KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:52 2014 Check: 00 .. Name: ENSBTAP00000043553/1-462 Len: 568 Check: 6366 Weight: 1.00 Name: ENSTTRP00000000048/1-472 Len: 568 Check: 3662 Weight: 1.00 Name: ENSP00000349640/1-475 Len: 568 Check: 3804 Weight: 1.00 Name: bmy_05776T0/1-568 Len: 568 Check: 9211 Weight: 1.00 Name: BACU008001/1-449 Len: 568 Check: 6096 Weight: 1.00 // 1 50 ENSBTAP00000043553/1-462 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000048/1-472 MTRGTGRTAQ RGR------- ---------- ---------- ---------- ENSP00000349640/1-475 MTRGTGGTAQ RGR------- ---------- ---------- ---------- bmy_05776T0/1-568 DTFTTTATPP YPRYRGEPEG VAQPLVRRPG SRRASRKPAL ALRLLPSPRR BACU008001/1-449 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000043553/1-462 ------MDKD SQGLLDSSLM ASGTASRSED EESLAGQKRA SSQALGTIPK ENSTTRP00000000048/1-472 ---------S SQGLLDSSLM ASGTASRSED EESLAGQKRA SSQALGTIPK ENSP00000349640/1-475 ------SGPD SQGLLDSSLM ASGTASRSED EESLAGQKRA SSQALGTIPK bmy_05776T0/1-568 NCWSWQPRND SQGLLDSSLM ASGTASRSED EESLAGQKRA SSQALGTIPK BACU008001/1-449 ---------- ---------M ASGTASRSED EESLAGQKRA SSQALGTIPK 101 150 ENSBTAP00000043553/1-462 RRSSSRFIKR KKFDDELVES SLAKSSTRAK GASGVEPGRC SGSEPSSSEK ENSTTRP00000000048/1-472 RRSSSRFIKR KKFDDELVES SLAKSSTRAK GASGVEPGRC SGSEPSSSEK ENSP00000349640/1-475 RRSSSRFIKR KKFDDELVES SLAKSSTRAK GASGVEPGRC SGSEPSSSEK bmy_05776T0/1-568 RRSSSRFIKR KKFDDELVES SLAKSSTRAK GASGVEPGRC SGSEPSSSEK BACU008001/1-449 RRSSSRFIKR KKFDDELVES SLAKSSTRAK GASGVEPGRC SGSEPSSSEK 151 200 ENSBTAP00000043553/1-462 KKVSKTPSTP VPPSPAPAPG LTKRVKKSKQ PLQVTKDLGR WKPADDLLLI ENSTTRP00000000048/1-472 KKVSKAPSTP VPPSPAPAPG LTKRVKKSKQ PLQVTKDLGR WKPADDLLLI ENSP00000349640/1-475 KKVSKAPSTP VPPSPAPAPG LTKRVKKSKQ PLQVTKDLGR WKPADDLLLI bmy_05776T0/1-568 KKVSKAPSTP VPPSPAPAPG LTKRVKKSKQ PLQVTKDLGR WKPADDLLLI BACU008001/1-449 KKVSKAPSTP VPPSPAPAPG LTKRVKKSKQ PLQVTKDLGR WKPADDLLLI 201 250 ENSBTAP00000043553/1-462 SAVL------ ---------- ---------- ---------- ---------- ENSTTRP00000000048/1-472 NAVL------ ---------- ---------- ---------- ---------- ENSP00000349640/1-475 NAVL------ ---------- ---------- ---------- ---------- bmy_05776T0/1-568 NAVLQVVLPT TGVVFAFSPQ PPVPSPPSSP AVSCRWHGRV LPSSKAGANH BACU008001/1-449 NAVL------ ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000043553/1-462 ----QTNDLT SVHLGVKFSC RFTLREVQER WYALLYDPVI SKLACQAMRQ ENSTTRP00000000048/1-472 ----QTNDLT SVHLGVKFSC