KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:47 2014 Check: 00 .. Name: ENSP00000403293/1-708 Len: 710 Check: 5911 Weight: 1.00 Name: ENSTTRP00000007084/1-674 Len: 710 Check: 7890 Weight: 1.00 Name: ENSBTAP00000043492/1-707 Len: 710 Check: 9869 Weight: 1.00 Name: bmy_21050T0/1-669 Len: 710 Check: 6680 Weight: 1.00 Name: BACU004832/1-675 Len: 710 Check: 8189 Weight: 1.00 // 1 50 ENSP00000403293/1-708 MSFKDKDERI SCLEAYVTLT SKSSRFTDET EILKMSQRHS GQAGTEAGNG ENSTTRP00000007084/1-674 ---------- ---------- ---------- ----MSERHS GQAGTRAGNE ENSBTAP00000043492/1-707 RSFKAQSEKF PLSEAYVMLA SKNSRFTDET EILKMSERHS GEAGTGAGNE bmy_21050T0/1-669 ---------- ---------- ---------- ----MSERHS GQAGTGAGNE BACU004832/1-675 ---------- ---------- ---------- ----MSERHS GQAGTGAGNE 51 100 ENSP00000403293/1-708 ADSPPIVNSK YSTFRDFCST SSFQDSGYNE -LKSCSFDNI DKEYLGKKEK ENSTTRP00000007084/1-674 VDS-PIVNIK SSSFGDFCST SSFQDSGYSE LLKSCSFDNT DKESFGKKER ENSBTAP00000043492/1-707 VDS-PIVRVK SSSFGDLCST SSFQDSGYSE LLKSCSFDNT DKELFGKKER bmy_21050T0/1-669 VDS-PIVNVK SSSFGDFCST SSFQDSGYSE LLKSCSFDNT DKESFGKKER BACU004832/1-675 VDS-PIVNVK SSSFGDFCST SSFQDSGYSE LLKSCSFDNT DKESFGKKER 101 150 ENSP00000403293/1-708 GPTLLYEHPE TSGLGLTHPL ESPTQKKKCI LPRKEKDKTP ELCETPKISG ENSTTRP00000007084/1-674 GSTLIHEHPE TSSLALTHSL ESPTQRKRFV FPRKEKDKTP DLCETPKVSG ENSBTAP00000043492/1-707 GSTLIHEYPE TSSLALTYSL ESPIQRKRFV FLRKENDKTP ELCETPKVSR bmy_21050T0/1-669 GSTLIHEHLE TSSLALTHSL ESPTQRKRFV FPRKEKDKTP DLCETPKVSG BACU004832/1-675 GSTLIHEHPE TSSLALTHSL ESPTQRKRFV FPRKEKDKTP DLCETPKVSG 151 200 ENSP00000403293/1-708 KKCLPRRRLN VSFALLKGDF ESQNSSLESS ISQVINLEKN IPSSASGFSR ENSTTRP00000007084/1-674 KKFLLRRRLD VSFSLLKGDF ESQNSSLESS TSQVPNLEKN IPSSASGFPR ENSBTAP00000043492/1-707 KKHLLRRRLD ISFSLLDRDV ESHSSSLESC TSQVPNLEKN IPSSASGFPR bmy_21050T0/1-669 KKFLLRRRLD VSFSLLKGDF ESQNSSLESS TSQVPNLEKN IPSSASGFPR BACU004832/1-675 KKFLLRRRLD VSFSLLKGDF ESQDSSLESS TSQVPNLEKN IPSSALGFPR 201 250 ENSP00000403293/1-708 ANNFSPLVTS TLKTEEVTSC SQKLRLNFSQ QKTSTIDDSK DDCSLFEVEC ENSTTRP00000007084/1-674 QNNFSSLVTS TLKTEEATSS SQKLRLNFSQ QKTSTVDDSK DNCSLFEVEC ENSBTAP00000043492/1-707 QGNFSSSVTS TLRTGEVTSS SQKLRLDFSQ QKTSTVDDSK DDCGLFEVEC bmy_21050T0/1-669 QNNFSSLVNS TLKTEEATSS SQKLRLNFSQ QKTSTVDDSK DNCSLFEVEC BACU004832/1-675 QNNFSSLVTS TLKTEEATSS SQNLRLNFSQ QKTSTVDDSK DNCSLFEVEC 251 300 ENSP00000403293/1-708 ISPIQGNNFK DSITHDFSDS SLCINDENAC PELLGSSVSG TTCGTDEDIF ENSTTRP00000007084/1-674 ISPIQGNSFK DSITHDFSDS SLCINDENTY PELLGSSVSR TTCGTDEDIF ENSBTAP00000043492/1-707 ISPIQGSNFK DSITHDFSDS SLCINNENTY PELLGSSVGG TSCRTDEDIF bmy_21050T0/1-669 ISPIQGSSFK DSITHDFSDS SLCINDENTY PELLGSSVSG TTCGTDEDIF BACU004832/1-675 ISPIQGSSFK DSITHDFSDS SLCINDENTY PELLGSSVSG TTCGTDEDIF 301 350 ENSP00000403293/1-708 VTPISNLVAN IRFNASQILS PSPEVRGSIS TPEDSGFNSL SLEKSEDSLS ENSTTRP00000007084/1-674 VTPISNLVAN VKFNVSQRLS PLGEVRRNIS TPEDSGFNSL CLDKSEDSLT ENSBTAP00000043492/1-707 VTPISNLVPS VKFNASRRFS PSAGVRRNIS TPEDSGFNSL CLDKSEDSLS bmy_21050T0/1-669 VTPISNLVAN VKFNASQRLS PLGEVRRNIS