA FIYFGHNDRF 351 400 ENSP00000264669/1-662 FTKALEHRVA AVCLTLDPEV VCRVMEYCSR ELILSKPILN AVAETFVCQT ENSBTAP00000043394/1-660 FTETLEQHVA SLCLTLDPEL VSRVMEYCSR KLILSEPIFN AVAETFVCQA ENSTTRP00000004077/1-661 FTEALEQHVA SLCLTLDPEV VSKVMEYCSR KLIFSKPILN AVAETFVCQS bmy_19521T0/1-667 FTKALEQHVA SLCLTLDPEV VSKVMEYCSR KLIFSKPILD AVAETFVCQS BACU014707/1-511 FTKALEQHVA SLCLTLDPEV VSKVMEYCSR KLIFSKPILD AVAETFVCQS 401 450 ENSP00000264669/1-662 EKFSPRQISA LMEPFGKLNY LPPNASALFR KLENVLFTHF NYFPPKSLLK ENSBTAP00000043394/1-660 EKFSPSQTAK LIEPFGKLNY LPPNASALFR KLENMLLTRF NHFPPKTLLR ENSTTRP00000004077/1-661 EKFSPNQTAE LIEPFGKLNY LPPNASALFR KLENILLTRF NYFPPKTLLK bmy_19521T0/1-667 EKFSPNQTAE LIEPFGKLNY LPPNASALFR KLENILLTRF NYFPPKTLLK BACU014707/1-511 EKFSPNQTAE LIEPFGKLNY LPPNASALFR KLENILLTRF NYFPPKTLLK 451 500 ENSP00000264669/1-662 LLHSCSLNEC HPVNFLAKIF KPLFLQRLQG KESHLDTLSR AQLTQLFLAS ENSBTAP00000043394/1-660 LLHSCSLIES HPVNFMAKIF SPYFLQQLQG AESYLDRLSL AQLTQLFLTS ENSTTRP00000004077/1-661 LLHSCSLIEC HPVNFMAKIF SPYFLQQLQG EESYLDRLSL AQLTQLFLTA bmy_19521T0/1-667 LLHSCSLIEC HPVNFMARLF SPYFLQQLQG EESYLDRLSL AQLTQLFLTV BACU014707/1-511 LLHSCSLIEC HPVNFMARIF SPYFLQQLQG EEPYLDRLSL AQLTQLFLTA 501 550 ENSP00000264669/1-662 VLECPFYKGP KLLPKYQVKS FLTPCCSLET PVDSQLYRYV KIGLTNLLGA ENSBTAP00000043394/1-660 ILECPFYKGP KLLPKFQVKS FLTPCSSLET PMDFHLYKSV MIGLIDLLGA ENSTTRP00000004077/1-661 ILECPFYKGP KLLPKYQVKS FLTPCSSLET PMDFQLYKSV MIGLIDLLGA bmy_19521T0/1-667 ILECPFYKGP KLLPKYQVKS FLTPCSSLET PMDFQLYKSV MIGLIDLLGA BACU014707/1-511 ILECPFYKVK K--------- ---------- ---------- ---------- 551 600 ENSP00000264669/1-662 RLYFAPKVLT PYCYTIDVEI KLDEEGFVLP STANEDIHKR IALCIDGPKR ENSBTAP00000043394/1-660 RLYFSSKVLT PYCYTIDVEI KLDEDGFVLP FTIDEDVHKR VALCIDGPKR ENSTTRP00000004077/1-661 RLYFASKVLT PYCYTIDVEI KLDEDGFVLP FTADEDIHKR VALCIDGPKR bmy_19521T0/1-667 RLYFASKVLT PYCYTIDVEI KLDEDGFVLP FTVDEDIHKR VALCIDGPKR BACU014707/1-511 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000264669/1-662 FCSNSKHLLG KEAIKQRHLQ LLGYQVVQIP YHEIGMLKSR RELVEYLQRK ENSBTAP00000043394/1-660 FCLNSKHLLG KEATKQRHLR LLGYQVVQIP YYEIEMLKSR LELVDYLQGK ENSTTRP00000004077/1-661 FCLNSKHLLG KEATKQRHLY LLGYQVVQIP YYEIEMLKSR LELVEYLQRK bmy_19521T0/1-667 FCLNSKHLLG KEATKQRHLH LLGYQVVQIP YYEIEMLKSR LELVEYLQRK BACU014707/1-511 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000264669/1-662 LFSQNT-VHW LQE----- ENSBTAP00000043394/1-660 LFSQNSGGHW -------- ENSTTRP00000004077/1-661 LFSQNSGGHW QE------ bmy_19521T0/1-667 LFSQNSGGHW NKDVKKAT BACU014707/1-511 ---------- --------