KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:02 2014 Check: 00 .. Name: BACU008005/1-258 Len: 297 Check: 1961 Weight: 1.00 Name: ENSP00000389277/1-295 Len: 297 Check: 7087 Weight: 1.00 Name: ENSBTAP00000043666/1-236 Len: 297 Check: 1038 Weight: 1.00 Name: ENSTTRP00000000941/1-236 Len: 297 Check: 1671 Weight: 1.00 Name: bmy_05772T0/1-265 Len: 297 Check: 6689 Weight: 1.00 // 1 50 BACU008005/1-258 ---------M RTCLKRNAGA GLPSRGGREV KSPER----- ---------- ENSP00000389277/1-295 MSHSSVTREA PQLLSQRQRR EVRGVWGWGC LPGPRGGPAL FGLVTFGQSG ENSBTAP00000043666/1-236 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000941/1-236 ---------- ---------- ---------- ---------- ---------- bmy_05772T0/1-265 ---------M KLLLLKLLCT FASRKFEWRL ---------- ---------- 51 100 BACU008005/1-258 -TLGESEAHP VIRRAVW--A PERRVRRTPS TQQHLKKVYA SFALCMFVAA ENSP00000389277/1-295 DCCTDSGTMN IFDRKINFDA LLKFSHITPS TQQHLKKVYA SFALCMFVAA ENSBTAP00000043666/1-236 --------MN IFDRKINFDA LFKFSHITPS TQQHLKKVYA SFALCMFVAA ENSTTRP00000000941/1-236 --------MN IFDRKINFDA LLKFSHITPS TQQHL-KLYA SFALCMFVAA bmy_05772T0/1-265 -CPTDSSIMN IFDRKINFDA LLKFSHITPS TQQHLKKVYA SFALCMFVAA 101 150 BACU008005/1-258 AGAYVHVVTH FIQDCRHAHA IDDQLL---- ----DESPLQ KSVLMLCSGA ENSP00000389277/1-295 AGAYVHMVTH FIQ-AGLLSA LGSLILMIWL MATPHSHETE QKRLGLLAG- ENSBTAP00000043666/1-236 AGAYIHVVTH FIQ-AGLLSA LGSLGLMIWL MATPHSHETE QKRLGLLAG- ENSTTRP00000000941/1-236 AGAYVHVVTH FIX-AGLLSA LGSLGLMIWL MATPHSHETE QKRLGLLAG- bmy_05772T0/1-265 AGAYVHVVTH FIQ-AGLLSA LGSLGLMIWL MATPHSHETE QKRLGLLAG- 151 200 BACU008005/1-258 FCFL-GVGLG PALDLCIAIN PSILPTAFLG TAMIFTCFTL SALYARRRSY ENSP00000389277/1-295 FAFLTGVGLG PALEFCIAVN PSILPTAFMG TAMIFTCFTL SALYARRRSY ENSBTAP00000043666/1-236 FAFLTGVGLG PALDLCIAIN PSILPTAFMG TAMIFTCFTL SALYARRRSY ENSTTRP00000000941/1-236 FAFLTGVGLG PALDLCIAIN PSILPTAFLG TAMIFTCFTL SALYARRRSY bmy_05772T0/1-265 FAFLTGVGLG PALDLCIAIN PSILPTAFLG TAMIFTCFTL SALYARRRSY 201 250 BACU008005/1-258 LFLGGILMSA MSLMLLSSLG NLFFGSIWLF QANLYVGLVV MCGFVLFDTQ ENSP00000389277/1-295 LFLGGILMSA LSLLLLSSLG NVFFGSIWLF QANLYVGLVV MCGFVLFDTQ ENSBTAP00000043666/1-236 LFLGGILMSA MSLMLLSSLG NLFFGSVWLF QANLYMGLVV MCGFVLFDTQ ENSTTRP00000000941/1-236 LFLGGVLMSA MSLMLLSSLG NLFFGSFWLF QANLYVGLVV MCGFVLFDTQ bmy_05772T0/1-265 LFLGGILMSA MSLMLLSSLG NLFFGSIWLF QANLYVGLVV MCGFVLFDTQ 251 300 BACU008005/1-258 LIIEKAESGD KDYIWHCVDL FLDFVTLFRK LMMILAMNEK VSTT--- ENSP00000389277/1-295 LIIEKAEHGD QDYIWHCIDL FLDFITVFRK LMMILAMNEK DKKKEKK ENSBTAP00000043666/1-236 LIIEKAENGD KDYIWHCVDL FLDFVTLFRK LMMILAMNEK DKKKKK- ENSTTRP00000000941/1-236 LIIEKAENGD KDYIWHCVDL FLDFVTLFRK LMMILAMNEK DKKKEKK bmy_05772T0/1-265 LIIEKAENGD KDYIWHCVDL FLDFVTLFRK LMMILAMNEK DKKKEKK