KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:54:51 2014 Check: 00 .. Name: BACU004637/1-698 Len: 1217 Check: 2173 Weight: 1.00 Name: bmy_02807T0/1-765 Len: 1217 Check: 1079 Weight: 1.00 Name: ENSTTRP00000007477/1-1215 Len: 1217 Check: 1438 Weight: 1.00 Name: ENSBTAP00000043550/1-1217 Len: 1217 Check: 2949 Weight: 1.00 // 1 50 BACU004637/1-698 -----VIIQG FRSYRDQTIV DPFSSKHNVI ---------- ---AIQFVLS bmy_02807T0/1-765 -----VIIQG FRSYRDQTIV DPFSSKHNVI VGRNGSGKSN FFYAIQFVLS ENSTTRP00000007477/1-1215 MYIKQVIIQG FRSYRDQTIV DPFSSKHNVI VGRNGSGKSN FFYAIQFVLS ENSBTAP00000043550/1-1217 MYIKQVIIQG FRSYRDQTIV DPFSSKHNVI VGRNGSGKSN FFYAIQFVLS 51 100 BACU004637/1-698 DEFSHLRPEQ RLALLHEGTG PRVISAFVEI IFDNSDNRLP IDKEEVSLRR bmy_02807T0/1-765 DEFSHLRPEQ RLALLHEGTG PRVISAFVEI IFDNSDNRLP IDKEEVSLRR ENSTTRP00000007477/1-1215 DEFSHLRPEQ RLALLHEGTG PRVISAFVEI IFDNSDNRLP IDKEEVSLRR ENSBTAP00000043550/1-1217 DEFSHLRPEQ RLALLHEGTG PRVISAFVEI IFDNSDNRLP IDKEEVSLRR 101 150 BACU004637/1-698 VIGAKKDQYF LDKKMVTKND VMNLLESAGF SRSNPYYIVK QGKINQMATA bmy_02807T0/1-765 VIGAKKDQYF LDKKMVTKND VMNLLESAGF SRSNPYYIVK QGKINQMATA ENSTTRP00000007477/1-1215 VIGAKKDQYF LDKKMVTKND VMNLLESAGF SRSNPYYIVK QGKINQMATA ENSBTAP00000043550/1-1217 VIGAKKDQYF LDKKMVTKND VMNLLESAGF SRSNPYYIVK QGKINQMATA 151 200 BACU004637/1-698 PDSQRLKLLR EVAGTRVYDE RKEESISLMK ETEGKREKIN ELLKYIEERL bmy_02807T0/1-765 PDSQRLKLLR EVAGTRVYDE RKEESISLMK ETEGKREKIN ELLKYIEERL ENSTTRP00000007477/1-1215 PDSQRLKLLR EVAGTRVYDE RKEESISLMK ETEGKREKIN ELLKYIEERL ENSBTAP00000043550/1-1217 PDSQRLKLLR EVAGTRVYDE RKEESISLMK ETEGKREKIN ELLKYIEERL 201 250 BACU004637/1-698 HTLEEEKEEL AQYQKWDKMR RALEYTIYNQ ELNETRAKLD ELSAKRETSG bmy_02807T0/1-765 HTLEEEKEEL AQYQKWDKMR RALEYTIYNQ ELNETRAKLD ELSAKRETSG ENSTTRP00000007477/1-1215 HTLEEEKEEL AQYQKWDKMR RALEYTIYNQ ELNETRAKLD ELSAKRETSG ENSBTAP00000043550/1-1217 HTLEEEKEEL AQYQKWDKMR RALEYTIYNQ ELNETRAKLD ELSAKRETSG 251 300 BACU004637/1-698 EKSRQLRDAQ QDARDKMEDI ERQVRELKTK ISAMKEEKEQ LSAERQEQIK bmy_02807T0/1-765 EKSRQLRDAQ QDARDKMEDI ERQVRELKTK ISAMKEEKEQ LSAERQEQIK ENSTTRP00000007477/1-1215 EKSRQLRDAQ QDARDKMEDI ERQVRELKTK ISAMKEEKEQ LSAERQEQIK ENSBTAP00000043550/1-1217 EKSRQLRDAQ QDARDKMEDI ERQVRELKTK ISAMKEEKEQ LSAERQEQIK 301 350 BACU004637/1-698 QRTKLELKAK DLQDELAGNS EQRKRLLKER QKLLEKIEEK QKELAETEPK bmy_02807T0/1-765 QRTKLELKAK DLQDELAGNS EQRKRLLKER QKLLEKIEEK QKELAETEPK ENSTTRP00000007477/1-1215 QRTKLELKAK DLQDELAGNS EQRKRLLKER QKLLEKIEEK QKELAETEPK ENSBTAP00000043550/1-1217 QRTKLELKAK DLQDELAGNS EQRKRLLKER QKLLEKIEEK QKELAETEPK 351 400 BACU004637/1-698 FNSVKEKEER GIARLAQATQ ERTDLYAKQG RGSQFTSKEE RDKWIKKELK bmy_02807T0/1-765 FNSVKEKEER GIARLAQATQ ERTDLYAKQG