KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:40 2014 Check: 00 .. Name: ENSP00000309432/1-466 Len: 482 Check: 8175 Weight: 1.00 Name: ENSBTAP00000043407/1-466 Len: 482 Check: 9141 Weight: 1.00 Name: ENSTTRP00000015549/1-464 Len: 482 Check: 7652 Weight: 1.00 Name: bmy_15656T0/1-458 Len: 482 Check: 5478 Weight: 1.00 Name: BACU007141/1-466 Len: 482 Check: 8138 Weight: 1.00 // 1 50 ENSP00000309432/1-466 MAEAEGVPTT PGPASGSTFR GRRDVSGSWE RDQQVEAAQR ALVEVLGPYE ENSBTAP00000043407/1-466 MAEAEGVAEA PGPASGQTFK GRRPMSGSWE RDQQVEAAHR ALVEVLGPYE ENSTTRP00000015549/1-464 -MEAEGVAV- PDPASGQTFR GRRSMSGSWE RDQQVEAAQR ALVEVLGPYE bmy_15656T0/1-458 ---------- ---------- ----MSGSWE RDQQVEAAQR ALVEVLGPYE BACU007141/1-466 MAEAEGVAVA PGPASGQTFR GRRSMSGSWE RDQQVEAAQR ALVEVLGPYE 51 100 ENSP00000309432/1-466 PLLSRVQAAL VWERPARSAL WCLGLNAAFW FFALTSLRLV FLLAFGLMII ENSBTAP00000043407/1-466 PLLSRVQAAL VWERPARSAL WCLGLNAAFW FFALTSLRLV FLLAFSSMII ENSTTRP00000015549/1-464 PLLSRVQAAM VWERPARSAL WCLGLNAAFW FFALTSLRLV FLLAFSSMII bmy_15656T0/1-458 PLLSRVQAAL VWERPARSAL WCLGLNAAFW FFALTSLRLV FLLAFSSMII BACU007141/1-466 PLLSRVQAAL VWERPARSAL WCLGLNAAFW FFALTSLRLV FLLAFSSMII 101 150 ENSP00000309432/1-466 VCIDQWKNKI WPEIKVPRPD ALDNESWGFV HPRLLSVPEL CHHVAEVWVS ENSBTAP00000043407/1-466 VCIDQWKNKI WPEIKVPRPG VLDNESWGFV HPRLLSVPEL CHHVAEVWVS ENSTTRP00000015549/1-464 VCIDQWKSKI WPEIKVPRPD ALDNESWGFV HPRLLSVPEL CYHVAEVWVS bmy_15656T0/1-458 VCIDQWKSKI WPEIKVPRPD ALDNESWGFV HPRLLSVPEL CYHVAEVWVS BACU007141/1-466 VCIDQWKSKI WPEIKVPRPD ALDNESWGFV HPRLLSVPEL CYHVAEVWVS 151 200 ENSP00000309432/1-466 GTIFIRNVLL FKKQNPGKFC LLSCGILTFL AVLGRYVPGL LLSYLMLVTV ENSBTAP00000043407/1-466 GTIFIRNLLL FKKQNPGKFC LLSCGILTFL AVLGRYIPGL LLSYLILVTV ENSTTRP00000015549/1-464 GTIFIRNLLL FKKQNPGKFC LLSCGILTFL AVLGRYIPGL LLSYLILVTV bmy_15656T0/1-458 GTIFIRNLLL FKKQNPGKFC LLSCGILTFL AVLGRYIPGL LLSYLILVTV BACU007141/1-466 GTIFIRNLLL FKKQNPGKFC LLSCGILTFL AVLGRYIPGL LLSYLILVTV 201 250 ENSP00000309432/1-466 MMWPLAVYHR LWDRAYVRLK PALQRLDFSV RGYMMSKQRE RQLRRRALHP ENSBTAP00000043407/1-466 MMWPLAVYHR LWDRVYVRLK PALQRLDFSV RGYMMSKQRE