TPEDSGFN-- ----SEDSLA BACU004832/1-675 VTPISNLVAN VKFNASQRLS PLGEVRRNIS TPEDSGFNSL CLDKSEDSLA 351 400 ENSP00000403293/1-708 DQEGSFQELL QKHKGTPKVG DTIRKTRHLG RSRRLSTLRE QSSQSETEEE ENSTTRP00000007084/1-674 DQEGSFQELL QKHKGTLKVR DTVRRSRRLG RLRRLSTLRE QGSQSETEEE ENSBTAP00000043492/1-707 EQEGSFQELL QKHKGTLKVR DTIKKSRRLG RLRRLSTLRE QGSQSETEEE bmy_21050T0/1-669 DQEGSFQELL QKHKGTLKVR DTVKRSRRXG RLRRLSTLRE QGSQSETEEE BACU004832/1-675 DQEGSFQELL QKHKGTLKVR DTVKRSRRLG RLRRLSTLRE QGSQSETEEE 401 450 ENSP00000403293/1-708 KQIVHPDSEK RAAAASAISE GQLSSD-ESG DLTFSLKNLS KTPALQLVHE ENSTTRP00000007084/1-674 KQPNLSGSES TPVATSDISE SQPSSDSKSG DLSLSFKNLS KTPALQLVHE ENSBTAP00000043492/1-707 NQTYLSSSES TPATTSDVSE SQPSSDNKSE DL--SFKNLS KTPALQLVHE bmy_21050T0/1-669 KQPNLSGSES TPVATSDISE SQPSSDNKSG DLSLSFKNLS KTPALQLVHE BACU004832/1-675 KQPNLSVSES TPVATSDISE SQPSSDNKSG DLSLSFKNLS KTPALQLVHE 451 500 ENSP00000403293/1-708 LFMKSKRKRL QENSGHEFLE QGDGEKIAVL QCILAGLIGK KMGIEKLDIL ENSTTRP00000007084/1-674 LFMKSKRKRL QQSGARELLE ERDGGKIAVL QRVLAGLIGK KMGIEKLDIL ENSBTAP00000043492/1-707 LFMKSRRKRF QQNGAHELLE ERDGGKIAVL QRVLAGLIGK KMGIEKLDIL bmy_21050T0/1-669 LFMKSKRKRF QQSGARELLE ERDGGKIAVL QRVLAGLIGK KMGIEKLDIL BACU004832/1-675 LFMKSKRKRF QQSGARELLE ERDGGKIAVL QRVLAGLIGK KMGIEKLDIL 501 550 ENSP00000403293/1-708 TELKYRNLKH ILAMVLESLT AESLCSVWKV SRNWREIVVQ DKNANRRRKF ENSTTRP00000007084/1-674 TELKYRNLKH VLAMVLDSLA AESLCSIWKV SKNWREIIIQ DKKANQRRKF ENSBTAP00000043492/1-707 TELKYRNLKH VLAMVLDSLT AESLCSVWKV SRNWREIIVQ DKKANRRRKL bmy_21050T0/1-669 TELKYRNLKH VLAMVLDSLA AESLCSVWKV SRNWREIIIQ DKKANQRRKF BACU004832/1-675 TELKYRNLKH VLAMVLDSLA AESLCSVWKV SRNWREIIIQ DKKANQRRKF 551 600 ENSP00000403293/1-708 YITQLKTDSE GAVLNVEDAA TRLQLLNRSA LRSVQAQARI PGSQREQGST ENSTTRP00000007084/1-674 HITQLKTDTE XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000043492/1-707 HITQLKTNSE GAILNVEDAA TRLHLLNRSA LRSVQAQART PGFQKEQAST bmy_21050T0/1-669 HITQLKTDSE GAILNVDDAA TRLHLLNRSA LRSVQAQART PGFQKEQVST BACU004832/1-675 HITQLKTDSE GAILNVDDAA TRLHLLNRSA LRSVQAQART PGFQKEQVST 601 650 ENSP00000403293/1-708 LSPWGEVLTP LASSSVTHLS SKQEEYVKVA KTLFTDEALK PCPRCQSPAK ENSTTRP00000007084/1-674 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXID-ALK PCPRCQSPAK ENSBTAP00000043492/1-707 FSPWGEVLTP IASSSVTHLS SKQEEYVKVA KTLFIDEALK PCPRCQSPAK bmy_21050T0/1-669 FSPWGEVLTP IASSSVTHLS SKQEEYVKVA KTLFIDEALK PCPRCQSPAK BACU004832/1-675 FSPWGEVLTP IASSSVTHLS SKQEEYVKVA KTLFIDEALK PCPRCQSPAK 651 700 ENSP00000403293/1-708 YQPYKKRGLC SRTACGFDFC VLCLCAYHGS EECSRGAAKP RNRKDALPGS ENSTTRP00000007084/1-674 YQPYKKRGLC SSTACGFDFC VLCLCAYHGS EECSRGAAKP RNRKDALPGS ENSBTAP00000043492/1-707 YQPYKKRGLC SRTACGFDFC VLCLCAYHGS EECSRGAAKP RNRKDVLPGS bmy_21050T0/1-669 YQPYKKRGLC SSTACGFDFC VLCLCDYHGS EECSRGAAKP RNRKDALPGS BACU004832/1-675 YQPYKKRGLC SSTACGFDFC VLCLCDYHGS EECSRGAAKP RNRKDALPGS 701 750 ENSP00000403293/1-708 AQSKRNLKRL ENSTTRP00000007084/1-674 AQSKRNLKRL ENSBTAP00000043492/1-707 AQSKRNLKRL bmy_21050T0/1-669 AQSKRNLKRL BACU004832/1-675 AQSKRNLKRL