RGSQFTSKEE RDKWIKKELK ENSTTRP00000007477/1-1215 FNSVKEKEER GIARLAQATQ ERTDLYAKQG RGSQFTSKEE RDKWIKKELK ENSBTAP00000043550/1-1217 FNSVKEKEER GIARLAQATQ ERTDLYAKQG RGSQFTSKEE RDKWIKKELK 401 450 BACU004637/1-698 SLDQAINDKK RQIAAIHKDL EDTEANKEKN LEQYNKLDQD LNEVKARVEE bmy_02807T0/1-765 SLDQAINDKK RQIAAIHKDL EDTEANKEKN LEQYN----D LNEVKARVEE ENSTTRP00000007477/1-1215 SLDQAINDKK RQIAAIHKDL EDTEANKEKN LEQYNKLDQD LNEVKARVEE ENSBTAP00000043550/1-1217 SLDQAINDKK RQIAAIHKDL EDTEANKEKN LEQYNKLDQD LNEVKARVEE 451 500 BACU004637/1-698 LDRKYYEVKN KKDELQSERN YLWREENAEQ QALAAKREDL EKKQQLLRAA bmy_02807T0/1-765 LDRKYYEVKN KKDELQSERN YLWREENAEQ QALAAKREDL EKKQQLLRAA ENSTTRP00000007477/1-1215 LDRKYYEVKN KKDELQSERN YLWREENAEQ QALAAKREDL EKKQQLLRAA ENSBTAP00000043550/1-1217 LDRKYYEVKN KKDELQSERN YLWREENAEQ QALAAKREDL EKKQQLLRAA 501 550 BACU004637/1-698 TGKAILNGID SINKVLDHFR RKGINQHVQN GYHGIVMNNF ECEPAFYTCV bmy_02807T0/1-765 TGKAILNGID SINKVLDHFR RKGINQHVQN GYHGIVMNNF ECEPAFYTCV ENSTTRP00000007477/1-1215 TGKAILNGID SINKVLDHFR RKGINQHVQN GYHGIVMNNF ECEPAFYTCV ENSBTAP00000043550/1-1217 TGKAILNGID SINKVLDHFR RKGINQHVQN GYHGIVMNNF ECEPAFYTCV 551 600 BACU004637/1-698 EVTAGNRLFY HIVDSDEVST KILMEFNKMN LPGEVTFLPL NKLDVRDTAY bmy_02807T0/1-765 EVTAGNRLFY HIVDSDEVST KILMEFNKMN LPGEVTFLPL NKLDVRDTAY ENSTTRP00000007477/1-1215 EVTAGNRLFY HIVDSDEVST KILMEFNKMN LPGEVTFLPL NKLDVRDTAY ENSBTAP00000043550/1-1217 EVTAGNRLFY HIVDSDEVST KILMEFNKMN LPGEVTFLPL NKLDVRDTAY 601 650 BACU004637/1-698 PETNDAIPMI SKLRYNPRFD KAFKHVFGKT LICRSMEVST QLARAFTMDC bmy_02807T0/1-765 PETNDAIPMI SKLRYNPRFD KAFKHVFGKT LICRSMEVST QLARAFTMDC ENSTTRP00000007477/1-1215 PETNDAIPMI SKLRYNPRFD KAFKHVFGKT LICRSMEVST QLARAFTMDC ENSBTAP00000043550/1-1217 PETNDAIPMI SKLRYNPRFD KAFKHVFGKT LICRSMEVST QLARAFTMDC 651 700 BACU004637/1-698 ITLEGDQVSH RGALTGGYYD TRKSRLELQK DVRKAEEELG ELEAKLNENL bmy_02807T0/1-765 ITLEGDQVSH RGALTGGYYD TRKSRLELQK DVRKAEEELG ELEAKLNENL ENSTTRP00000007477/1-1215 ITLEGDQVSH RGALTGGYYD TRKSRLELQK DVRKAEEELG ELEAKLNENL ENSBTAP00000043550/1-1217 ITLEGDQVSH RGALTGGYYD TRKSRLELQK DVRKAEEELG ELEAKLNENL 701 750 BACU004637/1-698 RRNIENI--- ---------- ---------- ---------- ---------- bmy_02807T0/1-765 RRNIENI--- ---------- ---------- ---------- ---------- ENSTTRP00000007477/1-1215 RRNIERINNE IDQLMNQMQQ IETQQRKFKA SRDSILSEMK MLKEKRQQSE ENSBTAP00000043550/1-1217 RRNIERINNE IDQLMNQMQQ IETQQRKFKA SRDSILSEMK MLKEKRQQSE 751 800 BACU004637/1-698 ---------- ---------- ---------- ---------- ---------- bmy_02807T0/1-765 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007477/1-1215 KTFMPKQRSL QSLEASLHAM ESTRESL-AE LGTDLLSQLS LEDQKRVDAL ENSBTAP00000043550/1-1217 KTFMPKQRSL QSLEASLHAM