KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:44 2014 Check: 00 .. Name: ENSP00000259608/1-196 Len: 221 Check: 8840 Weight: 1.00 Name: ENSBTAP00000043466/1-217 Len: 221 Check: 3893 Weight: 1.00 Name: ENSTTRP00000011302/1-196 Len: 221 Check: 9176 Weight: 1.00 Name: bmy_09972T0/1-187 Len: 221 Check: 2318 Weight: 1.00 Name: BACU017515/1-187 Len: 221 Check: 2779 Weight: 1.00 // 1 50 ENSP00000259608/1-196 ---------- ---------- -MNQADPRLR AVCLWTLTSA AMSRGDNCTD ENSBTAP00000043466/1-217 ELWGSGPERG GSKGGCHSCQ IINQADPLVQ A----RMTTA GQSRLCNCTD ENSTTRP00000011302/1-196 ---------- ---------- -INQADPWLR AGCLLASVPA GLSRSDNYTD bmy_09972T0/1-187 ---------- ---------- --MPANS--- -----ASVPS GLSRSDNCTD BACU017515/1-187 ---------- ---------- --MPANS--- -----ASTPS GLSRSDNCTD 51 100 ENSP00000259608/1-196 L----LALGI PSITQAWGLW VLLGAVTLLF LISLAAHLSQ WTRGRSRSHP ENSBTAP00000043466/1-217 HRTDELLTGI PSLTKGWGLW ALLGAVTLLL LISLAVHLFQ WTSGRSRSQP ENSTTRP00000011302/1-196 L----LAPGI PSLTKAWGLW ALLGAVTLLL LISLAVHLFQ WTSGWSRNHP bmy_09972T0/1-187 L----LVPGI PSVTKAWGLW ALLGVVTLLL LISLAVHLFQ WTSGWSRSHP BACU017515/1-187 L----LVPGI PSVTKAWGLW ALLGVVTLLL LISLAVHLFQ WTSGWSRSHP 101 150 ENSP00000259608/1-196 GQGRSGESVE EVPLYGNLHY LQTGRLSQDP EPDQQDPTLG GPARAAEEVM ENSBTAP00000043466/1-217 GHGRSGESVE DVPLYGNLHY LQTGRLSQEP GPDPQDSAPG GPARAAEEVM ENSTTRP00000011302/1-196 GQGRPGESAE EVPLYGNLHY LQTGRLSQEP GPDQQNPTPG GPARAAEEVM bmy_09972T0/1-187 GQGRPGESAE EVPLYGNLHY LQTGRLSQEP GPDQQDPTPG GPARAAEEVM BACU017515/1-187 GQGRPGESVE EVPLYGNLHY LQTGRLSQEP GPDQQDPTPG GPARAAEEVM 151 200 ENSP00000259608/1-196 CYTSLQLRPP QGRIPGPGTP VKYSEVVLDS EPKSQASGPE PELYASVCAQ ENSBTAP00000043466/1-217 CYTSLQLRPP QGRVPSPGSP IKYSEVLLDS EPKPQASDPE PELYASVCAQ ENSTTRP00000011302/1-196 RYTSLQLRPP QGRIPSPGSP IKYSEVVLDP EPKPQALSPE PELYASVCAQ bmy_09972T0/1-187 CYTSLQLRPP QGRIPSPGSP IKYSEVVLDP EPKPQASSPE PELYASVCAQ BACU017515/1-187 CYTSLQLRPP QGWIPSPGSP IKYSEVVLDP EPKPQASSPE PELYASVCAQ 201 250 ENSP00000259608/1-196 TRRARASFPD QAYANSQPAA S ENSBTAP00000043466/1-217 GRRARASFPD QAYANSHPAP S ENSTTRP00000011302/1-196 TRRARASFPD QAYANSQPAP S bmy_09972T0/1-187 TRRARASFPD QAYANSQPAP S BACU017515/1-187 TRRARASFPD QAYANSQPAP S