KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:55 2014 Check: 00 .. Name: ENSP00000315626/1-135 Len: 276 Check: 6373 Weight: 1.00 Name: bmy_01486T0/1-223 Len: 276 Check: 3358 Weight: 1.00 Name: BACU013664/1-276 Len: 276 Check: 474 Weight: 1.00 Name: ENSTTRP00000000312/1-201 Len: 276 Check: 1292 Weight: 1.00 Name: ENSBTAP00000043630/1-150 Len: 276 Check: 8097 Weight: 1.00 // 1 50 ENSP00000315626/1-135 ---------- ---------- ---------- ---------- ---------- bmy_01486T0/1-223 ---------- ---------M GFPMDPAKQA SRKPGLEWCG ATLVPG-GEL BACU013664/1-276 MVGHLHLQGM EESLKEKSRE GLLDSPDSGL PPSPSPSPPF YSLAPGILDA ENSTTRP00000000312/1-201 ----LHLQGM EESLKEKSRE GLLDSPDSGL PPSPSPSPPF YSLAPGILDA ENSBTAP00000043630/1-150 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000315626/1-135 ---------- ---------- ---------- -MRPRMLPVF FGESIKVNPE bmy_01486T0/1-223 RLQCQRAAHV TLCPWLSPQP LPLPPSTPAR EMRPRMLPVF FGESIEVNPE BACU013664/1-276 RAGGSGASSE APGPGEAKAP LPLPPSSPAR EMRPRMLPVF FGESIEVNPE ENSTTRP00000000312/1-201 R--------- --CPWLSPQP LPLPPSTPAR AMRPRMLPVF FGESIEVNPE ENSBTAP00000043630/1-150 ---------- ------SPQP PAHPPSTPAR EMRPRMLPVF FGESIEVNPE 101 150 ENSP00000315626/1-135 PTHEIRCNSE VKYASEKHFQ DKVFYAPVPT VTAYSETIVA APNCTWRNYR bmy_01486T0/1-223 PTPEIRCNSE VKYASEKHFR DKVFYAPVPT VTAYSETIVA APNCTWRSYR BACU013664/1-276 PTPEIRCNSE VKYASEKHFR DKVFYAPVPT VTAYSETIVA APNCTWRSYR ENSTTRP00000000312/1-201 PTPEIRCNSE VKYASEKHFR DKVFYAPVPT VTAYSETIVA APNCTWRSYR ENSBTAP00000043630/1-150 PTPEIRCNSE VKYASEKHFR DKVFYAPVPT VTAYSETIVA APNCTWRNYR 151 200 ENSP00000315626/1-135 SQLTLEPRPR ALRFRSTTII FPKHARSTFR TTLHCSLGRP SRWFTASVQL bmy_01486T0/1-223 SQLTLEPRPR ALRFRSTTII FPKRARSSFR TTLHLSLGRP RRWFTASVQL BACU013664/1-276 SQLTLEPRPR ALRFRSTTII FPKRARSSFR TTLHLSLGRP RRWFTASVQL ENSTTRP00000000312/1-201 SQLTLEPRPR ALRFRSTTII FPKRARSSFR TTLHLSLGRP RRWFTASVQL ENSBTAP00000043630/1-150 SQLTLEPRPR ALRFRSTTII FPKCASNSFR TTLHLSLGRP RCWFTASVQL 201 250 ENSP00000315626/1-135 QLC------- ------QDPA --PSLLGPAT L--------- ---------- bmy_01486T0/1-223 QLC------- ------PRPG --PGXXXXXG GRRTGSTIRR DPGLCLARAA BACU013664/1-276 XXXXXXXXXX XAGGRAPRSG GTPGCVLPAP HPLSQHLPGE AAWAWLSRGA ENSTTRP00000000312/1-201 QLC------- ------PRPG --PGLLGPAP L--------- ---------- ENSBTAP00000043630/1-150 QLC------- ------PRPG --PGLLGPTP L--------- ---------- 251 300 ENSP00000315626/1-135 ---------- ---------- ------ bmy_01486T0/1-223 SAFSAPIR-- ---------- ------ BACU013664/1-276 RGGGRWVGGA RPDGLGEKKV CVPGCP ENSTTRP00000000312/1-201 ---------- ---------- ------ ENSBTAP00000043630/1-150 ---------- ---------- ------