ESTRESLKAE LGTDLLSQLS LEDQKRVDAL 801 850 BACU004637/1-698 ---------- ---------- ---------- ---------- ---------- bmy_02807T0/1-765 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007477/1-1215 NDEIRQLQQE NRQLLNERIK LEGIITRVET YLNENLRKRL DQVEQELNEL ENSBTAP00000043550/1-1217 NDEIRQLQQE NRQLLNERIK LEGIITRVET YLNENLRKRL DQVEQELNEL 851 900 BACU004637/1-698 ---------- ---------- ---------- ---------- ---------- bmy_02807T0/1-765 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007477/1-1215 RETEGGTVLT ATTSELEAIN KRVKDTMARS EDLDNSIDKT EAGIKELQKS ENSBTAP00000043550/1-1217 RETEGGTVLT ATTSELEAIN KRVKDTMARS EDLDNSIDKT EAGIKELQKS 901 950 BACU004637/1-698 ---------- ---------- ---------- ---------- ---------- bmy_02807T0/1-765 ---------- ---------- ---------- FLL------- ---------- ENSTTRP00000007477/1-1215 MERWKNMEKE HMDAINHDTK ELEKMTNRQG MLLKKKEECM KKIRELGSLP ENSBTAP00000043550/1-1217 MERWKNMEKE HMDAINHDTK ELEKMTNRQG MLLKKKEECM KKIRELGSLP 951 1000 BACU004637/1-698 ---------- ---------- ---------- ---------- ---------- bmy_02807T0/1-765 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007477/1-1215 QEAFEKYQTL SLKQLFRKLE QCNTELKKYS HVNKKALDQF VNFSEQKEKL ENSBTAP00000043550/1-1217 QEAFEKYQTL SLKQLFRKLE QCNTELKKYS HVNKKALDQF VNFSEQKEKL 1001 1050 BACU004637/1-698 ---------- ---------- ---------- ---------- ---------- bmy_02807T0/1-765 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007477/1-1215 IKRQEELDRG YKSIMELMNV LELRKYEAIQ LTFKQVSKNF SEVFQKLVPG ENSBTAP00000043550/1-1217 IKRQEELDRG YKSIMELMNV LELRKYEAIQ LTFKQVSKNF SEVFQKLVPG 1051 1100 BACU004637/1-698 ---------- ---------- ---------- ---------- ---------- bmy_02807T0/1-765 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007477/1-1215 GKATLVMKKG DVEGSQSQDE GEGSGESERG SGSQSSVPSV DQFTGVGIRV ENSBTAP00000043550/1-1217 GKATLVMKKG DVEGSQSQDE GEGSGESERG SGSQSSVPSV DQFTGVGIRV 1101 1150 BACU004637/1-698 ---------- ---------- ---------- ---------- ---------- bmy_02807T0/1-765 ---------- ---------- ---------- --------LF LF-------- ENSTTRP00000007477/1-1215 SFTGKQGEMR EMQQLSGGQK SLVALALIFA IQKCDPAPFY LFDEIDQALD ENSBTAP00000043550/1-1217 SFTGKQGEMR EMQQLSGGQK SLVALALIFA IQKCDPAPFY LFDEIDQALD 1151 1200 BACU004637/1-698 ---------- ---------F LSCVAVEK-- ---------- ---------- bmy_02807T0/1-765 -------TDM IMELAVHAQF ITTTFRPELL ESADKFYGVK FRNKVSHIDV ENSTTRP00000007477/1-1215 AQHRKAVSDM IMELAVHAQF ITTTXXXXXX XSADKFYGVK -RNKVSHIDV ENSBTAP00000043550/1-1217 AQHRKAVSDM IMELAVHAQF ITTTFRPELL ESADKFYGVK FRNKVSHIDV 1201 1250 BACU004637/1-698 ---------- ------- bmy_02807T0/1-765 ITAEMAKDFV EDDTTHG ENSTTRP00000007477/1-1215 ITAEMAKDFV EDDTTHG ENSBTAP00000043550/1-1217 ITAEMAKDFV EDDTTHG