KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:54:42 2014 Check: 00 ..
Name: ENSP00000299084/1-444 Len: 445 Check: 7717 Weight: 1.00
Name: ENSBTAP00000043442/1-443 Len: 445 Check: 2694 Weight: 1.00
Name: BACU020057/1-432 Len: 445 Check: 2287 Weight: 1.00
Name: bmy_04924T0/1-355 Len: 445 Check: 1644 Weight: 1.00
Name: ENSTTRP00000012547/1-436 Len: 445 Check: 3515 Weight: 1.00
//
1 50
ENSP00000299084/1-444 MSEETATSDN DNSYARVRAV VMTRDDSSGG WLPLGGSGLS SVTVFKVPHQ
ENSBTAP00000043442/1-443 MSEETATSDN DNSYARVRAV VMTRDDSSGG WLPLGGSGLS CVTVFKVPHQ
BACU020057/1-432 ---------- -NSYARVRAV VMTRDDSSGG WLPLGGSGLS CVTVFKVPHQ
bmy_04924T0/1-355 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000012547/1-436 -------SDN DNSYARVRAV VMTRDDSSGG WLPLGGSGLS CVTVFKVPHQ
51 100
ENSP00000299084/1-444 EENGCADFFI RGERLRDKMV VLECMLKKDL IYNKVTPTFH HWKIDDKKFG
ENSBTAP00000043442/1-443 EENGCADFFI RGERLRDKMV VLECMLKKDL IYNKVTPTFH HWKIDDKKFG
BACU020057/1-432 EENGCADFFI RGERLRDKMV VLECMLKKDL IYNKVTPTFH HWKIDDKKFG
bmy_04924T0/1-355 ---------- ---------- ----MLKKDL IYNKVTPTFH HWKIDDKKFG
ENSTTRP00000012547/1-436 EENGCADFFI RGERLRDKMV VLECMLKKDL IYNKVTPTFH HWKIDDKKFG
101 150
ENSP00000299084/1-444 LTFQSPADAR AFDRGIRRAI EDISQGCPES KNEAEGADD- LQANEEDSSS
ENSBTAP00000043442/1-443 LTFQSPADAR AFDRGIRRAI EDISQGCPSF KNEAEGTEDN LQAAEEDTSS
BACU020057/1-432 LTFQSPADAR AFDRGIRRAI EDISQGCPAF KNETEGAEDN LQAAEEDTSS
bmy_04924T0/1-355 LTFQSPADAR AFDRGIRRAI EDISQGCPAF KNETEGAEDN LQAAEEDTSS
ENSTTRP00000012547/1-436 LTFQSPADAR AFDRGIRRAI EDISQGCPAF KNETEGAEDN LQAAEEDTSS
151 200
ENSP00000299084/1-444 SLVKDHLFQQ ETVVTSEPYR SSNIRPSPFE DLNARRVYMQ SQANQITFGQ
ENSBTAP00000043442/1-443 SLVKDHLFHQ DTVVTSEPYR SS--RPSPFE GLNARSVYLR SQANQIMFSH
BACU020057/1-432 SLVKDHPFQQ ETVITSEPYR SS--RPSPFE DLNARRVYLQ SQANQIMFSH
bmy_04924T0/1-355 SLVKDHLFQQ ETVITSEPYR SS--RPSPFE DLNARRVYLQ SQANQIMFSH
ENSTTRP00000012547/1-436 SLVKDHLFQQ ETVITSEPYR SS--RPSPFE DLNARRVYLQ SQANQIMFSH
201 250
ENSP00000299084/1-444 PGLDIQSRSM EYVQRQISKE CGSLKSQNRV PLKSIRHVSF QDEDEIVRIN
ENSBTAP00000043442/1-443 PGLDIQDRSI EYGQRQMPKE SGGLKSQNKV PLKSIRHVSF QDEDEIVRIN
BACU020057/1-432 PGLDIQGRSI EYVQRQIPKE CGSLKSQNKV PLKSIRHVSF QDEDEIVRIN
bmy_04924T0/1-355 PGLDIQGRSI EYVQRQIPKE CGSLKSQNK- ---------- ---DEIVRIN
ENSTTRP00000012547/1-436 PGLDIQGRSI EYVQRQIPKE CGSLKSQNKV PLKSIRHVSF QDEDEIVRIN
251 300
ENSP00000299084/1-444 PRDILIRRYA DYRHPDMWKN DLERDDADSS IQFSKPDSKK SDYLYSCGDE
ENSBTAP00000043442/1-443 PRDILIRRYA DYRHPDMWKN DLERDDTDSS VQFSKPDSKK SDYLYSCGDE
BACU020057/1-432 PRDILIRRYA DYRHPDVWKS DLERDDTDSS IQFSKPDSKK SDYLYSCGDE
bmy_04924T0/1-355 PRDILIRRYA DYRHPDMWKS DLERDDTDSS IQFSKPDSKK SDYLYSCGDE
ENSTTRP00000012547/1-436 PRDILIRRYA DYRHPDMWKS DLERDDTDSS IQFSKPDSKK SDYLYSCGDE
301 350
ENSP00000299084/1-444 TKLSSPKDSV VFKTQPSSLK IKKSKRRKED GERSRCVYCQ ERFNHEENVR
ENSBTAP00000043442/1-443 TKLSSLKDSV VFKTQPSSLK FKKSKRRKED GERSRCVYCQ ERFNHEENGR
BACU020057/1-432 TKLSSLKDSV VFKTQPSSLK FKKSKRRKED GERSRCVYCQ ERFNHEENGR
bmy_04924T0/1-355 TKLSSLKDSV VFKTQPSSLK FKKSKRRKED GERSRCVYCQ ERFNHEENGR
ENSTTRP00000012547/1-436 TKLSSLKDSV VFKTQPSSLK FKKSKRRKED GERSRCVYCQ ERFNHEENGR
351 400
ENSP00000299084/1-444 GKCQDAPDPI KRCIYQVSCM LCAESMLYHC MSDSEGDFSD PCSCDTSDDK
ENSBTAP00000043442/1-443 GKCQDAPDPI KRCIYQVSCM LCAESMLYHC MSDSEGDFSD PCSCDTSDDK
BACU020057/1-432 GKCQDAPDPI KRCIYQVSCM LCAESMLYHC MSDSEGDFSD PCSCDTSDDK
bmy_04924T0/1-355 GKCQDAPDPI KRCIYQVSCM LCAESMLYHC MSDSEGDFSD PCSCDTSDDK
ENSTTRP00000012547/1-436 GKCQDAPDPI KRCIYQVSCM LCAESMLYHC MSDSEGDFSD PCSCDTSDDK
401 450
ENSP00000299084/1-444 FCLRWLALVA LSFIVPCMCC YVPLRMCHRC GEACGCCGGK HKAAG
ENSBTAP00000043442/1-443 FCLRWLALVA LSFIVPCMCC YVPLRMCHRC GEACGCCGGK HKAAG
BACU020057/1-432 FCLRWLALVA LSFIVPCMCC YVPLRMCHRC GEACGCCGGK HKAAG
bmy_04924T0/1-355 FCLRWLALVA LSFIVPCMCC YVPLRMCHRC GEACGCCGGK HKAAG
ENSTTRP00000012547/1-436 FCLRWLALVA LSFIVPCMCC YVPLRMCHRC GEACGCCGGK HKAAG