KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:17 2014 Check: 00 .. Name: ENSP00000379691/1-788 Len: 804 Check: 4224 Weight: 1.00 Name: ENSBTAP00000043763/1-787 Len: 804 Check: 1235 Weight: 1.00 Name: ENSTTRP00000009700/1-784 Len: 804 Check: 2783 Weight: 1.00 Name: bmy_05428T0/1-786 Len: 804 Check: 426 Weight: 1.00 Name: BACU012936/1-801 Len: 804 Check: 9143 Weight: 1.00 // 1 50 ENSP00000379691/1-788 ---------- -----MDASL EK-IADPTLA EMGKNLKEAV KMLEDSQRRT ENSBTAP00000043763/1-787 ---------- -----MDASL EKKIADPTLA EMGKNLKEAM KMLEDSQRRT ENSTTRP00000009700/1-784 ---------- -----LKCI- -R-IADPTLA EMGKNLKEAM KMLEDSQRRT bmy_05428T0/1-786 ---------- -----MDAPL EK-IADPTLA EMGKNLKEAM KMLEDSQRRT BACU012936/1-801 MIMGNRAISR SLITSARTLS HK-ITDPTLA EMGKNLKEAM KMLEDSQRRT 51 100 ENSP00000379691/1-788 EEENGKKLIS GDIPGPLQGS GQDMVSILQL VQNLMHGDED EEPQSPRIQN ENSBTAP00000043763/1-787 EEENGKKLLS GDIPGPLQGS GQDMVSILQL VQNLMHGDED EQPQSTRIQN ENSTTRP00000009700/1-784 EEENGKKLLS GDIPGPLQGS GQDMVSILQL VQNLMHGDED EEPQSTRIQN bmy_05428T0/1-786 EEENGKKLLS GDIPGPLQGS GQDMVSILQL VQNLMHGDED EEPQSTRIQN BACU012936/1-801 EEENGKKLLS GDIPGPLQGS GQDMVSILQL VQNLMHGDED EEPQSTRIQN 101 150 ENSP00000379691/1-788 IGEQGHMALL GHSLGAYIST LDKEKLRKLT TRILSDTTLW LCRIFRYENG ENSBTAP00000043763/1-787 IGEQGHISLL GHSLGAYIST LDKEKLRKLT TRILSDTTLW LCRIFRYENG ENSTTRP00000009700/1-784 IGEQGHIALL GHSLGAYIST LDKEKLRKLT TRILSDTTLW LCRIFRYENG bmy_05428T0/1-786 IGEQGHIALL GHSLGAYIST LDKEKLRKLT TRILSDTTLW LCRIFRYENG BACU012936/1-801 IGEQGHIALL GHSLGAYIST LDKEKLRKLT TRILSDTTLW LCRIFRYENG 151 200 ENSP00000379691/1-788 CAYFHEEERE GLAKICRLAI HSRYEDFVVD GFNVLYNKKP VIYLSAAARP ENSBTAP00000043763/1-787 CAYFHEEERE GLAKICRLAI HSRYEDFVVD GFNVLYNRKP VLYLSAAARP ENSTTRP00000009700/1-784 CAYFHEEERE GLAKICRLAI HSRYEDFVVD GFNVLYNKTP VIYLSAAARP bmy_05428T0/1-786 CAYFHEEERE GLAKICRLAI HSRYEDFVVD GFNVLYNKTP VIYLSAAARP BACU012936/1-801 CAYFHEEERE GLAKICRLAI HSRYEDFVVD GFNVLYNKTP VIYLSAAARP 201 250 ENSP00000379691/1-788 GLGQYLCNQL GLPFPCLCRV PCNTVFGSQH QMDVAFLEKL IKDDIERGRL ENSBTAP00000043763/1-787 GLGQYLCNQL GLPFPCLCRV PCNTVFGSQH QMDVAFLEKL IKDDIERGKL ENSTTRP00000009700/1-784 GLGQYLCNQL GLPFPCLCRV PCNTMFGSQH QMDVAFLEKL IKDDIERGKL bmy_05428T0/1-786 GLGQYLCNQL GLPFPCLCRV PCNTMFGSQH QMDVAFLEKL