KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:05 2014 Check: 00 .. Name: ENSP00000319279/1-824 Len: 840 Check: 719 Weight: 1.00 Name: ENSTTRP00000007245/1-758 Len: 840 Check: 2184 Weight: 1.00 Name: bmy_07070T0/1-769 Len: 840 Check: 3656 Weight: 1.00 Name: BACU019340/1-759 Len: 840 Check: 6850 Weight: 1.00 Name: ENSBTAP00000043692/1-837 Len: 840 Check: 3515 Weight: 1.00 // 1 50 ENSP00000319279/1-824 ------MSLL GDPLQALPPS AAPTGPLLAP PAGATLNRLR EPLLRRLSEL ENSTTRP00000007245/1-758 ---------- ---------- ---------- ---------- ---------- bmy_07070T0/1-769 ---------- ---------- ---------- ---------- -----MRCNV BACU019340/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043692/1-837 LSLCGELLQA PPPLTSSPPT AAPSGPPLPA AAGATLNRLP EPLLRRLSGS 51 100 ENSP00000319279/1-824 LDQAPEGRGW RRLAELAGSR GRLRLSCLDL EQCSLKVLEP EGSP-SLCLL ENSTTRP00000007245/1-758 ---------- ---------- ------CLDL EQCCLKVLEP EGSP-SLCLL bmy_07070T0/1-769 HNRSVPGKAV NYFDSN---- ------CIML SENRLVCQEA VHSPFKIELA BACU019340/1-759 ---------- ---------- ------CLDL EQCSLKVLEP EGSP-SLCLL ENSBTAP00000043692/1-837 LDRAPEGRGW RRLAEVAGSR GRLRLSCLDL EQCSLKVLEP EGSP-SLCLL 101 150 ENSP00000319279/1-824 KLMGEKG--C TVTELSDFLQ AMEHTEVLQL LSPPGIKITV NPESKAVLAG ENSTTRP00000007245/1-758 KLLGEKG--C TVVELSDFLQ TMEHTEVLQL LNPPGIKITV NPESKAVLAG bmy_07070T0/1-769 SALVHRPELC AIFPPYFVQH VLTSGRCARV VR--GIKITV NPESKAVLAG BACU019340/1-759 KLLGEKG--C TVVELSDFLQ TMEHTEVLQL LSPPGIKITV NPESKAVLAG ENSBTAP00000043692/1-837 KLLAEKG--C TVMELSDFLQ AMEHTEVLQL LSPPGIKITV NPESKAVLAG 151 200 ENSP00000319279/1-824 QFVKLCCRAT GHPFVQYQWF KMNKEIPNGN TSELIFNAVH VKDAGFYVCR ENSTTRP00000007245/1-758 QFVKLCCRAT GHPFVQYQWF KMNKEIPNGN ASELIFNTVH IKDAGFYVCR bmy_07070T0/1-769 QFVKLCCRAT GHPFVQYQWF KMNKEIPNGN ASELIFNTVH IKDAGFYVCR BACU019340/1-759 QFVKLCCRAT GHPFVQYQWF KMNKEIPNGN ASELIFNTVH IKDAGFYVCR ENSBTAP00000043692/1-837 QFVKLCCRAT GHPFVQYQWF KMNKEIPNGN ASELVFNTVH VKDAGFYVCR 201 250 ENSP00000319279/1-824 VNNNFTFEFS QWSQLDVCDI ---PESFQRS VDGVSESKLQ ICVEPTSQKL ENSTTRP00000007245/1-758 VNNNFTFEFS QWSQLDVCDV TEVTEGFQRS LDGVSDSKLQ ICIEPKSQKL bmy_07070T0/1-769 VNNNFTFEFS QWSQLDVCDV TEVTESFQRS LDGVSDSKLQ ICIEPKSQKL BACU019340/1-759 VNNNFTFEFS QWSQLDVCDV TEVTESFQRS LDGVSDSKLQ ICIEPKSQKL ENSBTAP00000043692/1-837 VNNNFTFEFS QWSQLDVCDI TEVTESFQSS WDGISESKLQ ICVEPKSQKL 251 