KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:40 2014 Check: 00 .. Name: ENSP00000382646/1-275 Len: 285 Check: 4197 Weight: 1.00 Name: ENSTTRP00000006036/1-280 Len: 285 Check: 8269 Weight: 1.00 Name: ENSBTAP00000043432/1-274 Len: 285 Check: 2314 Weight: 1.00 Name: bmy_09975T0/1-249 Len: 285 Check: 7298 Weight: 1.00 Name: BACU019163/1-284 Len: 285 Check: 8405 Weight: 1.00 // 1 50 ENSP00000382646/1-275 MAVASTFIPG LNPQNPHYIP ----GYTGHC PLLRFSVGQT YGQVTGQLLR ENSTTRP00000006036/1-280 KAMASTFIPG LNPQNPHYIP ----GYTGHC PLLRFSMGQT YGQMTGQLLR ENSBTAP00000043432/1-274 --MASTFIPG LNPQNPHYIP ----GYTGHC PLLRFSMGQT YGQMTGQLLR bmy_09975T0/1-249 ---------- ---------- ---------- ------MGQT YGQMTGQLLR BACU019163/1-284 -AMASTFIPG LNPQNPHCIP GRDQGFRGLC FCLWGCMGQT SGQMTGQLLH 51 100 ENSP00000382646/1-275 GPPGLAWPPV HRTLLPPIRP PRSPEVPRES LPVRRGQERL SSSMIPGYTG ENSTTRP00000006036/1-280 GSPGLARLPS HRTLLPPIRP PRSPDGPRKS LPVRRGHERL SSSMIPGYTG ENSBTAP00000043432/1-274 GSPGLAWPPA HRTLLPPIQP PRSPEPRRRS LPVRPGHERL SSSMVPGYTG bmy_09975T0/1-249 GSPGLAWPPA RRTLLPPIRP PRSPEGPRKS LPVRRGHERL SSSMIPGYTG BACU019163/1-284 GSPGLAWPPA HRTLLPPIRP PRSPEAPRKS LPVRRGHERL SSSMIPGYTG 101 150 ENSP00000382646/1-275 FVPRAQFIFA KNCSQVWAEA LSDFTHLHEK QGSEELPKEA KGRKDTEKDQ ENSTTRP00000006036/1-280 FVPQAQFIFA KNSSRVWADA LNDFTXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000043432/1-274 FVPQAQFIFA KNCSQVWAEA LNGFTQRNGG QGSQELPKEA KGEKDVEKDQ bmy_09975T0/1-249 FVPQAQFIFA KNRSQVWAEA LNDFTQWYGG QRSQELPQEA KGEKDVEKDQ BACU019163/1-284 FVPQAQFIFA KNRSQVWAEA LNDFTQWYGG QRSQELPKEA KGEKDVEKDQ 151 200 ENSP00000382646/1-275 VPEPEGQLE- --EPTL-EVV EQ-ASPYSMD DRDPRKFFMS GFTGYVPCAR ENSTTRP00000006036/1-280 XPKLEAELET EKEPELGQEA EQ-ASPYSTD DRDPRKFFMP GFTGYVPRAR ENSBTAP00000043432/1-274 EPKPEVEKE- ---PELGQEA EQ-ASPYSMD DRDPRKFFMS GFTGYVPRAR bmy_09975T0/1-249 EPKLEAELET EKEPELGQEA EQKASPYSMD DRDPHKFFMS GFTGYVPRAR BACU019163/1-284 EPKLEAELET EKEPELGQEA EQKASPYSMD DRDPRKFFMS GFTGYVPRAR 201 250 ENSP00000382646/1-275 FLFGSSFPVL TNQALQEFGQ KHSPGSAQ-D PKHLPPLPRT YPQNLGLLPN ENSTTRP00000006036/1-280 FLFGSSFPVL SNQALQEFGQ MKSGVRSQKD PKHLPSLSRT YPQNLGLVPK ENSBTAP00000043432/1-274 FLFGSSFPVL SNQALQEFGE MKSPGRSQKD PKHLPALSRT YPQHLGLLPK bmy_09975T0/1-249 FLFGSSFPVL SNQALQEFGQ MKSGGRSQKD PKHLPSLSRT YPQNLGLLPK BACU019163/1-284 FLFGSSFPVL SNQALQEFGQ MKSGGRSQKD PKHLPSLSRT YPQNLGLLPK 251 300 ENSP00000382646/1-275 YGGYVPGYKF QFGHTFGHLT HDALGLSTFQ KQLLA ENSTTRP00000006036/1-280 YGGYVPGYKF QFGRTYGHLT HDALGLSTIQ KQLLA ENSBTAP00000043432/1-274 YGGYVPGYKF QFGRTYGHLT QDALGLSTLQ KQLLV bmy_09975T0/1-249 YGGYVPGYKF QFGRTYGHLT HDALGLSTIQ KQLLA BACU019163/1-284 YGGYVPGYKF QFGRTYGHLT HDALGLSTIQ KQLLA