KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:07 2014 Check: 00 .. Name: ENSP00000353224/1-760 Len: 771 Check: 6928 Weight: 1.00 Name: ENSBTAP00000043726/1-748 Len: 771 Check: 394 Weight: 1.00 Name: ENSTTRP00000012025/1-770 Len: 771 Check: 9872 Weight: 1.00 Name: bmy_02318T0/1-768 Len: 771 Check: 6599 Weight: 1.00 Name: BACU003816/1-771 Len: 771 Check: 4007 Weight: 1.00 // 1 50 ENSP00000353224/1-760 MMDQARSAFS NLFGGEPLSY TRFSLARQVD GDNSHVEMKL AVDEEENADN ENSBTAP00000043726/1-748 MMDQARSAFS NLFGGEPLSY TRFSLARQVD GDNSHVEMKL AADEEENVDS ENSTTRP00000012025/1-770 MMDQARSAFS NLFGGEPLSY TRFSLARQVD GDNSHVEMKL AVDEEENVDN bmy_02318T0/1-768 MMDQARSAFS NLFGGEPLSY TRFSLARQVD GDNSHVEMKL AVDEEENVDX BACU003816/1-771 MMDQARSAFS NLFGGEPLSY TRFSLARQVD GDNSHVEMKL AVDEEENVDN 51 100 ENSP00000353224/1-760 NTKAN---VT KPKRCSGSIC YGTIAVIVFF LIGFMIGYLG YCKGVEPKTE ENSBTAP00000043726/1-748 NMRGNQTSIA KPKRLNGYVC YGIIAVIVFF LIGFMIGYV- ------PRGD ENSTTRP00000012025/1-770 NMRGNHTNVT KPKRLNGYIC YGTIAVIVFF LIGFMIGYLG YCKRVEPKAD bmy_02318T0/1-768 NMRGNHTSVT KPKRLNGYIC YGTIAVIVFF LIGFMIGYLG YCKRVEPKAD BACU003816/1-771 NMRGNHTSVT KPKRLNGYLC YGTIAVIVFF LIGFMIGYLG YCKRVEPKAD 101 150 ENSP00000353224/1-760 CERLAGTESP VRE-----EP GEDFPAARRL YWDDLKRKLS EKLDSTDFTG ENSBTAP00000043726/1-748 ---------- -----RTFES EEQLPGVPRI FWADLKSTLS GKLDAVDFAR ENSTTRP00000012025/1-770 CERPAGREPS CTEETETFET EEQLPETRRI FWADLKSTLS KRLDAIDFTS bmy_02318T0/1-768 CERPAETGPS CTEETEPFET EEQLPETRRI FWADLKSMLS ERLDAIDFTS BACU003816/1-771 CERPAGTGPS CTEETEPFET EEQLPETRRI FWADLKSMLS ERLDAIDFTS 151 200 ENSP00000353224/1-760 TIKLLNENSY VPREAGSQKD ENLALYVENQ FREFKLSKVW RDQHFVKIQV ENSBTAP00000043726/1-748 AIKMLNENSY VPREAGSEKD TSLAFFIENQ LQDCKLGKVW HDEHFIKIQV ENSTTRP00000012025/1-770 AIKMLNGNSY VPREAGSQKD ESLAFYIENQ FRELKLSKAW HDEHFVKIQV bmy_02318T0/1-768 AIKMLNENSY VPREAGSQKD ESLAFYIENQ FRELKLSKVW HDEHYVKIQV BACU003816/1-771 VIKMLNENSY VPREAGSQKD ESLAFYIENQ FRELKLSKVW HDEHYVKIQV 201 250 ENSP00000353224/1-760 KDS-AQNSVI IVDKNG--RL VYLVENPGGY VAYSKAATVT GKLVHANFGT ENSBTAP00000043726/1-748 KGS-SQNSVS IVSTSGNGSQ AYPVESPEGY VAYSKAATVT GKLVHANFGT ENSTTRP00000012025/1-770 KGS-AHNSVT IVSESGSSST