KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:55 2014 Check: 00 .. Name: ENSBTAP00000043609/1-901 Len: 919 Check: 3088 Weight: 1.00 Name: ENSP00000370695/1-894 Len: 919 Check: 597 Weight: 1.00 Name: BACU000669/1-488 Len: 919 Check: 7791 Weight: 1.00 Name: bmy_09823T0/1-904 Len: 919 Check: 4544 Weight: 1.00 Name: ENSTTRP00000014041/1-844 Len: 919 Check: 7322 Weight: 1.00 // 1 50 ENSBTAP00000043609/1-901 MTAIKHALQR DIFTPNDERL LSIVNVCKAG KKKKNCFLCA TVTTERPVQV ENSP00000370695/1-894 MTAIKHALQR DIFTPNDERL LSIVNVCKAG KKKKNCFLCA TVTTERPVQV BACU000669/1-488 ---------- ---------- ---------- ---------- ---------- bmy_09823T0/1-904 MTAIKHALQR DIFTPNDERL LSIVNVCKAG KKKKNCFLCA TVTTERPVQV ENSTTRP00000014041/1-844 MTAIKHALQR DIFTPNDERL LSIVNVCKAG KKKKNCFLCA TVTTERPVQV 51 100 ENSBTAP00000043609/1-901 KVVKVKKSDK GDFYKRQIAW ALRDLAVVDA KDAIKENPEF DLHFEKIYKW ENSP00000370695/1-894 KVVKVKKSDK GDFYKRQIAW ALRDLAVVDA KDAIKENPEF DLHFEKIYKW BACU000669/1-488 ---------- ---------- ---------- ---------- ---------- bmy_09823T0/1-904 KVVKVKKSDK GDFYKRQIAW ALRDLAVVDA KDAIKENPEF DLHFEKIYKW ENSTTRP00000014041/1-844 KVVKVKKSDK GDFYKRQIAW ALRDLAVVDA KDAIKENPEF DLHFEKIYKW 101 150 ENSBTAP00000043609/1-901 VASSTAEKNA FISCIWKLNQ RYLRKKIDFV NVSSQLLEEL PKVTEESVPS ENSP00000370695/1-894 VASSTAEKNA FISCIWKLNQ RYLRKKIDFV NVSSQLL--- ----EESVPS BACU000669/1-488 ---------- ---------- ---------- ---------- ---------- bmy_09823T0/1-904 VASSTAEKNA FISCIWKLNQ RYLRKKIDFV NVSSQLLEEL PKVTEESVPS ENSTTRP00000014041/1-844 VASSTAEKNA FISCIWKLNQ RYLRKKIDFV NVSSQLL--- ----EESVPS 151 200 ENSBTAP00000043609/1-901 GENQSVTGGD EEAVDEYQEL NAREEQDIEI MMEGCEYAIS NAEAFAERLS ENSP00000370695/1-894 GENQSVTGGD EEVVDEYQEL NAREEQDIEI MMEGCEYAIS NAEAFAEKLS BACU000669/1-488 ---------- ---------- ---------- ---------- ---------- bmy_09823T0/1-904 GENQSVTGGD EEAVDEYQEL NAREEQDIEI MMEGCEYAIS NAEAFAERLS ENSTTRP00000014041/1-844 GENQSVTGGD EEAVDEYQEL NAREEQDIEI MMEGCEYAIS NAEAFAERLS 201 250 ENSBTAP00000043609/1-901 RELQVLDGAN IQSIMASEKQ VNILMKLLDE ALKEVDQIEL KLSSYEEMLQ ENSP00000370695/1-894 RELQVLDGAN IQSIMASEKQ VNILMKLLDE ALKEVDQIEL KLSSYEEMLQ BACU000669/1-488 ---------- ---------- ---------- ---------- ---------- bmy_09823T0/1-904 RELQVLDGAN IQSIMASEKQ VNILMKLLDE ALKEVDQIEL KLSSYEEMLQ ENSTTRP00000014041/1-844 RELQVLDGAN IQSIMASEKQ VNILMNLLDE ALKEVDQIEL KLSSYEEMLQ 251 300 ENSBTAP00000043609/1-901 SVKEQMDQIS ESNHLIHLSN TNNVKLLSEI EFLVNHMDLA KGHIKALQEG ENSP00000370695/1-894 SVKEQMDQIS ESNHLIHLSN TNNVKLLSEI EFLVNHMDLA KGHIKALQEG BACU000669/1-488 ---------- ---------- ---------- ---------- ---------- bmy_09823T0/1-904 SVKEQMDQIS ESNHLIHLSN TNNVKLLSEI EFLVNHMDLA KGHIKALQEG ENSTTRP00000014041/1-844 SVKEQMDQIS ESNHLIHLSN TNNVKLLSEI EFLVNHMDLA KGHIKALQEG 301 350 ENSBTAP00000043609/1-901 DLSSSRGIEA CTNAADALLQ CMNVALRPGH DMLLAVEQQQ QRFSDLRENF ENSP00000370695/1-894 DLASSRGIEA CTNAADALLQ CMNVALRPGH DLLLAVKQQQ QRFSDLRELF BACU000669/1-488 ---------- ---------- ---------- ---------- ---------- bmy_09823T0/1-904 DLASSRGIEA CTNAADALLQ CMNVALRPGH DMLLAVKQQQ QRFSDLREHF ENSTTRP00000014041/1-844 DLASSRGIEA CTNAADALLQ CMNVALRPGH DMLLAVKQQQ QRFSDLREHF 351 400 ENSBTAP00000043609/1-901 ARRLASHLNN VFVQQ----- ---------- ---GHDQSST LAQHSVELTL ENSP00000370695/1-894 ARRLASHLNN VFVQQ----- ---------- ---GHDQSST LAQHSVELTL BACU000669/1-488 ---------- ---------- ---------- ---------- ---------- bmy_09823T0/1-904 ARRLASHLNN VFVQQFTQAL LQLYNRSYFL SVPGHDQSST LAQHSVELTL ENSTTRP00000014041/1-844 ARRLASHLNN VFVQQ----- ---------- ---GHDQSST LAQHSVELTL 401 450 ENSBTAP00000043609/1-901 PNHHPFHRDL LRYAKLMEWL KSTDYRKYEG LTKNYMDYLS RLYEREIKDF ENSP00000370695/1-894 PNHHPFHRDL LRYAKLMEWL KSTDYGKYEG LTKNYMDYLS RLYEREIKDF BACU000669/1-488 ---------- ------MEWL KSTDYGKYEG LTKNYMDYLS RLYEREIKDF bmy_09823T0/1-904 PNHHPFHRDL LRYAKLMEWL KSTDYGKYEG LTKNYMDYLS RLYEREIKDF ENSTTRP00000014041/1-844 PNHHPFHRDL LRYAKLMEWL KSTDYGKYEG LTKNYMDYLS RLYEREIKDF 451 500 ENSBTAP00000043609/1-901 FEVAKIKMTG TTKESKKFAT LPRKESAVKQ ETESLHGSSG KLTGSTSSLN ENSP00000370695/1-894 FEVAKIKMTG TTKESKKFAT LPRKESAVKQ ETESLHGSSG KLTGSTSSLN BACU000669/1-488 FEVAKIKMTG TTKESKKFG- ---------- ----LHGSSG KLTGSTSSLN bmy_09823T0/1-904 FEVAKIKMTG TTKESKKFG- ---------- ----LHGSSG KLTGSTSSLN ENSTTRP00000014041/1-844 FEVAKIKMTG TTKESKKFAT LPRKESAVKQ ETESLHGSSG KLTGSTSSLN 501 550 ENSBTAP00000043609/1-901 KLSVQSSGNR RSQSSSLLDM GNMSASDLDV ADRTKFDKIF EQVLSELEPL ENSP00000370695/1-894 KLSVQSSGNR RSQSSSLLDM GNMSASDLDV ADRTKFDKIF EQVLSELEPL BACU000669/1-488 KLSVQSSGNR RSQSSSLLDM GNMSASDLDV ADRTKFDKIF EQVLSELEPL bmy_09823T0/1-904 KLSVQSSGNR RSQSSSLLDM GNMSASDLDV ADRTKFDKIF EQVLSELEPL ENSTTRP00000014041/1-844 KLSVQSSGNR RSQSSSLLDM GNMSASDLDV ADRTKFDKIF EQVLSELEPL 551 600 ENSBTAP00000043609/1-901 CLAEQDFISK FFKLQQHQSM PGTVTEGEDT DGGTLSRQHN AGTPLPVSSE ENSP00000370695/1-894 CLAEQDFISK FFKLQQHQSM PGTMAEAEDL DGGTLSRQHN CGTPLPVSSE BACU000669/1-488 CLAEQDFISK FFKLQQHQSM PGTMTEAEDL DGGTSSRQHN AGTPLPVSSE bmy_09823T0/1-904 CLAEQDFISK FFKLQQHQSM PGTMTEAEDL DGGTSSRQHN AGTPLPVSSE ENSTTRP00000014041/1-844 CLAEQDFISK FFKLQQHQSM PGTMTEAEEL DGGTSSRQHN AGTPLPVSSE 601 650 