300 ENSP00000319279/1-824 MPGSTLVLQC VAVGSPIPHY QWFKNELPLT HETKKLYMVP YVDLEHQGTY ENSTTRP00000007245/1-758 MPGSTLILQC VAVGSPIPHY QWFRNESPLT HETKKLYMVP YVDLEHQGTY bmy_07070T0/1-769 MPGSTLILQC VAVGSPIPHY QWFKNESPLT HETKKLYMVP YVDLEHQGTY BACU019340/1-759 MPGSTLILQC VAVGSPIPHY QWFRNESPLT HETKKLYMVP YVDLEHQGTY ENSBTAP00000043692/1-837 MPGSTLILQC VAVGSPIPQY QWFKNESRLT HETKKLYMVP YVDLEHQGTY 301 350 ENSP00000319279/1-824 WCHVYNDRDS QDSKKVEIII --GRTDEAVE CTEDELNNLG HP-DNKEQTT ENSTTRP00000007245/1-758 WCRVYNDRDS QNSKKVEVIV --GRTDVAVE CTEDELNNLG HP-XXXXXXX bmy_07070T0/1-769 WCRVYNDRDS ZNSKKVEVIV ---------- ---DELNNLG HP-DNKEQTV BACU019340/1-759 WCRVYNDRDS QNSKKVEVIV --GRTDEAVE CTEDELNNLG HPGQPRFGAG ENSBTAP00000043692/1-837 WCRVYNDRES QDSKKVDVIV EQGRTDEAVE CTEDELTNLG HPVDNQEQTV 351 400 ENSP00000319279/1-824 DQPLAKDKVA LLIGNMNYRE HPKLKAPLVD VYELTNLLRQ LDFKVVSLLD ENSTTRP00000007245/1-758 XXXXXKDKVA LLIGNMNYWE HPKLKAPLVD VYELTNLLRQ LDFKVVSLLD bmy_07070T0/1-769 DQPLAKDKVA LLIGNMNYWE HPKLKAPLVD VYELTNLLRQ LDFKVVSLLD BACU019340/1-759 GRGQAKDKVA LLIGNMNYWE HPKLKAPLVD VYELTNLLRQ LDFKVVSLLD ENSBTAP00000043692/1-837 DQPLAKDKVA LLIGNMNYWE HPKLKAPLVD VYELTNLLRQ LDFKVVSLLD 401 450 ENSP00000319279/1-824 LTEYEMRNAV DEFLLLLDKG VYGLLYYAGH GYENFGNSFM VPVDAPNPYR ENSTTRP00000007245/1-758 LTEYEMRNAV DEFLLLLDKG VYGLLYYAGH GYENFGNSFM VPVDAPNPYR bmy_07070T0/1-769 LTEYEMRNAV DEFLLLLDKG VYGLLYYAGH GYENFGNSFM VPVDAPNPYR BACU019340/1-759 LTEYEMRNAV DEFLLLLDKG VYGLLYYAGH GYENFGNSFM VPVDAPNPYR ENSBTAP00000043692/1-837 LTEYEMRNAV DEFLLLLDKG VYGLLYYAGH GYENFGNSFM VPVDAPNPYR 451 500 ENSP00000319279/1-824 SENCLCVQNI LKLMQEKETG LNVFLLDMCR KRNDYDDTIP ILDALKVTAN ENSTTRP00000007245/1-758 SENCLCVQNI LKLMQEKETG LNVFLLDMCR KRNDYDDTIP ILDALKVTAN bmy_07070T0/1-769 SENCLCVQNI LKLMQEKETG LNVFLLDMCR KRNDYDDTIP ILDALKVTAN BACU019340/1-759 SENCLCVQNI LKLMQEKETG LNVFLLDMCR KRNDYDDTIP ILDALKVTAN ENSBTAP00000043692/1-837 SENCLCVQNI LKLMQEKETG LNVFLLDMCR KRNDYDDTIP ILDALRVTAN 501 550 ENSP00000319279/1-824 IVFGYATCQG AEAFEIQHSG LANGIFMKFL KDRLLEDKKI TVLLDEVAED ENSTTRP00000007245/1-758 IVFGYATCQG AEAFEIQHSG LANGIFMKFL KDRLLEEKKI TVLLDEVAED bmy_07070T0/1-769 IVFGYATCQG AEAFEIQHSG LANGIFMKFL KDRLLEEKKI TVLLDEVAED BACU019340/1-759 IVFGYATCQG AEAFEIQHSG LANGIFMKFL KDRLLEEKKI TVLLDEVAED ENSBTAP00000043692/1-837 IVFGYATCQG AEAFEIQHSG LANGIFMKFL