VYLVENPEGY VAYSKATTVT GKLVHANFGT bmy_02318T0/1-768 KGS---NSVT IVSKSGGSSM AYQVENPEGY VAYSKATTVT GKLVHANFGT BACU003816/1-771 KGSNAQNSVT IVSKSGGSSM AYQVENPEGY VAYSKATTVT GKLVHANFGT 251 300 ENSP00000353224/1-760 KKDFEDLYTP VNGSIVIVRA GKITFAEKVA NAESLNAIGV LIYMDQTKFP ENSBTAP00000043726/1-748 KQDFEDLNMP VNGSLVIVRA GKISFAEKVA NAESLNAIGV LIYMDYSKYP ENSTTRP00000012025/1-770 KKDFEDLNMP VNGSLVIVRA GKITFAEKAA NAESLNAIGV LIYMDQTKFP bmy_02318T0/1-768 KKDFEDLNMP VNGSLVIVRA GKITFAEKVA NAESLNAIGV LIYMDQTKFP BACU003816/1-771 KKDFEDLNMP VNGSLVIVRA GKITFAEKVA NAESLNAIGV LIYMDQTKFP 301 350 ENSP00000353224/1-760 IVNAELSFFG HAHLGTGDPY TPGFPSFNHT QFPPSRSSGL PNIPVQTISR ENSBTAP00000043726/1-748 IVNANLPVFG HAHLGTGDPY TPGFPSFNHT QFPPSQSSGL PNIPVQTITR ENSTTRP00000012025/1-770 IVNADLPVFG HAHLGTGDPY TPGFPSFNHT QFPPSQSSGL PNIPVQTISR bmy_02318T0/1-768 IVNADLPVFG HAHLGTGDPY TPGFPSFNHT QFPPSQSSGL PNIPVQTISR BACU003816/1-771 IVNADLPVFG HAHLGTGDPY TPGFPSFNHT QFPPSQSSGL PNIPVQTISR 351 400 ENSP00000353224/1-760 AAAEKLFGNM EGDCPSDWKT DSTCRMVTSE SKNVKLTVSN VLKEIKILNI ENSBTAP00000043726/1-748 AGAEKLFQNM EGDCPRIWGT DSSCKLVSSQ DKNVKLSVNN VLKEIRILNV ENSTTRP00000012025/1-770 AGAEKLFRNM EGDCPPIWGL DSSCKLVSSQ NKNVKLTVNN VLKEIRIFNI bmy_02318T0/1-768 AGAEKLFQNM EGDCPSIWGI DSSCKLVSSQ NKNVKLAVNN VLKEIRIFNI BACU003816/1-771 AGAEKLFQNM EGDCPSIWGI DSSCKLVSSQ NKNVKLTVNN VLKEIRIFNI 401 450 ENSP00000353224/1-760 FGVIKGFVEP DHYVVVGAQR DAWGPGAAKS GVGTALLLKL AQMFSDMVLK ENSBTAP00000043726/1-748 FGVIKGFEEP DRYVIVGAQR DAWGPGAAKS SVGTSLLLTL ARILSDMVLK ENSTTRP00000012025/1-770 FGVIKGFEEP DRYVIVGAQR DAWGPGAAKS SVGTSLLLKL AQILSDMVLK bmy_02318T0/1-768 FGVIKGFEEP DRYVIVGAQR DAWGPGAAKS SVGTSLLLKL AQILSDMVLK BACU003816/1-771 FGVIKGFEEP DRYVIVGAQR DAWGPGAAKS SVGTSLLLKL AQILSDMVLK 451 500 ENSP00000353224/1-760 DGFQPSRSII FASWSAGDFG SVGATEWLEG YLSSLHLKAF TYINLDKAVL ENSBTAP00000043726/1-748 GQFKPSRSIV FASWSGGDFG AVGATEWLEG YLSSLHLKAF TYINLDKAVV ENSTTRP00000012025/1-770 GQFKPSRSIV FASWSGGDFG AIGATEWLEG YLASLHLKAF TYINLDKAVL bmy_02318T0/1-768 GQFKPSRSIV FASWSGGDFG AIGATEWLEG YLASLHLKAF TYINLDKAVL BACU003816/1-771 GQFKPSRSIV FASWSGGDFG AIGATEWLEG YLASLHLKAF TYINLDKAIL 501 550 ENSP00000353224/1-760 