KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:54:58 2014 Check: 00 .. Name: ENSP00000310520/1-916 Len: 916 Check: 9980 Weight: 1.00 Name: ENSBTAP00000043645/1-916 Len: 916 Check: 1393 Weight: 1.00 Name: BACU012945/1-622 Len: 916 Check: 8051 Weight: 1.00 Name: bmy_05415T0/1-862 Len: 916 Check: 7030 Weight: 1.00 Name: ENSTTRP00000008876/1-914 Len: 916 Check: 4583 Weight: 1.00 // 1 50 ENSP00000310520/1-916 MESGQPARRI AMAPLLEYER QLVLELLDTD GLVVCARGLG ADRLLYHFLQ ENSBTAP00000043645/1-916 MEPGSPARVT AMAPLLEYER QLVLELLDAD GLVVCARGLG ADRLLYHFLR BACU012945/1-622 MEPGLPARET AMAPLLEYER QLVLELLEAD GLVVCARGLG ADRLLYHFLR bmy_05415T0/1-862 MEPGLPARET AMAPLLEYER QLVLELLEAD GLVVCARGLG ADRLLYHFLR ENSTTRP00000008876/1-914 MEPGLPARET AMAPLLEYER QLVLELLDAD GLVVCARGLG ADRLLYHFLR 51 100 ENSP00000310520/1-916 LHCHPACLVL VLNTQPAEEE YFINQLKIEG VEHLPRRVTN EITSNSRYEV ENSBTAP00000043645/1-916 LHCHPACLVL VLNTQPAEEE YFINQLKIEG VEHLPRRVTN EITGSNRYEV BACU012945/1-622 LHCHPACLVL VLNPQPAEEE YFINQLKIEG VEHLPRRVTN EITSSNRYEV bmy_05415T0/1-862 LHCHPACLVL VLNTQPAEEE YFINQLKIEG VEHLPRRVTN EITSSSRYEV ENSTTRP00000008876/1-914 LHCHPACLVL VLNTQPAEEE YFINQLKLEG VEHLPRRVTN EITSSNRYEV 101 150 ENSP00000310520/1-916 YTQGGVIFAT SRILVVDFLT DRIPSDLITG ILVYRAHRII ESCQEAFILR ENSBTAP00000043645/1-916 YTQGGVIFAT SRILVVDFLT DRIPSDLITG ILVYRAHRII ESCQEAFILR BACU012945/1-622 YTQGGVIFAT SRILVVDFLT DRIPSDLITG ILVYRAHRII ESCQEAFILR bmy_05415T0/1-862 YTQGGVIFAT SRILV----- ---------- ---------- ---------- ENSTTRP00000008876/1-914 YTQGGVIF-T SRILVVDFLT DRIPSDLITX XXXXXXXXXX XXXXXXXXXX 151 200 ENSP00000310520/1-916 LFRQKNKRGF IKAFTDNAVA FDTGFCHVER VMRNLFVRKL YLWPRFHVAV ENSBTAP00000043645/1-916 LFRQKNKRGF IKAFTDNAVA FDTGFCHVER VMRNLFVRKL YLWPRFHVAV BACU012945/1-622 LFRQKNKRGF IKAFTDNAIA FDTGFCHVER VMRNLFVRKL YLWPRFHVAV bmy_05415T0/1-862 ----KNKHGF IKAFTDNAIA FDTGFCHVER VMRNLFIRKL YLWPRFHVAV ENSTTRP00000008876/1-914 LFRQK-KHGF IKAFTDNAIA FDTGFCHVER VMRNLFIRKL YLWPRFHVAV 201 250 ENSP00000310520/1-916 NSFLEQHKPE VVEIHVSMTP TMLAIQTAIL DILNACLKEL KCHNPSLEVE ENSBTAP00000043645/1-916 NSFLELHKPE VVEIHVSMTP AMLAIQTAIL DILNACLKEL KCHNPSLEVE BACU012945/1-622 NSFLEQHKPE VVEIHVSMTP AMLAIQTAIL DILNACLKEL KCHNPSLEVE bmy_05415T0/1-862 NSFLEQHKPE VVEIHVSMTP AMLAIQTAIL DILNACLKEL KCHNPSLEVE ENSTTRP00000008876/1-914 NSFLEQHKPE VVEIHVSMTP AMLAIQTAIL DILNACLKEL KCHNPSLEVE 251 300 ENSP00000310520/1-916 DLSLENAIGK PFDKTIRHYL DPLWHQLGAK TKSLVQDLKI LRTLLQYLSQ ENSBTAP00000043645/1-916 DLSLENAIGK PFDKTIRHYL DPLWHQLGAK TKSLVQDLKI LRTLLQYLSQ BACU012945/1-622 DLSLENAIGK PFDKTIRHYL