KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:06 2014 Check: 00 .. Name: ENSP00000327197/1-755 Len: 1346 Check: 5902 Weight: 1.00 Name: ENSBTAP00000043696/1-754 Len: 1346 Check: 739 Weight: 1.00 Name: ENSTTRP00000013181/1-753 Len: 1346 Check: 675 Weight: 1.00 Name: bmy_02303T0/1-754 Len: 1346 Check: 3230 Weight: 1.00 Name: BACU003802/1-1319 Len: 1346 Check: 5840 Weight: 1.00 // 1 50 ENSP00000327197/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043696/1-754 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013181/1-753 ---------- ---------- ---------- ---------- ---------- bmy_02303T0/1-754 ---------- ---------- ---------- ---------- ---------- BACU003802/1-1319 MSDNGELEDK PPAPPVRMSS TIFSTGGKDP LSANHSLKPL PSVPEEKKPR 51 100 ENSP00000327197/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043696/1-754 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013181/1-753 ---------- ---------- ---------- ---------- ---------- bmy_02303T0/1-754 ---------- ---------- ---------- ---------- ---------- BACU003802/1-1319 NKIISIFSST EKGSKKKEKE RPEISPPSDF EHTIHVGFDA VTGEFTGMPE 101 150 ENSP00000327197/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043696/1-754 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013181/1-753 ---------- ---------- ---------- ---------- ---------- bmy_02303T0/1-754 ---------- ---------- ---------- ---------- ---------- BACU003802/1-1319 QWARLLQTSN ITKLEQKKNP QAVLDVLKFY DSNTVKQKYL SFTPPEKDGF 151 200 ENSP00000327197/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043696/1-754 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013181/1-753 ---------- ---------- ---------- ---------- ---------- bmy_02303T0/1-754 ---------- ---------- ---------- ---------- ---------- BACU003802/1-1319 PSGTPALNTK GSETAVVTEE DDDDEETPPP VIAPRPDHTK SIYTRSVIDP 201 250 ENSP00000327197/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043696/1-754 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013181/1-753 ---------- ---------- ---------- ---------- ---------- bmy_02303T0/1-754 ---------- ---------- ---------- ---------- ---------- BACU003802/1-1319 IPAPVGDSNV DSGAKTSDKQ KKKAKMTDEE IMEKLRTIVS IGDPKKKYTR 251 300 ENSP00000327197/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043696/1-754 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013181/1-753 ---------- ---------- ---------- ---------- ---------- bmy_02303T0/1-754 ---------- ---------- ---------- ---------- ---------- BACU003802/1-1319 YEKIGQGASG TVFTATDVAL GQEVAIKQIN LQKQPKKELI INEILVMKEL 301 350 ENSP00000327197/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043696/1-754 