KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:54:54 2014 Check: 00 .. Name: ENSP00000357922/1-341 Len: 432 Check: 2101 Weight: 1.00 Name: ENSBTAP00000043576/1-307 Len: 432 Check: 6398 Weight: 1.00 Name: bmy_11129T0/1-428 Len: 432 Check: 6493 Weight: 1.00 Name: BACU007240/1-416 Len: 432 Check: 5397 Weight: 1.00 // 1 50 ENSP00000357922/1-341 MVPAAGALLW VLLLNLGPRA AGAQGLTQTP TEMQRVSLRF GGPMTRSYRS ENSBTAP00000043576/1-307 MVPAAGALLW ALLLSLGPRA AGAEGLTSTA --MPRDSFRF GGPMTRSYRT bmy_11129T0/1-428 MVPAAGALLW ALLLSLGPRA AGAEGLTSTA --MPRDSLRF GGPMTRSYRT BACU007240/1-416 MVPAAGALLW ALLLSLGPRA AGAEGLTSTA --MPRNSLRF GGPMTRSYRT 51 100 ENSP00000357922/1-341 TARTG---LP RKTRIILEDE NDAMADADRL AGPAAAELLA ATVSTGFSRS ENSBTAP00000043576/1-307 TSRTAPGVVS PRMRVTMEDE DDVLAAADRL AGPAAAELLA STVATG-SRS bmy_11129T0/1-428 TARSTRSVVS QKMRVTMEDE DDVVAVADSL AGPAAAELLA STVSTG-SRS BACU007240/1-416 TARSTRSVVS QKMRVTMEDE DDVVAVADSL AGPAAAELLA STVSTG-SRS 101 150 ENSP00000357922/1-341 SAINEEDGSS EEGVVINAGK DSTSRELPSA TPNTAGSSST RFIANSQEPE ENSBTAP00000043576/1-307 RLSQEEDGSL EEGVVIYARK NDTESETDST TRITPGRPSP YLTANDQDSD bmy_11129T0/1-428 RLSAEEDGSL EEGVVIYARK NNTELETHNT ASSTPGGPSP GFTANDQDSE BACU007240/1-416 RLSAEEDGSL EEGVVIYARK NNTELETHNT TSSTPGGPSP GFTANDQYSE 151 200 ENSP00000357922/1-341 IRLTSSLPRS PGRSTEDLPG SQATLSQWST PGSTPSRWPS PSPTAMPSPE ENSBTAP00000043576/1-307 IKMSSSLPHS SWKANVDSQP SDSTTNPWSS AGSTLNQWPP PSPTAMPAPE bmy_11129T0/1-428 IRMSSSQRPS TWKANVDHLL SDTTLNQWST ARSTRNQWPP PSPTAMPAPE BACU007240/1-416 IRMSSSQRPS TWKANVDQLL SDTTLNQWST ARSTRNQWPP PSPTAMPAPE 201 250 ENSP00000357922/1-341 DLRLVLMPWG PWHCHCKSGT MSRSRSGKLH GLSGRLRVGA LSQLRTEHKP ENSBTAP00000043576/1-307 DLRLVLLPWG PWHCHCKSGT MSRTRAGRLH GLSGRLRVGA LSQLRTEHRP bmy_11129T0/1-428 DLRLVLMPWG PWHCHCKSGT MSRTRAGKLR GLSGRLRVGA LSQLRTEHRP BACU007240/1-416 DLRLVLMPWG PWHCHCKSGT MSRTRAGKLR GLSGRLRVGA LSQLRTEHRP 251 300 ENSP00000357922/1-341 CTYQQCPCNR LREECPLDTS LCTDTNCASQ STTSTRTTTT PFPTI--HLR ENSBTAP00000043576/1-307 CTYHLCPCNR EREECPLDAD K-EKSEVMAT STTRGGVSIS TSP------- bmy_11129T0/1-428 CTYHQCPCNR EREECPLDAG LCPDTSCTTQ TTTRA-TTTT PLPPLVSRLR BACU007240/1-416 CTYHQCPCNR EREECPLDAG LCPDTSCTTQ TTTRA-TTAT PFPPLVSRLR 301 350 ENSP00000357922/1-341 SSPSLPPASP CPALAFWKRV RIGLEDIWNS LSSVFTEMQP -IDRNQ---- ENSBTAP00000043576/1-307 -----PPRIP VPT------- ---------- -GYIFS---- -TEKQN---- bmy_11129T0/1-428 PTPFIPSLRP NPALAFWKRV RTGLEDIWNS LSTVFTEMQP EVMRDPVSSQ BACU007240/1-416 PTPFIPSLRP NPALAFWKRV RTGLEDIWNS LSTVFTEMQP -INRNQ---- 351 400 ENSP00000357922/1-341 -------R-- ---------- ---------- ---------- ---------- ENSBTAP00000043576/1-307 ---------- ---------- ---------- ---------- ---------- bmy_11129T0/1-428 YSSFLFWRMP IPELDLSELE GLGLSDTSTY KIKDSSVGKT TGQATGAEQE BACU007240/1-416 -------RMP IPELDLSELE GLGLSDTSTY KIKDSSVGKT TGQAAGAQQE 401 450 ENSP00000357922/1-341 ---------- ---------- ---------- -- ENSBTAP00000043576/1-307 ---------- ---------- ---------- -- bmy_11129T0/1-428 KNPEGDALLE YSTFNFWRAP IASIHSFELD LL BACU007240/1-416 KNPEGDALLE YSTFNFWRAP IASIHSFELD LL