KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:01 2014 Check: 00 .. Name: ENSP00000355627/1-485 Len: 518 Check: 3799 Weight: 1.00 Name: ENSBTAP00000043654/1-424 Len: 518 Check: 4071 Weight: 1.00 Name: ENSTTRP00000003727/1-484 Len: 518 Check: 6460 Weight: 1.00 Name: bmy_17332T0/1-517 Len: 518 Check: 6705 Weight: 1.00 Name: BACU005027/1-477 Len: 518 Check: 1332 Weight: 1.00 // 1 50 ENSP00000355627/1-485 ---------- ---------- ---------- -MRKRAPQSE MAPAGVSLRA ENSBTAP00000043654/1-424 ---------- ---------- ---------- ---------- MAPAGLSLGA ENSTTRP00000003727/1-484 ---------- ---------- ---------- ---PQEAPSE MVPAGLSLGA bmy_17332T0/1-517 MDGFLLCRLV VGIIARGHSV ILFPPSQNIS GSAEASTPSE MAPAGLSLGA BACU005027/1-477 ---------- ---------- ---------- ---------- MAPAGLSLGA 51 100 ENSP00000355627/1-485 TILCLLAWAG LAAGDRVYIH PFHLVIHNES TCEQLAKANA GKPKDPTFIP ENSBTAP00000043654/1-424 AILCLLAWAG LAAGDRVYVH PFHLLVYSKS NCDQLEKPSV ETPPDPTFTP ENSTTRP00000003727/1-484 SVLCLLAWAR LAPADRVYIH PFHLLVYSKS SCDQLEKPRA ESPPDPTFTP bmy_17332T0/1-517 SVLCLLAWAR LATADRVYIH PFHLLVYSKS SCDQLEKPSA ESPPDPTFTP BACU005027/1-477 SVLCLLAWAL LATADRVYIH PFHLLVYSKS SCDQLEKPSA ASPPDPTFTP 101 150 ENSP00000355627/1-485 APIQAKTSPV DEKALQDQLV LVAAKLDTED KLRAAMVGML ANFLGFRIYG ENSBTAP00000043654/1-424 VPIQTKSSAV DEEALWEQLV RATEKLEAED RLRASEVGLL LNFMGFHMYK ENSTTRP00000003727/1-484 VPIQAKSSAV DEQALREQLV RATQQLEAEE RLRAVKVGVL LNFMGFHMYK bmy_17332T0/1-517 VPIQAKSSAV DEQALREQLV RATQKLEAED RLRAVNVGML LNFMGFHMYK BACU005027/1-477 VPIQAKSSAV DEQALREQLV RATRELEAED RLRAVNVGML LNFMGFHMYK 151 200 ENSP00000355627/1-485 MHSELWGVVH GATVLSPTAV FGTLASLYLG ALDHTADRLQ AILGVPWKDK ENSBTAP00000043654/1-424 TLSETWSVAS GA-VFSPVAL FSTLTSFYVG ALDPTASRLQ AFLGVPGEGQ ENSTTRP00000003727/1-484 MLSETRSAAS GA-VLSPVAL FGTLTSFYLG ALDPTASRLQ AFLGVPGEDQ bmy_17332T0/1-517 MLSETRSTAS GA-VLSPVAL FGTLTSFYLG ALDPTASRLQ AFLGVPGEDQ BACU005027/1-477 MLSETRSAAS GA-VLSPVAL FGTLTSFYLG ALDPTASRLQ AFLGVPGEDQ 201 250 ENSP00000355627/1-485 NCTSRLDAHK VLSALQAVQG LLVAQGRADS QAQLLLSTVV GVFTAPGLHL ENSBTAP00000043654/1-424 GCTSRLDGHK VLSSLQTIQG LLVAQGGASS QARLLLSTVV GLFTAPGLHL ENSTTRP00000003727/1-484 GCTSRLDGHK VLSALQTIQG LLVAQGGAGS RARLLLSTVV GLFTAPGLRL bmy_17332T0/1-517 GCTSRLDGHK VLSALQTIQG LLVAQGGAGS RXRLLLSTVV