ENSBTAP00000043609/1-901 KDMIRQMMIK IFRCIEPELN NLIALGDKID SFNSLYMLVK MSHHVWTAQN ENSP00000370695/1-894 KDMIRQMMIK IFRCIEPELN NLIALGDKID SFNSLYMLVK MSHHVWTAQN BACU000669/1-488 KDMIRQMMIK IFRCIEPELN NLIALGDKID SFNSLYMLVK MSHHVWTAQN bmy_09823T0/1-904 KDMIRQMMIK IFRCIEPELN NLIALGDKID SFNSLYMLVK MSHHVWTAQN ENSTTRP00000014041/1-844 KDMIRQMMIK IFRCIEPELN NLIALGDKID SFNSLYMLVK MSHHVWTAQN 651 700 ENSBTAP00000043609/1-901 VDPASFLSTT LGNVLVTVKR NFDKCISNQI RQMEEVKISK KSKVGILPFV ENSP00000370695/1-894 VDPASFLSTT LGNVLVTVKR NFDKCISNQI RQMEEVKISK KSKVGILPFV BACU000669/1-488 VDPASFLSTT LGNVLVTVKR NFDKCISNQI RQMEEVKISK KSKVGILPFV bmy_09823T0/1-904 VDPASFLSTT LGNVLVTVKR NFDKCISNQI RQMEEVKISK KSKVGILPFV ENSTTRP00000014041/1-844 VDPASFLSTT LGNVLVTVKR NFDKCISNQI RQMEEVKISK KSKVGILPFV 701 750 ENSBTAP00000043609/1-901 AEFEEFAGLA ESIFKNAERR GDLDKAYTKL IRGVFVNVEK VANESQKTPR ENSP00000370695/1-894 AEFEEFAGLA ESIFKNAERR GDLDKAYTKL IRGVFVNVEK VANESQKTPR BACU000669/1-488 AEFEEFAGLA ESIFKNAERR GNQDKAYTKL IRGVFVNVEK VANESQKTPR bmy_09823T0/1-904 AEFEEFAGLA ESIFKNAERR GDLDKAYTKL IRGVFVNVEK VANESQKTPR ENSTTRP00000014041/1-844 AEFEEFAGLA ESIFKNAERR GDLDKAYTKL IRGVFVNVEK VANESQKTPR 751 800 ENSBTAP00000043609/1-901 DVVMMENFHH IFATLSRLKI SCLEAEKKEA KQKYTDHLQS YVIYSLGQPL ENSP00000370695/1-894 DVVMMENFHH IFATLSRLKI SCLEAEKKEA KQKYTDHLQS YVIYSLGQPL BACU000669/1-488 DVVMMENFHH IFATLSRLKI SCLEAEKKEA KQKYTDHLQS YVIYSLGQPL bmy_09823T0/1-904 DVVMMENFHH IFATLSRLKI SCLEAEKKEA KQKYTDHLQS YVIYSLGQPL ENSTTRP00000014041/1-844 DVVMMENFHH IFATLSRLKI SCLEAEKKEA KQKYTDHLQS YVIYSLGQPL 801 850 ENSBTAP00000043609/1-901 EKLNHFFEGV EARVAQGIRE EEVSYQLAFN KQELRKVIKE YPGKEVKKGL ENSP00000370695/1-894 EKLNHFFEGV EARVAQGIRE EEVSYQLAFN KQELRKVIKE YPGKEVKKGL BACU000669/1-488 EKLNHFFEGV EARVAQGIRE EEVSYQLAFN KQELRKVIKE YPGKEVKKGL bmy_09823T0/1-904 EKLNHFFEGV EARVAQGIRE EEVSYQLAFN KQELRKVIKE YPGKEVKKGL ENSTTRP00000014041/1-844 EKLNHFFEGV EARVAQGIRE EEVSYQLAFN KQELRKVIKE YPGKEVKKGL 851 900 ENSBTAP00000043609/1-901 DNLYKKVDKH LCEEENLLQV VWHSMQDEFI RQYKHFEGLI ARCYPGSGVT ENSP00000370695/1-894 DNLYKKVDKH LCEEENLLQV VWHSMQDEFI RQYKHFEGLI ARCYPGSGVT BACU000669/1-488 DNLYKKVDKH LCEEENLLQV VWHSMQDEFI RQYKHFEGLI ARCYPGSGVT bmy_09823T0/1-904 DNLYKKVDKH LCEEENLLQV VWHSMQDEFI RQYKHFEGLI ARCYPGSGVT ENSTTRP00000014041/1-844 DNLYKKVDKH LCEEENLLQ- ---------- ---------- ---------- 901 950 ENSBTAP00000043609/1-901 MEFTIQDILD YCSSIAQSH ENSP00000370695/1-894 MEFTIQDILD YCSSIAQSH BACU000669/1-488 MEFTIQDILD YCSSIAQSH bmy_09823T0/1-904 MEFTIQDILD YCSSIAQSH ENSTTRP00000014041/1-844 ---------- ---------