DPLWHQLGAK TKSLVQDLKI LRTLLQYLSQ bmy_05415T0/1-862 DLSLENAIGK PFDKTIRHYL DPLWHQLGAK TKSLVQDLKI LRTLLQYLSQ ENSTTRP00000008876/1-914 DLSLENAIGK PFDKTIRHYL DPLWHQLGAK TKSLVQDLKI LRTLLQYLSQ 301 350 ENSP00000310520/1-916 YDCVTFLNLL ESLRATEKAF GQNSGWLFLD SSTSMFINAR ARVYHLPDAK ENSBTAP00000043645/1-916 YDCITFLNLL ESLRATEKAF GQNSGWLFLD SSTSMFVNAR ARVYHVPDAK BACU012945/1-622 YDCITFLHLL ESLRATEKAF GQNSGWLFLD SSTSMFVNAR ARVYHVPDAK bmy_05415T0/1-862 YDCITFLNLL ESLRATEKAF GQNSGWLFLD SSTSMFVNAR ARVYHVPDAK ENSTTRP00000008876/1-914 YDCVTFLNLL ESLKATEKAF GQNSGWLFLD SSTSMFINAR ARVYHVPDAK 351 400 ENSP00000310520/1-916 MSKKEKISEK MEIKEGEETK KELVLESNPK WEALTEVLKE IEAENKESEA ENSBTAP00000043645/1-916 MSKKSRLPEK LEIKEEQETK KDLVLESNPK WAALTEVLKE IEAENKESEV BACU012945/1-622 MSKKGKLPEK LEIKEEQETR KELVLESNPK WEALSEVLKE IEAENTESEA bmy_05415T0/1-862 MSKKGKLPEK LEIKEEQETR KELVLESNPK WEALSEVLKE IEAENKESEA ENSTTRP00000008876/1-914 MSKKGKLPEK LEIKEEQETR KELVLENNPK WEALSEVLKE IEAENKESEA 401 450 ENSP00000310520/1-916 LGGPGQVLIC ASDDRTCSQL RDYITLGAEA FLLRLYRKTF EKDSKAEEVW ENSBTAP00000043645/1-916 LGGPGQVLIC ASDDRTCSQL REYLTVGAEV FLLRLYRKTF EKDSKAEDVW BACU012945/1-622 LGGPGHVLIC ASDDRTCSQL REYIAVGAET FLLRLYRKTF EKDSKAEDVW bmy_05415T0/1-862 LGGPGHVLIC ASDDRTCSQL REYIAVGAEA FLLRLYRKTF EKDSKAEDVW ENSTTRP00000008876/1-914 LGGPGHVLIC ASDDRTCSQL RECIAVGAEA FLLRLYRKTF EKDSKAEDVW 451 500 ENSP00000310520/1-916 MKFRKEDSSK RIRKSHKRPK DPQNKERAST KERTLKKKKR KLTLTQMVGK ENSBTAP00000043645/1-916 MRLRKEDDSK RIMKSSKRPK DLRDKDRPPA KEKALRKKKP RLTLTQMMGR BACU012945/1-622 MRFRKEDGSK RIMKSNKRPK GLRNKDRASA KERALKKKKP RLTLTQMMEQ bmy_05415T0/1-862 MRFRKEDGSK RIMKSIKRPK GVRNKDRASA KERALKKKKP RLTLTQMMEQ ENSTTRP00000008876/1-914 MRFRKEDGSK GIMKSNRRPK GLRNKDRASA KERAVKKKKP RLTLTQMMEQ 501 550 ENSP00000310520/1-916 PEELEEEGDV EEGYRREISS SPESCPEEIK HEEFDVNLSS DAAFGILKEP ENSBTAP00000043645/1-916 TEELEGEAGV EEGSPRELTS SPESCTEDIK HEEFDMNVSS DAAYGILKDP BACU012945/1-622 SEELEEEGAV EEGCPRDVSS SPESCLEEIK HEEFDLNVSS DAAYGIMKDP bmy_05415T0/1-862 SEELEEEGAV EEGCPRDLSS SPESCLEEIK HEEFDLNVSS DAAYGIMKDP ENSTTRP00000008876/1-914 SEELEEEGGV EEGCPRDLSS SPESCLEEIK HEEFDLNVSS DAAYGIIKDP 551 600 ENSP00000310520/1-916 LTIIHPLLGC SDPYALTRVL HEVEPRYVVL YDAELTFVRQ LEIYRASRPG ENSBTAP00000043645/1-916 LTIIHPLLGC SDPYALTRVL HEVEPRYVVL YDAELTFVRQ LEIYRASRPG BACU012945/1-622 LTIIHPLLGC SDPYALTRVL HEVEPRYVVL YDAELTFVRQ LEIYRASRPG bmy_05415T0/1-862 LTIIHPLLGC SDPYALTRVL HEVEPRYVVL YDAELTFVRQ LEIYRAS--- ENSTTRP00000008876/1-914 LTIIHPLLGC SDPYALTRVL HEVEPRYVVL YDAELTFVRQ LEIYRASRPG 601 650 