RFTLREVQER WYALLYDPVI SKLACQAMRQ ENSP00000349640/1-475 ----QTNDLT SVHLGVKFSC RFTLREVQER WYALLYDPVI SKLACQAMRQ bmy_05776T0/1-568 SGAFQTNDLT SVHLGVKFSC RFTLREVQER WYALLYDPVI SKLACQAMRQ BACU008001/1-449 ----QTNDLT SVHLGVKFSC RFTLREVQER WYALLYDPVI SKLACQAMRQ 301 350 ENSBTAP00000043553/1-462 LHPEAIAAIQ SKALFSKAEE QLLSKVGSTS QPTLETFQDL LHRHPDAFYL ENSTTRP00000000048/1-472 LHPEAIAAIQ SKALFSKAEE QLLSKVGSTS QPTLETFQDL LHRHPDAFYL ENSP00000349640/1-475 LHPEAIAAIQ SKALFSKAEE QLLSKVGSTS QPTLETFQDL LHRHPDAFYL bmy_05776T0/1-568 LHPEAIAAIQ SKALFSKAEE QLLSKVGSTS QPTLETFQDL LHRHPDAFYL BACU008001/1-449 LHPEAIAAIQ SKALFSKAEE QLLSKVGSTS QPTLETFQDL LHRHPDAFYL 351 400 ENSBTAP00000043553/1-462 ARTAKALQAH WQLMKQYYLL EDQTVQPLPK GDQVLNFSDA EDLIDDSKLK ENSTTRP00000000048/1-472 ARTAKALQAH WQLMKQYYLL EDQTVQPLPK GDQVLNFSDA EDLIDDSKLK ENSP00000349640/1-475 ARTAKALQAH WQLMKQYYLL EDQTVQPLPK GDQVLNFSDA EDLIDDSKLK bmy_05776T0/1-568 ARTAKALQAH WQLMKQYYLL EDQTVQPLPK GDQVLNFSDA EDLIDDSKLK BACU008001/1-449 ARTAKALQAH WQLMKQYYLL EDQTVQPLPK GDQVLNFSDA EDLIDDSKLK 401 450 ENSBTAP00000043553/1-462 DMRDEVLEHE LTVADRRQKR EIRQLEQELH KWQVLVDSIT GMSSPDFDNQ ENSTTRP00000000048/1-472 EMRDEVLEHE LTVADRRQKR EIRQLEQELH KWQVLVDSIT GMSSPDFDNQ ENSP00000349640/1-475 DMRDEVLEHE LMVADRRQKR EIRQLEQELH KWQVLVDSIT GMSSPDFDNQ bmy_05776T0/1-568 DMRDEVLEHE LTVADRRQKR EIRQLEQELH KWQVLVDSIT GMSSPDFDNQ BACU008001/1-449 DMRDEVLEHE LTVADRRQKR EIRQLEQELH KWQVLVDSIT GMSSPDFDNQ 451 500 ENSBTAP00000043553/1-462 TLAVLRGRMV RYLMRSREIT LGRATKDNQI DVDLSLEGPA WKISRKQGVI ENSTTRP00000000048/1-472 TLAVLRGRMV RYLMRSREIT LGRATKDNQI DVDLSLEGPA WKISRKQGVI ENSP00000349640/1-475 TLAVLRGRMV RYLMRSREIT LGRATKDNQI DVDLSLEGPA WKISRKQGVI bmy_05776T0/1-568 TLAVLRGRMV RYLMRSREIT LGRATKDNQI DVDLSLEGPA WKISRKQGVI BACU008001/1-449 TLAVLRGRMV RYLMRSREIT LGRATKDNQI DVDLSLEGPA WKISRKQGVI 501 550 ENSBTAP00000043553/1-462 KLKNNGDFFI ANEGRRPIYI DGRPVLCGSK WRLSNNSVVE IASLRFVFLI ENSTTRP00000000048/1-472 KLKSNGDFFI ANEGRRPIYI DGRPVLCGSK WRLSNNSVVE IASLRFVFLI ENSP00000349640/1-475 KLKNNGDFFI ANEGRRPIYI DGRPVLCGSK WRLSNNSVVE IASLRFVFLI bmy_05776T0/1-568 KLKNNGDFFI ANEGRRPIYI DGRPVLCGSK WRLSNNSVVE IASLRFVFLI BACU008001/1-449 KLKNNGDFFI ANEGRRPIYI DGRPVLCGSK WRLSNNSVVE IASLRFVFLI 551 600 ENSBTAP00000043553/1-462 NQDLIALIRA EAAKITPQ ENSTTRP00000000048/1-472 NQDLIALIRA EAAKITPQ ENSP00000349640/1-475 NQDLIALIRA EAAKITPQ bmy_05776T0/1-568 NQDLIALIRA EAAKITPQ BACU008001/1-449 NQDLIALIRA EAAKITPQ