GLFTAPGLRL BACU005027/1-477 GCTSRLDGHK VLSALQTIQG LLVAQGGAGS RARLLLSTVV GLFMAPGLRL 251 300 ENSP00000355627/1-485 KQPFVQGLAL YTPVVLPRSL DF-TELDVAA EKIDRFMQAV TGWKTGCSLM ENSBTAP00000043654/1-424 KQPFVQSLSS FAPITLPRSL DLSTDPNLAA EKINRFMQSV TGWNMGRALT ENSTTRP00000003727/1-484 KQPFVQGLSS ISPVTLSRSL DLSTDPDLAA EKINRFMQAV TGWEMGRPLT bmy_17332T0/1-517 KQPFVQGLSS ITPVTLSRSL DLSTDPDLAA EKINRFMQAV TGWEMGRPLT BACU005027/1-477 KQPFVQGLSS ITPVTLSRSL DLSTDPDLAA EKINRFMQAV TGWEMGRPLT 301 350 ENSP00000355627/1-485 GASVDSTLAF NTYVHFQGKM KGFSLLAEPQ EFWVDNSTSV SVPMLSGMGT ENSBTAP00000043654/1-424 AVSPDSTLLF NAYVHFQGKM KGFSLLPGLK EFWVDNTTSV SVPMLSGTGI ENSTTRP00000003727/1-484 GVNPDSTLLF NTYVHFQGKM KGFSLLPGLQ EFRVDNTTSV SVPMLSGIGT bmy_17332T0/1-517 GVSPDSTLLF NAYVHFQGKM KGFSLLPGLQ EFWVDNTTSV SVPMLSSIGT BACU005027/1-477 GVSPDSTLLF NAYVHFQGKM KGFSLLPGLQ EFWVDNTTSV SVPMLSGIGT 351 400 ENSP00000355627/1-485 FQHWSDIQDN FSVTQVPFTE SACLLLIQPH YASDLDKVEG LTFQQNSLNW ENSBTAP00000043654/1-424 FHFWSDSQNN LSVTRVPLSA NTYLLLIQPH HTPDLRKVEA LTFQHNFLTR ENSTTRP00000003727/1-484 FHYWSDTQNH LSVTRVPLSA NACLLLIRPH HAPDLRQVEA LTFQYNFLSL bmy_17332T0/1-517 FHYWSDTQNN LSVTRVPLSA NACLLLIQPH RAPDLRQVEA VTFQHNFLTW BACU005027/1-477 FHYWSDTQNN LSVTRVPLSA NACLLLIQPH CAPDLRQVEA VTFQHTFLTW 401 450 ENSP00000355627/1-485 MKKLSPRTIH LTMPQLVLQG SYDLQDLLAQ AELPAILHTE LNLQKLSNDR ENSBTAP00000043654/1-424 MKNLSPR--- ---------- -YGSRKLLG- ---PSWAAPP PQ-------- ENSTTRP00000003727/1-484 MKNLSPRAIR LTMPQLTLKG SYDLQDLLAQ TKLPALLGAE ANLGKISDAN bmy_17332T0/1-517 MKNLSPRAIR LTVPQLTLKG SYDLQDLLAQ TKLPTLLGAE ANLGKISDAN BACU005027/1-477 MKNLSPRAIR LTVPQLTLKG SYDLQDLLAQ TKLPTLLGAE ANLGKISDAS 451 500 ENSP00000355627/1-485 IRVGEVLNSI FFELEADERE -PTESTQQLN KPEVLEVTLN RPFLFAVYDQ ENSBTAP00000043654/1-424 -RAGICVGS- -----SAQGV GARGWARAPC R-----LSLG RP-------- ENSTTRP00000003727/1-484 LRVGKVLNSV LFELKADEGE QPTESAPLPA GPEVLEVTLN SPFLLAVLER bmy_17332T0/1-517 LRVGKVLNSV LFELKADEGE QPTESAPQPA GPEVLEVTLN SPFLLAVLER BACU005027/1-477 LRVGKVLNSV LFELKADEGE QPTESAPQPA GPEVLEVTLN SPFLLAVLER 501 550 ENSP00000355627/1-485 SATALHFLGR VANPLSTA ENSBTAP00000043654/1-424 -AGG----GR AGGKGE-- ENSTTRP00000003727/1-484 DSAALHFLGR VSNPLSAA bmy_17332T0/1-517 DSAALHFLGR VSNPLSTA BACU005027/1-477 DSAALHFLGR VSNPLSAA