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013181/1-753 ---------- ---------- ---------- ---------- ---------- bmy_02303T0/1-754 ---------- ---------- ---------- ---------- ---------- BACU003802/1-1319 KNPNIVNFLD SYLVGDELFV VMEYLAGGSL TDVVTETCMD EAQIAAVCRE 351 400 ENSP00000327197/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043696/1-754 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013181/1-753 ---------- ---------- ---------- ---------- ---------- bmy_02303T0/1-754 ---------- ---------- ---------- ---------- ---------- BACU003802/1-1319 CLQALEFLHA NQVIHRDIKS DNVLLGMEGS VKLTDFGFCA QITPEQSKRS 401 450 ENSP00000327197/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043696/1-754 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013181/1-753 ---------- ---------- ---------- ---------- ---------- bmy_02303T0/1-754 ---------- ---------- ---------- ---------- ---------- BACU003802/1-1319 TMVGTPYWMA PEVVTRKAYG PKVDIWSLGI MAIEMVEGEP PYLNENPLRA 451 500 ENSP00000327197/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043696/1-754 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013181/1-753 ---------- ---------- ---------- ---------- ---------- bmy_02303T0/1-754 ---------- ---------- ---------- ---------- ---------- BACU003802/1-1319 LYLIATNGTP ELQNPEKLSP IFQDFLNRCL EMDVEKRGSA RELLQHPFLK 501 550 ENSP00000327197/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043696/1-754 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013181/1-753 ---------- ---------- ---------- ---------- ---------- bmy_02303T0/1-754 ---------- ---------- ---------- ---------- ---------- BACU003802/1-1319 LAKPLSSLTP LIMAAKEAMK SSGFLPGRCC AFPGAGKELL LRDQCPLFLA 551 600 ENSP00000327197/1-755 ---------- ---------- ---------- ---------- -MKKQRKILW ENSBTAP00000043696/1-754 ---------- ---------- ---------- ---------- -MKKQRKILW ENSTTRP00000013181/1-753 ---------- ---------- ---------- ---------- -MKKQRKILW bmy_02303T0/1-754 ---------- ---------- ---------- ---------- -MKKQRKILW BACU003802/1-1319 SPSCTTQKRR GLAPPAAAPE AGGIFERKSC WCIQISLCIR KMKKQRKILW 601 650 ENSP00000327197/1-755 RKGIHLAFSE KWNTGFGGFK KFYFHQHLCI LKAKLGRPVT WNRQLRHFQG ENSBTAP00000043696/1-754 RKGIHLAFSE KWNTGFGGFK KFYFHQHLCI LKAKLGRPVT WSRHLRQFQC ENSTTRP00000013181/1-753 RKGIHLAFSE KWNTGFGGFK KFYFHQQLCI LKAKLGRPVT WSRHLRHFQC bmy_02303T0/1-754 RKGIHLAFSE KWNTGFGGFK KFYFHQQLCI LKAKLGRPVT WSRHLRHFQC BACU003802/1-1319 RKGIHLAFSE KWNTGFGGFK KFYFHQQLCI LKAKLGRPVT WSRHLRHLQC 651 700 ENSP00000327197/1-755 RKKALQIQKT WIKDEPLCAK TKFNVATQNV STLSSKVKRK DAKHFISSSK ENSBTAP00000043696/1-754 RKKGLQIQKT WIQDEPLFAK TKGNVAIQNL CTSASKVKRK DTKHFISSSR ENSTTRP00000013181/1-753 