IKDDIERGKL BACU012936/1-801 GLGQYLCNQL GLPFPCLCRV PCNTMFGSQH QMDVAFLEKL IKDDIERGKL 251 300 ENSP00000379691/1-788 PLLLVANAGT AAVGHTDKIG RLKELCEQYG IWLHVEGVNL ATLALGYVSS ENSBTAP00000043763/1-787 PLLLVANAGT AAVGHTDKIG RLKEVCEQYG IWLHVEGVNL ATLALGYVSS ENSTTRP00000009700/1-784 PLLLVANAGT AAVGHTDKIG RLKELCEQYG IWLHVKGVNL ATLALGYVSS bmy_05428T0/1-786 PLLLVANAGT AAVGHTDKIG RLKELCEQYG IWLHVKGVNL ATLALGYVSS BACU012936/1-801 PLLLVANAGT AAVGHTDKIG RLKELCEQYG IWLHVKGVNL ATLALGYVSS 301 350 ENSP00000379691/1-788 SVLAAAKCDS MTMTPGPWLG LPAVPAVTLY KHDDPALTLV AGLTSNKPTD ENSBTAP00000043763/1-787 SVLAATKCDS MTLTPGPWLG LPAVPAVTLY KHDDPALTLV SGLTSNKPAD ENSTTRP00000009700/1-784 SVLAATKCDS MTLTPGPWLG LPAVPAVTLY KHDDPALTLV AGLTSNKPTD bmy_05428T0/1-786 SVLAATKCDS MTLTPGPWLG LPAVPAVTLY KHDDPALTLV AGLTSNKPTD BACU012936/1-801 SVLAATKCDS MTLTPGPWLG LPAVPAVTLY KHDDPALTLV AGLTSNKPTD 351 400 ENSP00000379691/1-788 KLRALPLWLS LQYLGLDGFV ERIKHACQLS QRLQESLKKV NYIKILVEDE ENSBTAP00000043763/1-787 KLRALPLWLS LQYLGLDGIV ERIKHACQLS QRLQESLKKV NHIKILVEDE ENSTTRP00000009700/1-784 KLRALPLWLS LQYLGLDGIV ERIKHACQLS QRLQESLKKV NHVKILVEDE bmy_05428T0/1-786 KLRALPLWLS LQYLGLDGIV ERIKHACQLS QRLQESLKKV NHIKILVEDE BACU012936/1-801 KLRALPLWLS LQYLGLDGIV ERIKHACQLS QRLQESLKKV NHIKILVEDE 401 450 ENSP00000379691/1-788 LSSPVVVFRF FQELPGSDPV FKAVPVPNMT PSGVGRERHS CDALNRWLGE ENSBTAP00000043763/1-787 LSSPVVVFRF FQELPGSDPG LNAIPAPSAA ASAVGRERHS CDALNRWLGE ENSTTRP00000009700/1-784 LSSPVVVFRF FQELPGSDPG LNAIPAPNMT PSAVSQERHS CDSLNRWLGE bmy_05428T0/1-786 LSSPVVVFRF FQELPGSDPG LNAIPAPNMA PSAVSQERHS CDALNRWLGE BACU012936/1-801 LSSPVVVFRF FQELSGSDPG LNAIPAPNMA PSAVSQERPS CDAVNRWLGE 451 500 ENSP00000379691/1-788 QLKQLVPASG LTVMDLEAEG TCLRFSPLMT AAVLGTRGED VDQLVACIES ENSBTAP00000043763/1-787 QLKQLVPMSG LTVMDLEVEG TCVRFSPLMT AAVLGTRGED VDQLVACVQS ENSTTRP00000009700/1-784 QLKQLVPASG LTVMDLEVEG TCVRFSPLTT AAVLGTRGED VDQLVACIQS bmy_05428T0/1-786 QLKQLVPASG LTVVDLEVEG TCVRFSPLTT AAVLGTRGED VDQLAACIQS BACU012936/1-801 QLKQLVPASG LTVVDLEVEG TCVRFSPLTT AAVLGTRGED VDQLAACIQS 501 550 ENSP00000379691/1-788 KLPVLCCTLQ LREEFKQEVE ATAGLLYVDD PNWSGIGVVR YEHANDDKSS ENSBTAP00000043763/1-787 KLPVLTCTLQ LREEFKQEVE ATAGLLYVDD PNWPGIGVVR YEHANDDKSS ENSTTRP00000009700/1-784 QLPVLTCTLQ LREEFKQEVM GTAGLLYVDD