KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:23 2014 Check: 00 .. Name: ENSP00000294179/1-355 Len: 417 Check: 8229 Weight: 1.00 Name: ENSTTRP00000002327/1-355 Len: 417 Check: 7817 Weight: 1.00 Name: ENSBTAP00000043848/1-355 Len: 417 Check: 6950 Weight: 1.00 Name: BACU005359/1-417 Len: 417 Check: 4075 Weight: 1.00 Name: bmy_20662T0/1-303 Len: 417 Check: 6995 Weight: 1.00 // 1 50 ENSP00000294179/1-355 MIPRKRYGSK NTDQGVYLGL SKTQVLSPAT AGSSSSDIAP LPPPVTLVPP ENSTTRP00000002327/1-355 MIPRKRYGSK NTDQGVYLGL SKTQVLSPAT AGTSSSDIAP LPPRVALVPP ENSBTAP00000043848/1-355 MIPRKRYGSK NTDQGVYLGL SKTQVLSPAT AGSSSSDIAP LPPPVALVPP BACU005359/1-417 MIPRKRYGSK NTDQGVYLGL SKTQVLSPAT AGSSSSDIAP LPPPVALVPP bmy_20662T0/1-303 MIPRKRYGSK NTDQGVYLGL SKTQVLSPAT AGSSSSDIAP LPPPVALVPP 51 100 ENSP00000294179/1-355 PPDTMSCRDR TQEFLSACKS LQTRQNGIQT NKPALRAVRQ RSEFTLMAKR ENSTTRP00000002327/1-355 LPDTMSCRDR TQEFLSACKS LQSRQNGIQT NKPTLRAVRQ RSEFTLMAKR ENSBTAP00000043848/1-355 PPDTMSCRDR TQEFLSACKS LQSRQNGIQA NKPALRAVRQ RSEFTLMAKR BACU005359/1-417 PPDTMSCRDR TQEFLSACKS LQSRQNGIQT NKPALRAVRQ RSEFTLMAKR bmy_20662T0/1-303 PPDTMSCRDR TQEFLSACKS LQSRQNGIQT NKPALRAVRQ RSEFTLMAKR 101 150 ENSP00000294179/1-355 IGKDLSNTFA KLEKLTILAK RKSLFDDKAV EIEELTYIIK ---------- ENSTTRP00000002327/1-355 IGKDLSNTFA KLEKLTILAK RKSLFDDKAV EIEELTYIIK ---------- ENSBTAP00000043848/1-355 IGKDLSNTFA KLEKLTILAK RKSLFDDKAV EIEELTYIIK ---------- BACU005359/1-417 IGKDLSNTFA KLEKLTILAK RKSLFDDKAV EIEELTYIIK QGLSLSKLQS bmy_20662T0/1-303 IGKDLSNTFA KLEKLTILAK RKSLFDDKAV EIEELTYIIK ---------- 151 200 ENSP00000294179/1-355 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002327/1-355 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043848/1-355 ---------- ---------- ---------- ---------- ---------- BACU005359/1-417 LDYPSRPFWS VQDTITPANN VHPAIPARDV HVGDTLAEDP MVDTQFFCWL bmy_20662T0/1-303 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000294179/1-355 --QDINSLNK QIAQLQDFVR AKGSQSGRHL QTHSNTIVVS LQSKLASMSN ENSTTRP00000002327/1-355 --QDINSLNK QIAQLQDFVR AKGSQSGRHL QTHSNTIVVS LQSKLASMSN ENSBTAP00000043848/1-355 --QDINSLNK QIAQLQDFVR AKGSQSGRHL QTHSNTIVVS LQSKLASMSN BACU005359/1-417 FHQDINSLNK QIAQLQDFVR AKGSQSGRHL QTHSNTIVVS LQSKLASMSN bmy_20662T0/1-303 --QDINSLNK QIAQLQDFVR AKGSQSGRHL QTHSNTIVVS LQSKLASMSN 251 300 ENSP00000294179/1-355 DFKSVLEVRT ENLKQQRSRR EQFSRAPVSA LPLAPNHLGG GAVVLGAESH ENSTTRP00000002327/1-355 DFKSVLEVRT ENLKQQRSRR EQFSRAPVSA LPLAPNHLGG GAVVLGAESR ENSBTAP00000043848/1-355 DFKSVLEVRT ENLKQQRSRR EQFSRAPVSA LPLAPNHLGG GAVVLGAESR BACU005359/1-417 DFKSVLEVRT ENLKQQRSRR EQFSRAPVSA LPLAPNHLGG GAVVLGAESR bmy_20662T0/1-303 DFKSVLEVRT ENLKQQRSRR EQFSRAPVSA LPLAPNHLGG GAVVLGAESR 301 350 ENSP00000294179/1-355 ASKDVAIDMM DSRTSQQLQL IDEQDSYIQS RADTMQNIES TIVELGSIFQ ENSTTRP00000002327/1-355 ASGDVAIDMM DSRTSQQLQL IDEQDSYIQS RADTMQNIES TIVELGSIFQ ENSBTAP00000043848/1-355 ASGDVAIDMM DSRTSQQLQL IDEQDSYIQS RADTMQNIES TIVELGSIFQ BACU005359/1-417 ASGDVAINMM DSRTSQQLQL IDEQDSYIQS RADTMQNIES TIVELGSIFQ bmy_20662T0/1-303 ASGDVAINMM DSRTSQQLQL IDEQDSYIQS RADTMQNIES TIVELGSIFQ 351 400 ENSP00000294179/1-355 QLAHMVKEQE ETIQRIDENV LGAQLDVEAA HSEILKYFQS VTSNRWLMVK ENSTTRP00000002327/1-355 QLAHMVKEQE ETIQRIDENV LGAQLDVEAA HSEILKYFQS VTSNRWLMVK ENSBTAP00000043848/1-355 QLAHMVKEQE ETIQRIDENV LGAQLDVEAA HSEILKYFQS VTSNRWLMVK BACU005359/1-417 QLAHMVKEQE ETIQRIDENV LGAQLDVEAA HSEILKYFQS VTSNRWLMVK bmy_20662T0/1-303 QLAHMVKEQE ETIQR----- ---------- ---------- ---------- 401 450 ENSP00000294179/1-355 IFLILIVFFI IFVVFLA ENSTTRP00000002327/1-355 IFLILIVFFI IFVVFLA ENSBTAP00000043848/1-355 IFLILIVFFI IFVVFLA BACU005359/1-417 IFLILIVFFI IFVVFLA bmy_20662T0/1-303 ---------- -------