RKKALQFQKT WIQDEPLFAK AKSNVAVQNL STLSSKVKGK DTKHFISSSR bmy_02303T0/1-754 RKKALQIQKT WIQDEPLFAK TKSNVAVQNL STLSSKVKGK DTKHFISSSR BACU003802/1-1319 RKKALQIQKT WIQDEPLFAK TKSNVAVQNL STLSSKVKGK DTKHVISSSR 701 750 ENSP00000327197/1-755 TLLRLQAEKL LSSAKNSDHE YCREKNLLKA VTDFPSNSAL GQANGHRPRT ENSBTAP00000043696/1-754 TFLKLQAEKL LSSAKNSDHE YSGEKSLLKA AADLPVNSVL GQANGHRPRT ENSTTRP00000013181/1-753 TFLKLQAEKL LSSAKNSDHE YSGEKSLLKA ATDIPANSVL SQASGHRPRT bmy_02303T0/1-754 TFLKLQAEKL LSSAKNSDHE YSGEKSLLKA ATDIPANSVL SQASGHRPRT BACU003802/1-1319 TFLKLQAEKL LSSAKNSDHE YSGEKSLLKA ATDIPANSVS SQASGHRPRT 751 800 ENSP00000327197/1-755 DPQPSDFPMK FNGESQSPGE SGTIVVTLNN HKRKGFCYGC CQGPEHHRNG ENSBTAP00000043696/1-754 EPQASDFPMK FNGESQNPGE SDRIVVTLSN HKRKRFCYGC YPGLEHHRNG ENSTTRP00000013181/1-753 EPQASDPPMK FNGESQSPGE SGTIVVTLSN HKRKRFCYGC CRGLEHHRNG bmy_02303T0/1-754 EPQASDPPMK FNGESQSPGE SGTIVVTLSN HKRKRFCYGC YRGLEHHRNG BACU003802/1-1319 EPQASDPPMK FNGESQSPGE SGTIVVTLSN HKRKRFCYGC SRGLEHHRNG 801 850 ENSP00000327197/1-755 GPLIPKKFQL NQHRRIKLSP LMMYEKLSMI RFRYRILRSQ HFRTKSKVCK ENSBTAP00000043696/1-754 GPLIPKKFQL NQHRRIKVSP HMMYEKLPMI RFRYRILRSQ HFRTKSKVCK ENSTTRP00000013181/1-753 GPLIPRKFQL NQHRRIKVSP HMMYEKLSMI RFRYRILRSQ HFRTKSKVCK bmy_02303T0/1-754 GPLIPRKFQL NQHRRIKVSP HMMYEKLSMI RFRYRILRSQ HFRTKSKVCK BACU003802/1-1319 GPLIPRKFQL NQHRRIKVSP HMMYEKLSMI RFRYRILRSQ HFRTKSKVCK 851 900 ENSP00000327197/1-755 LRKAQRSWVQ KVTGDHQETR RENGEGGSCS PFPSPEPKDP SCRHQPYFPD ENSBTAP00000043696/1-754 LKKARQSWVQ -VTGDHQETL GENGEGGSCS PFPSPEPKDP SCQHPPHFPD ENSTTRP00000013181/1-753 LKKAQRSWVQ -VTGDHQETL RENSEGGSCS LFPSPEPKDP SCRHQPYLPD bmy_02303T0/1-754 LKKAQRSWVQ -VTGDHQETL RENSEGGSCS SFPSPEPKDP SCRHQPYLPD BACU003802/1-1319 LKKAQQSWVQ -VTGDHQETL RENSEGGSCS SFPSPEPKDP SCRHQPYLPD 901 950 ENSP00000327197/1-755 MDSSAVVKGT NSHVPDCHTK GSSFLGKELS LDEAFPDQQN GSATNAWDQS ENSBTAP00000043696/1-754 MDSDAVVKGK NSHVPEGHTK GSPLLDKELS LDGAFPDQQN GSATYTWDQS ENSTTRP00000013181/1-753 MDSNAVVKGE NSHVPDGHTK GSPLLGKELS LDEAFPDQQN GSATYIWDQS bmy_02303T0/1-754 MDSSAVVKGK NSHVPDGHTK GSPLLGKELS LDEAFPDQQN GSATYIWDQS BACU003802/1-1319 MDSNAVVKGK NSHVPDGHTK GSPLLGKELS LDEAFPDQQN GSATYIWDQS 951 1000 ENSP00000327197/1-755 SCSSPKWECT ELIHDIPLPE HRSNTMFISE TEREIMTLGQ ENQTSSVSDD ENSBTAP00000043696/1-754 PCSSPKWEYT ELIHDIPLPE HHSSNMFILE TEREVTALGQ ENRTSTVSDD ENSTTRP00000013181/1-753 PCSSPKWECT ELIHDIPLPE HHSNNMFISE TEGEVMALGQ ENRTSTVNDD bmy_02303T0/1-754 PCSSPKWECT ELIHDIPLPE HHSNNMFISE TEREVMALGQ ENRTSTVNDD BACU003802/1-1319 PCSSPKWECT ELIHDIPLPE HHSNNMFILE TEREVMALGQ ENRTSTVNDD 1001 1050 ENSP00000327197/1-755 RVKLSVSGAD TSVSSVDGPV SQKAVQNENS YQMEEDGSLK QSILSSELLD