PNWPGIGVVR YEHANDDKSS bmy_05428T0/1-786 KLPVLTCTLQ LREEFKQEVT GTAGLLYVDD PSWPGIGVVR YEHANDDKSS BACU012936/1-801 KLPVLTCTLQ LREEFKQEVT GTAGLLYVDD PNWPGIGVVR YEHANDDKSS 551 600 ENSP00000379691/1-788 LKSDPEGENI HAGLLKKLNE LESDLTFKIG PEYKSMKSCL YVGMASDNVD ENSBTAP00000043763/1-787 LKLDPEGEKI HAGLLKKLNE LESDLTFKMG PEYKSMKSCI YIGMASDDID ENSTTRP00000009700/1-784 LKSDPEGEKI HAGLLKKLNE LESDLTFKMG PEYKSMKSCI YIGMASDDID bmy_05428T0/1-786 LKSDPEGEKI HAGLLKKLNE LESDLTFKMG PEYKSMKSCI YIGMASDDID BACU012936/1-801 LKSDPEGEKI HAGLLKKLNE LESDLTFKMG PEYKSMKSCI YIGMASDDID 601 650 ENSP00000379691/1-788 AAELVETIAA TAREIEENSR LLENMTEVVR KGIQEAQVEL QKASEERLLE ENSBTAP00000043763/1-787 ISELVETIAV TAREIEEDSR LLENMTEVVR KGIQEAQVQL QKANEERLLE ENSTTRP00000009700/1-784 VSELVETIAV TAREIEENSR LLENMTEVVR KGIQEAQVQL QKANEERLLE bmy_05428T0/1-786 VSELVETIAV TAREIEENSR LLENMTEVVR KGIQEAQVQL QKANEERLLE BACU012936/1-801 VSELVETIAV TAREIEENSR LLENMTEVVR KGIQEAQVQL QKANEERLLE 651 700 ENSP00000379691/1-788 EGVLRQIPVV GSVLNWFSPV QALQKGRTFN LTAGSLESTE PIYVYKAQGA ENSBTAP00000043763/1-787 EGVLRQIPVV GSVLNWFSPV QASQKGRTFN LTAGSLESTE HTYVYKVQGS ENSTTRP00000009700/1-784 EGVLRQIPVV GSVLNWFSPV QASQKGRTFN LTAGSLEFTE HTYVYKVQAR bmy_05428T0/1-786 EGVLRQIPVV GSVLNWFSPV QASQKGRTFN LTAGSLESTE HTYVYKVQGS BACU012936/1-801 EGVLRQIPVV GSVLNWFSPV QASQKGRTFN LTAGSLESTE HTYVYKVQGS 701 750 ENSP00000379691/1-788 GVTLPPTPSG SRTKQRLPGQ KPFKRSLRGS DALSETSSVS HIEDLEKVER ENSBTAP00000043763/1-787 GVTPPQTPTG TRTKQRLPGQ KPFKRSLRGS DAISETSSVG HIEDLEKMEQ ENSTTRP00000009700/1-784 EVTSPSTPSV ARTKQRLPGQ KPFKRSLRGS DAVSETSSVS HIEDLEKIEH bmy_05428T0/1-786 GVTPPQTPSG ARTKQRLPGQ KPFKRSLRGS DAVSETSSVS HIEDLEKMEH BACU012936/1-801 GVTPPQTPSG ARTKQRLPGQ KPFKRSLRGS DAVSETSSVS HIEDLEKMEH 751 800 ENSP00000379691/1-788 LSSGPEQITL EASSTEGHPG APSPQHTDQT EAFQKGVPHP EDDHSQVEGP ENSBTAP00000043763/1-787 SSGGQE--AS EANSHERHPE APAPPEAEPP GALQDGAQGL QDDRPQVEEP ENSTTRP00000009700/1-784 LSGGQD--AS EANSPEWHPG VPTPPEAEQT GALQDRAQRL EDDCPQVEEP bmy_05428T0/1-786 LSGGQD--AS EANSPERHPG VPTPPEAEQT GALQDRAQRL EDDRPQVEEP BACU012936/1-801 LSGGQD--AS EANSPERHPG APTPPEAEQT GALQDRAQRL EDDRPQVEEP 801 850 ENSP00000379691/1-788 ESLR ENSBTAP00000043763/1-787 ESLR ENSTTRP00000009700/1-784 ESLR bmy_05428T0/1-786 ESLR BACU012936/1-801 ESLR