GTSNFKVSAS PLLYTLIEKT MQNVKHPVTG QFLYQDSNWA SKVEKLTLDN ENSBTAP00000043726/1-748 GTTNFKVSAS PLLYSLIEKI MKDVKHPLNG LSLYRDSNWI SKVQKLSLDN ENSTTRP00000012025/1-770 GTSKFKVSSS PLLYSLIEKT MQDVKHPVTG LSLYRDSNWI NKVEKLSFDN bmy_02318T0/1-768 GTSKFKVSSS PLLYSLIEKT MQDVKHPVTG LSLYRDSNWI NKVEKLSFDN BACU003816/1-771 GTSKFKVSSS PLLYSLIEKT MQDVKHPVTG LSLYRDSNWI NKVEKLSFDN 551 600 ENSP00000353224/1-760 AAFPFLAYSG IPAVSFCFCE DTDYPYLGTT MDTYKELIER IPELNKVARA ENSBTAP00000043726/1-748 AAFPFLAYSG IPAVSFCFCE DTDYPYLGTP MDTYETLNRE VPQLNRVARA ENSTTRP00000012025/1-770 AAFPFLAYSG IPAVSFCFCE DTDYPYLGTP MDTYEVLNQN VPQLNKMARA bmy_02318T0/1-768 AAFPFLAYSG IPAVSFCFCE DTDYPYLGTS MDTYEVLNQN VPQLNKMARA BACU003816/1-771 AAFPFLAYSG IPAVSFCFCE DTDYPYLGTP MDTYEVLNQN VPQLNKMARA 601 650 ENSP00000353224/1-760 AAEVAGQFVI KLTHDVELNL DYERYNSQLL SFVRDLNQYR ADIKEMGLSL ENSBTAP00000043726/1-748 AAEVAGQLVI KLTHGVELNL NYEMYNDEIL RFVKEMNLFR ADIRDMGLNM ENSTTRP00000012025/1-770 AAEVAGLLVI KLTHDVELNL NYEMYNDKIL WFVREMNQFR ADIKEMGLNL bmy_02318T0/1-768 AAEVAGLLVI KLTHDVELNL NYEMYNDKIL WFVREMNQFR ADIKEMGLNL BACU003816/1-771 AAEVAGLLVI KLTHDVELNL NYEMYNDKIL WFVREMNQFR ADIKEMGLNL 651 700 ENSP00000353224/1-760 QWLYSARGDF FRATSRLTTD FGNAEKTDRF VMKKLNDRVM RVEYHFLSPY ENSBTAP00000043726/1-748 QWLYSARGDF FRATSRLTTD YKNAEKTDRS VMREINDRIM KVEYHLLSPY ENSTTRP00000012025/1-770 QWLYSARGDF FRATSRLTTD YKNAERTNRF VMREINDRIM KVEYHFLSPY bmy_02318T0/1-768 QWLYSARGDF FRATSRLTTD YKNAERTNRF VMREINDRIM KVEYHFLSPY BACU003816/1-771 QWLYSARGDF FRATSRLTTD YKNAERTNRF VMREINDRIM KVEYHFLSPY 701 750 ENSP00000353224/1-760 VSPKESPFRH VFWGSGSHTL PALLENLKLR KQNNGAFNET LFRNQLALAT ENSBTAP00000043726/1-748 VSPREFPFRH IFWGSGSHTL SALLEHLKLR KKNNGAFNQT LLENQLALAT ENSTTRP00000012025/1-770 VSPRESPFRH IFWGSGSHTL SALLEHLKLR QKNNGAFNET LLKNQLALAT bmy_02318T0/1-768 VSPRESPFRH IFWGSGSHTL SALLEHLKLR QKNNGAFNQT LLENQLALAT BACU003816/1-771 VSPRESPFRH IFWGSGSHTL SALLEHLKLR QKNNGAFNQT LLKNQLALAT 751 800 ENSP00000353224/1-760 WTIQGAANAL SGDVWDIDNE F ENSBTAP00000043726/1-748 WTIQGAANAL SGDIWDIDNE F ENSTTRP00000012025/1-770 WTIQGAANAL SGDIWDIDNE F bmy_02318T0/1-768 WTIQGAANAL SGDIWDIDNE F BACU003816/1-771 WTIQGAANAL SGDIWDIDNE F