ENSBTAP00000043696/1-754 QVKLSVSGAD QSVRSVDGPV SEETVQNESS CQMDEDGSFK QNILSSKLLD ENSTTRP00000013181/1-753 RVKLSVSGAD QSVSSVDGPV SEETVQNESS CQMDEDGSFK QNILSSKLLD bmy_02303T0/1-754 RVKLSVSGAD QSVSSVDGPV SEETVQNESS CQMDEDGSFK QNILSSKLLD BACU003802/1-1319 RVKLSVSGAD QSVSSVDGPV SEETVQNESS CQMDEDGSFK QNILSSKLLD 1051 1100 ENSP00000327197/1-755 HPYCKSPLEA PLVCSGLKLE NQVGGGKNSQ KASPVDDEQL SVCLSGFLDE ENSBTAP00000043696/1-754 HPYCKSPLEA PLMCSGLKLE NQVGGGKNSQ KTSPVDDEQL SVCLSGFLDE ENSTTRP00000013181/1-753 HPYCKSPLEA PLTCSGLKLE NQVGGGKNSQ KASPVDDEQL SICLSGFLDE bmy_02303T0/1-754 HPYCKSPLEA PLTCSGLKLE NQVGGGKNSQ KASPVDDEQL SICLSGFLDE BACU003802/1-1319 HAYCKSPLEA PLTCSGLKLE NQVGGGKNSQ KASPVDDEQL SICLSGFLDE 1101 1150 ENSP00000327197/1-755 VMKKYGSLVP LSEKEVLGRL KDVFNEDFSN RKPFINREIT NYRARHQKCN ENSBTAP00000043696/1-754 VMKKYGSLVP LSEKDVLGRL KDVFNEDFSN RKPFINREIT NYRARHQKCN ENSTTRP00000013181/1-753 VMKKYGSLVP LSEKDVLGRL KDVFNEDFSN RKPFINREIT NYRARHQKCN bmy_02303T0/1-754 VMKKYGSLVP LSEKDVLGRL KDVFNEDFSN RKPFINREIT NYRARHQKCN BACU003802/1-1319 VMKKYGSLVP LSEKDVLGRL KDVFNEDFSN RKPFINREIT NYRARHQKCN 1151 1200 ENSP00000327197/1-755 FRIFYNKHML DMDDLATLDG QNWLNDQVIN MYGELIMDAV PDKVHFFNSF ENSBTAP00000043696/1-754 FRIFYNKHML DMDDLATLDG QNWLNDQVIN MYGELIMDAV PDKVHFFNSF ENSTTRP00000013181/1-753 FRIFYNKHML DMDDLATLDG QNWLNDQVIN MYGELIMDAV PDKXXXXXXX bmy_02303T0/1-754 FRIFYNKHML DMDDLATLDG QNWLNDQVIN MYGELIMDAV PDKVHFFNSF BACU003802/1-1319 FRIFYNKHML DMDDLATLDG QNWLNDQVIN MYGELIMDAV PD-------- 1201 1250 ENSP00000327197/1-755 FHRQLVTKGY NGVKRWTKKV DLFKKSLLLI PIHLEVHWSL ITVTLSNRII ENSBTAP00000043696/1-754 FHRQLVTKGY NGVKRWTKKV DLFKKSLLLI PIHLEVHWSL ITVTLSNRII ENSTTRP00000013181/1-753 XXXXXXXXXX XXXXXXXXXV DLFKKSLLLI PIHLEVHWSL ITVTLSNRII bmy_02303T0/1-754 FHRQLVTKGY NGVKRWTKKV DLFKKSLLLI PIHLEVHWSL ITVTLSNRII BACU003802/1-1319 ---------- --------KV DLFKKSLLLI PIHLEVHWSL ITVTLSNRII 1251 1300 ENSP00000327197/1-755 SFYDSQGIHF KFCVENIRKY LLTEAREKNR PEFLQGWQTA VTKCIPQQKN ENSBTAP00000043696/1-754 SFYDSQGIHF KFCVENIRKY LLTEAREKNR PEFLQGWQTA VTKCIPQQKN ENSTTRP00000013181/1-753 SFYDSQGIHF KFCVENI-KY LLTEAREKNR REFLQGWQTA VIKCIPQQKN bmy_02303T0/1-754 SFYDSQGIHF KFCVENIRKY LLTEAREKNR PEFLQGWQTA VTKCIPQQKN BACU003802/1-1319 SFYDSQGIHF KFCVENIRKY LLTEAREKNR PEFLQGWQTA VTKCIPQQKN 1301 1350 ENSP00000327197/1-755 DSDCGVFVLQ YCKCLALEQP FQFSQEDMPR VRKRIYKELC ECRLMD ENSBTAP00000043696/1-754 DSDCGVFVLQ YCKCLALEQP FQFSQEDMPR VRKRIYKELC ECRLMD ENSTTRP00000013181/1-753 DSDCGVFVLQ YCKCLALEQP FQFSQEDMPR VRKRIYKELC ECRLMD bmy_02303T0/1-754 DSDCGVFVLQ YCKCLALEQP FQFSQEDMPR VRKRIYKELC ECRLMD BACU003802/1-1319 DSDCGVFVLQ YCKCLALEQP FQFSQEDMPR VRKRIYKELC ECRLMD