ENSP00000310520/1-916 KPLRVYFLIY GGSTEEQRYL TALRKEKEAF EKLIREKASM VVPEEREGRD ENSBTAP00000043645/1-916 KPLRVYFLIY GGSTEEQRYL TALRKEKEAF EKLIREKASM VIPEEREGRD BACU012945/1-622 KPLRQ----- ---------- ---------- ---------- ---------- bmy_05415T0/1-862 ---------- --STEEQRYL TALRKEKEAF EKLIREKASM VVPEEREGRD ENSTTRP00000008876/1-914 KPLRVYFLIY GGSTEEQRYL TALRKEKEAF EKLIREKASM VVPEEREGRD 651 700 ENSP00000310520/1-916 ETNLDLVRGT ASADVSTDTR KAGGQEQNGT QQSIVVDMRE FRSELPSLIH ENSBTAP00000043645/1-916 ETNLDLVRGC VSANATTDTR KAGGQEQNGT QQSIVVDMRE FRSELPSLIH BACU012945/1-622 ---------- ---------- ---------- ---------- ---------- bmy_05415T0/1-862 ETNLDLVRGC VSAGAPTDTR KAGGQEQNGT QQSIVVDVRE FRSELPSLIH ENSTTRP00000008876/1-914 ETNLDLVRGC VSAGAPTDTR KAGGQEQNGT QQSIVVDMRE FRSELPSLIH 701 750 ENSP00000310520/1-916 RRGIDIEPVT LEVGDYILTP EMCVERKSIS DLIGSLNNGR LYSQCISMSR ENSBTAP00000043645/1-916 RRGIDIEPVT LEVGDYILTP EMCVERKSIS DLIGSLNNGR LYSQCISMSR BACU012945/1-622 ---------- ---------- ---VVRNMNC DLMG------ ---------- bmy_05415T0/1-862 RRGIDIEPVT LEVGDYVLTP EMCVERKSIS DLIGSLNNGR LYSQCVSMSR ENSTTRP00000008876/1-914 RRGIDIEPVT LEVGDYVLTP EMCVERKSVS DLIGSLNNGR LYSQCISMSR 751 800 ENSP00000310520/1-916 YYKRPVLLIE FDPSKPFSLT SRGALFQEIS SNDISSKLTL LTLHFPRLRI ENSBTAP00000043645/1-916 YYKRPMLLIE FDPTKPFSLM SRGAFHQEIS GNDVSSKLTL LTLHFPRLRI BACU012945/1-622 ---------- FN-------- ---------- ---------- ----FTVL-- bmy_05415T0/1-862 YYKRPVLLIE FDPTKPFSLV SRGAFHQEIS GGDISSKLTL LTLHFPRLRV ENSTTRP00000008876/1-914 YYKRPVLLIE FDPTKPFSLM SRGAFHQEIS GNDISSKLTL LTLHFPRLRI 801 850 ENSP00000310520/1-916 LWCPSPHATA ELFEELKQSK PQPDAATALA ITADSETLPE SEKYNPGPQD ENSBTAP00000043645/1-916 LWCPSPHATA ELFEELKQNK PQPDATTAMA VSADSETLPE AEKYNPGPQD BACU012945/1-622 ---------- ---------- ---------- ---------- ---------- bmy_05415T0/1-862 LWCPSPHATA ELFEALKQNK PQPDAATAMA VTADSETLPE AEKYNPGPQD ENSTTRP00000008876/1-914 LWCPSPHATA ELFEGLKQNK PQPDAATAMA VTADSETLPE AEKYNPGPQD 851 900 ENSP00000310520/1-916 FLLKMPGVNA KNCRSLMHHV KNIAELAALS QDELTSILGN AANAKQLYDF ENSBTAP00000043645/1-916 FLLKMPGINA KNCRSLMNHV KNIAELASLP FDELASMLGN TASARQLYDF BACU012945/1-622 ---------- ---------- ---------- ---------- ---------- bmy_05415T0/1-862 FLLKMPGVNA KNCRSLMTNV KNIAELASLS LDKLVLLLGN VANARQLYDF ENSTTRP00000008876/1-914 FLLKMPGVNA KNCRSLMTNI KNIAELASLS LDKLVLLLGN AANARQLYDF 901 950 ENSP00000310520/1-916 IHTSFAEVVS KGKGKK ENSBTAP00000043645/1-916 IHTSYAEVLS RGKMKK BACU012945/1-622 ---------- ------ bmy_05415T0/1-862 IHTSYAEVIS KGKMEK ENSTTRP00000008876/1-914 IHTSYAEVIS KGKMEK