KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:54 2014 Check: 00 .. Name: ENSTTRP00000003888/1-123 Len: 358 Check: 3345 Weight: 1.00 Name: bmy_18104T0/1-345 Len: 358 Check: 7470 Weight: 1.00 Name: ENSBTAP00000043581/1-235 Len: 358 Check: 9143 Weight: 1.00 Name: ENSP00000297157/1-221 Len: 358 Check: 8034 Weight: 1.00 Name: BACU005819/1-179 Len: 358 Check: 5932 Weight: 1.00 // 1 50 ENSTTRP00000003888/1-123 ---------- ---------- ---------- ---------- ---------- bmy_18104T0/1-345 MPHFTVTKVE DTEEGAAASV SQEGAPSLAE IKARIQHSDE SGIMQEFYCL ENSBTAP00000043581/1-235 ---------- ---------- ---------- ---------- ---------- ENSP00000297157/1-221 ---------- ---------- ---------- ---------- ---------- BACU005819/1-179 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000003888/1-123 ---------- ---------- ---------- ---------- ---------- bmy_18104T0/1-345 LRLLNQNISK CRIFFQTMLK IERYEQIHSL AIPDNLFKAI VLYFRARKIR ENSBTAP00000043581/1-235 ---------- ---------- ---------- ---------- ---------- ENSP00000297157/1-221 ---------- ---------- ---------- ---------- ---------- BACU005819/1-179 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000003888/1-123 ---------- ---------- ---------- ---------- ---------- bmy_18104T0/1-345 ITEPESELHH RGTQPAVSFF SCCFYSQLGF AAPHGAAMSF QPGCDDSGAG ENSBTAP00000043581/1-235 ---------- ---------- -SSPRGRAAS AAPRGAAMSS RARRDDAGAG ENSP00000297157/1-221 ---------- ---------- ---------- -------MSS RPGREDVGAA BACU005819/1-179 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000003888/1-123 ---------- ---------- ---------- ---------- --------ED bmy_18104T0/1-345 GARRPWEPPE QEL------K RRRHDAQHLQ QLKRLESFYE KSPPGLIKED ENSBTAP00000043581/1-235 GARRPREPPE QELQRRRELK RRRQDAQQLQ QLKHLESFYE KPPPGFIKED ENSP00000297157/1-221 GARRPREPPE QELQRRREQK RRRHDAQQLQ QLKHLESFYE KPPPGLIKED BACU005819/1-179 ---------- ---------- ---------M TSVFFLSSYE KPPPGLIKED 201 250 ENSTTRP00000003888/1-123 ETKPEDCIPD VP-NEHAREX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_18104T0/1-345 ETKPEDCIPD VPGNEHAREF LAHAPTKGLW MPLGKEVKIM RCWCCKRYGH ENSBTAP00000043581/1-235 ETKPEDCIPD VPGNEHAREF LAHAPTKGLW MPLGKEVKVM QCWRCKRYGH ENSP00000297157/1-221 ETKPEDCIPD VPGNEHAREF LAHAPTKGLW MPLGKEVKVM QCWRCKRYGH BACU005819/1-179 ETKPEDCIPD VPGNEHAREF LAHAPTKGLW MPLGKEVKVM QCWRCKRYGH 251 300 ENSTTRP00000003888/1-123 XXXXXXXXXX XXXXXXXXXX XXAHEDPMYD IIRENKRHEK DVRIQQLKQL bmy_18104T0/1-345 QTGDKECPFF IKGNQKLEQF RVAHEDPMYD IIRENKRHEK DVRIRQLKQL ENSBTAP00000043581/1-235 RTGDKECPFF IKGNQKLEQF RVAHEDPMYD IIRENKRHEK DIRIQQLKQL ENSP00000297157/1-221 RTGDKECPFF IKGNQKLEQF RVAHEDPMYD IIRDNKRHEK DVRIQQLKQL BACU005819/1-179 RTGDKECPFF IKGNQKLEQF RVAHEDPMYD IIRENKRHEK DVRIQQLKQL 301 350 ENSTTRP00000003888/1-123 LEDSTSDEDG SSSSSSECKE KH-------- ---------- ---------- bmy_18104T0/1-345 LEDSTSDEDG SSSSSSECKE KYKKKKE--- ----EKHKKK KKKRKHKSSK ENSBTAP00000043581/1-235 LEDSTSDDDG SSSSSSEDKE KHKKKKKKEK HKKKKKEKKK KKKRKHKSSK ENSP00000297157/1-221 LEDSTSDEDR SSSSSSEGKE KHKKKKKKEK HKKRKKEKKK KKKRKHKSSK BACU005819/1-179 LEDSTSDEDG SSSSSSECKE KHKKKKKKEK HKKKKKEKKK KKKRKHKSSK 351 400 ENSTTRP00000003888/1-123 -------- bmy_18104T0/1-345 SNESSDSE ENSBTAP00000043581/1-235 SNESSD-- ENSP00000297157/1-221 SNEGSDSE BACU005819/1-179 SNESSDSE