RQLRRRALHP ENSTTRP00000015549/1-464 MMWPLAVYHR LWDRVYVRLK PALQRLDFSV RGYMMSKQRE RQLRRRGLHA bmy_15656T0/1-458 MMWPLAVYHR LWDRVYVRLK PALQRLDFSV RGYMMSKQRE RQLRRRGLHP BACU007141/1-466 MMWPLAVYHR LWDRVCVRLK PALQRLDFSV RGYMMSKQRE RQLRRRGLHP 251 300 ENSP00000309432/1-466 ERAMDNHSDS EEELAAFCPQ ---------- ------LDDS TVARELAITD ENSBTAP00000043407/1-466 ERAADNHSDS EEELAAFCPQ ---------- ------LDDS TVARELAITD ENSTTRP00000015549/1-464 ERAGDNHSDS EEELAAFCPQ ---------- ------LDDS TVARELAITD bmy_15656T0/1-458 ERAGDNHSDS EEELAAFCPQ GPHCPKSSVL VFSFPKLDDS TVARELAITD BACU007141/1-466 ERAGDNHSDS EEELAAFCPQ ---------- ------LDDS TVARELAITD 301 350 ENSP00000309432/1-466 SEHSDAEVSC TDNGTFNLSR GQTPLTEGSE DLDGHSDPEE SFARDLPDFP ENSBTAP00000043407/1-466 SEHSDAEVSC TDNGTFNLSR GQTPLTEGSE DLDGHSDPEE SFARDLPDFP ENSTTRP00000015549/1-464 SEHSDAEVSC TDNGTFNLSR GQTPLTEGSE DLDGHSDPEE SFARDLPDFP bmy_15656T0/1-458 SEHSDAEVSC TDNGTFNLSR GQTPLTEGSE DLDGHSDPEE SFARDLPDFP BACU007141/1-466 SEHSDAEVSC TDNGTFNLSR GQTPLTEGSE DLDGHSDPEE SFARDLPDFP 351 400 ENSP00000309432/1-466 SINMDPAGLD DEDDTSIGMP SLMYRSPPGA EEPQAPPASR DEAALPELLL ENSBTAP00000043407/1-466 SINVDPTGLD DEDDTSIGMP SLMYRSPPGA GESQGPPASR EEAALPELLL ENSTTRP00000015549/1-464 SINVDPAGLD DEDDTSIGMP SSMYRSPPGA EEPQGPPASQ DEAALPELLL bmy_15656T0/1-458 SINVDPAGLD DEDDTSIGMP SLMYRSPPGA EEPQGPPASR DEAALPELLL BACU007141/1-466 SINVDPAGLD DEDDTSIGMP TLMYRSPPGA EEPQGPPASR DEAALPELLL 401 450 ENSP00000309432/1-466 GALPVGSNLT SNLASLVSQG MIQLALSGAS QPGPSGAPAQ RATRGFLRSP ENSBTAP00000043407/1-466 GALPAGSNLT SNLASLVSQG MIQLALSGAS QPGPSGLPPR RATRGVLRAP ENSTTRP00000015549/1-464 GALPAGSNLT SNLASLVSQG MIQLALSGAS QPGPAGLPPR RATRGVLRAP bmy_15656T0/1-458 GALPAGSNLT SNLASLVSQG MIQLALSGAS QPGPAGLPPR RATRGVLRAP BACU007141/1-466 GALPAGSNLT SNLASLVSQG MIQLALSGAS QPGPAGLPPR RATRGVLRAP 451 500 ENSP00000309432/1-466 SSDLDTDAEG DDFELLDQSE LSQLDPASSR SH ENSBTAP00000043407/1-466 SSDLDTDAEG DDFELLDQSE LNQLDPASSR SH ENSTTRP00000015549/1-464 SSDLDTDAEG DDFELLDQSE LNQLDPASSR SH bmy_15656T0/1-458 SSDLDTDAEG DDFELLDQSE LNQLDPASSR SH BACU007141/1-466 SSDLDTDAEG DDFELLDQSE LNQLDPASSR SH