KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:50 2014 Check: 00 .. Name: ENSBTAP00000043534/1-174 Len: 238 Check: 8947 Weight: 1.00 Name: ENSP00000335285/1-238 Len: 238 Check: 6513 Weight: 1.00 Name: BACU007997/1-238 Len: 238 Check: 7091 Weight: 1.00 Name: bmy_05783T0/1-238 Len: 238 Check: 7257 Weight: 1.00 Name: ENSTTRP00000004246/1-223 Len: 238 Check: 5075 Weight: 1.00 // 1 50 ENSBTAP00000043534/1-174 ---------- ---------- ---------- -----GDAGL GPRPAPP--P ENSP00000335285/1-238 MVLLLLVAIP LLVHSSRGPA HYEMLGRCRM VCDPHGPRGP GPDGAPASVP BACU007997/1-238 MVLLLLVAIP LLVHSSRGPA HYEMLGRCRM VCDPHGPQGP GPDGAPASVP bmy_05783T0/1-238 MVLLLLVAIP LLVHSSRGPA HYEMLGRCRM VCDPHGPRGP GPDGAPASVP ENSTTRP00000004246/1-223 ---------- -----SRGPA HYEMLGRCRM VCDPHGPRGP GPDGAPASVP 51 100 ENSBTAP00000043534/1-174 RFPLWAPG-V ARQ------- ---PPLPR-- ---------P LIAAPAARRL ENSP00000335285/1-238 PFPPGAKGEV GRRGKAGLRG PPGPPGPRGP PGEPGRPGPP GPPGPGPGGV BACU007997/1-238 PFPQGAKGEV GRRGKAGLRG PPGPPGPRGP PGEPGRPGLP GPPGPGPGGV bmy_05783T0/1-238 PFPQGAKGEV GRRGKAGLRG PPGPPGPRGP PGEPGRPGPP GPPGPGPGGV ENSTTRP00000004246/1-223 PFPQGAKGEV GRRGKAGLRG PPGPPGPRGP PGEPGRPGPP GPPGPGPGGV 101 150 ENSBTAP00000043534/1-174 TPPA-LPPR- ---EGXRRPH EGYEVLRFDD VVTNVGNAYE AASGKFTCPM ENSP00000335285/1-238 APAAGYVPRI AFYAGLRRPH EGYEVLRFDD VVTNVGNAYE AASGKFTCPM BACU007997/1-238 APPAGYVPRI AFYAGLRRPH EGYEVLRFDD VVTNVGNAYE AASGKFTCPM bmy_05783T0/1-238 APPAGYVPRI AFYAGLRRPH EGYEVLRFDD VVTNVGNAYE AASGKFTCPM ENSTTRP00000004246/1-223 APPAGYVPRI AFYAGLRRPH EGYEVLRFDD VVTNVGNAYE AASGKFTCPM 151 200 ENSBTAP00000043534/1-174 PGVYFFAYHV LMRGGDGTSM WADLMKNGQV RASAIAQDAD QNYDYASNSV ENSP00000335285/1-238 PGVYFFAYHV LMRGGDGTSM WADLMKNGQV RASAIAQDAD QNYDYASNSV BACU007997/1-238 PGVYFFAYHV LMRGGDGTSM WADLMKNGQV RASAIAQDAD QNYDYASNSV bmy_05783T0/1-238 PGVYFFAYHV LMRGGDGTSM WADLMKNGQV RASAIAQDAD QNYDYASNSV ENSTTRP00000004246/1-223 PGVYFFAYHV LMRGGDGTSM WADLMKNGQV RASAIAQDAD QNYDYASNSV 201 250 ENSBTAP00000043534/1-174 ILHLDVGDEV FIKLDGGKVH GGNTNKYSTF SGFIIYPD ENSP00000335285/1-238 ILHLDVGDEV FIKLDGGKVH GGNTNKYSTF SGFIIYPD BACU007997/1-238 ILHLDVGDEV FIKLDGGKVH GGNTNKYSTF SGFIIYPD bmy_05783T0/1-238 ILHLDVGDEV FIKLDGGKVH GGNTNKYSTF SGFIIYPD ENSTTRP00000004246/1-223 ILHLDVGDEV FIKLDGGKVH GGNTNKYSTF SGFIIYPD