KDRLLEEKKI TVLLDEVAED 551 600 ENSP00000319279/1-824 MGKCHLTKGK QALEIRSSLS EKRALTDPIQ GTEYSAESLV RNLQWAKAHE ENSTTRP00000007245/1-758 MGKCHLTKGK QALEIRSSLS EKRALTDPIQ GTAHSAESLV RNLQWAKAHE bmy_07070T0/1-769 MGKCHLTKGK QALEIRSSLS EKRALTDPIQ GTAHSAESLV RNLQWAKAHE BACU019340/1-759 MGKCHLTKGK QALEIRSSLS EKRALTDPIQ GTAHSAESLV RNLQWAKAHE ENSBTAP00000043692/1-837 MGKCHLTKGK QALEIRSSLS EKRALTDPIQ GAAHSAESLV RNLQWAKAHE 601 650 ENSP00000319279/1-824 LPESMCLKFD CGVQIQLGFA AEFSNVMIIY TSIVYKPPEI IMCDAYVTDF ENSTTRP00000007245/1-758 LPESMCLKFQ CGVQIQLGFA AEFSNVMIIY TSIVHKPPDI LMCDAYVTDF bmy_07070T0/1-769 LPESMCLKFQ CGVQIQLGFA AEFSNVMIIY TSIVHKPPDI LMCDAYVTDF BACU019340/1-759 LPESMCLKFQ CGVQIQLGFA AEFSNVMIIY TSIVHKPPDI LMCDAYVTDF ENSBTAP00000043692/1-837 LPESMCLKFQ CGVQIQLGFA AEFSNVMIIY TSIVHKPPDI LMCDAYVTDF 651 700 ENSP00000319279/1-824 PLDLDIDPKD ANKGTPEETG SYLVSKDLPK HCLYTRLSSL QKLKEHLVFT ENSTTRP00000007245/1-758 PLXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXEHLVFT bmy_07070T0/1-769 PLDLDIDPKD ANKGTPEETG SYLVSKDLPK HCLYTRLSSL QKLKEHLVFT BACU019340/1-759 PLDLDIDPKD ANKGTPEETG SYLVSKDLPK HCLYTRLSSL QKLKEHLVFT ENSBTAP00000043692/1-837 PLDLDIDPKD ANKGTPEETG SYLVSKELPK HCLYTRLSSL QKLKEHLVFT 701 750 ENSP00000319279/1-824 VCLSYQYSGL EDTVEDKQEV NVGKPLIAKL DMHRGLGRKT CFQTCLMSNG ENSTTRP00000007245/1-758 VCLSYQYSGL EDTVEEKQEV NVGKPLIAKL DIHRGSGRKT CFQTCVMCNS bmy_07070T0/1-769 VCLSYQYSGL EDTVEEKQEV NVGKPLIAKL DIHRGSGRKT CFQTCVMCNS BACU019340/1-759 VCLSYQYSGL EDTVEEKQEV NVGKPLIAKL DIHRGSGRKT CFQTCVMCNS ENSBTAP00000043692/1-837 VCLSYQYSGL EDTVEEKQEV NVGKPLIAKL DIHRGSGRKT CFQTCVMCNG 751 800 ENSP00000319279/1-824 PYQSSAATSG GAGHYHSLQD PFHGVYHSHP GNPSNVTPAD SCHCSRTPDA ENSTTRP00000007245/1-758 PYQSSTAVSV GAGHYRSSQD SFCGVYHSHL SNSSNAMPSD SCRCSRTADA bmy_07070T0/1-769 PYQSSTAVSV GAGHYRSSQD SFCGVYHSHL SNSSNVMPSD SCRCSRTADA BACU019340/1-759 PYQSSTAVSV GAGHYRSSQD SFCGVYHSHL SNSSNVMPSD SCRCSRTADA ENSBTAP00000043692/1-837 PYPSSAASAA GAARYRPPQD SFSGAYHSHL SNSSNVMPSD GCRCSRTADA 801 850 ENSP00000319279/1-824 FISS-FAHHA SCHFSRSNVP VETTDEIPFS FSDRLRISEK ENSTTRP00000007245/1-758 FISSHHTHHY SCQFGRSNVP VETTDEIPFG FSDGLRISEK bmy_07070T0/1-769 FISSHHTHHY SCQFGRSNVP VETTDEIPFS FSDGLRISEK BACU019340/1-759 FISSHHTHHY SCQFGRSNVP VETTDEIPFN FSDGLRISEK ENSBTAP00000043692/1-837 FVSSHHTHHY SCQFGRSNVP VETTDEIPFT FSDGLRISEK