KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:55:24 2014 Check: 00 .. Name: bmy_13472T0/1-800 Len: 831 Check: 4596 Weight: 1.00 Name: ENSBTAP00000043854/1-726 Len: 831 Check: 1446 Weight: 1.00 Name: BACU020372/1-724 Len: 831 Check: 7092 Weight: 1.00 Name: ENSTTRP00000015031/1-724 Len: 831 Check: 7132 Weight: 1.00 // 1 50 bmy_13472T0/1-800 -----MQSSL SPRWGSSGWE SGITREISGG LIFEGGFVVL DLSGPDAALS ENSBTAP00000043854/1-726 ---------- -------MPD SRAAPQES-- ---------- LLDASLGTTQ BACU020372/1-724 VPCTSGAGRS CPPQDPSMPD SRVAPQES-- ---------- RLDASLGTTQ ENSTTRP00000015031/1-724 VPCTSGAGRS CPPQDPSMPD SRVTPQES-- ---------- RLDASLRTTQ 51 100 bmy_13472T0/1-800 GNTGTSSLRF SLSPRTKGPL GTTLGWHDPS C---GLPDPA EEALWTTQAD ENSBTAP00000043854/1-726 ENVGTSSLT- DGQTLSKEPL SHALKLSTPE KVKDAQLNPP EEALWTTRAD BACU020372/1-724 EHLGTSSLT- DGHTLSKEPL SHALKLSSPA KVKDAQLNSP EEVLWTTRAD ENSTTRP00000015031/1-724 GHLGTSSLT- DGHTLSKEPL SHALKLSSPV KVKDAQMNSP EEALWTTRAD 101 150 bmy_13472T0/1-800 GRVHLRIDPS CPQTPYTVHR MFYEALDKYG DLSALGFKRQ GMWEHISYNQ ENSBTAP00000043854/1-726 GRVRLRIDPI CSQTPRTVHQ MFSTTLDKYG DLSAMGFKRQ GTWEHISYTQ BACU020372/1-724 GRVHLRIDPS CPQTPYTVHR MFYEALDKYG DLSALGFKRQ GMWEHISYNQ ENSTTRP00000015031/1-724 GRVHLRIDPS CPQTPYTVHR MFCEALDKYG DLSALGFKRQ GMWEHISYNQ 151 200 bmy_13472T0/1-800 YYLLARKAAK GFLKLGLERA HSVAILGFNS PEWFFSAVGT VFAGGIVTGI ENSBTAP00000043854/1-726 YYLLARKAAK GFLKLGLERA HSVAILAFNS PEWFFSAVGA VFGGGIITGI BACU020372/1-724 YYLLARKAAK GFLKLGLEWA HSVAILGFNS PEWFFSAVGT VFAGGIVTGI ENSTTRP00000015031/1-724 YYLLARKAAK GFLKLGLERA HSVAILGFNS PEWFFSAVGT VFAGGIVTGI 201 250 bmy_13472T0/1-800 YTTSSPEACQ YIAHDCRANI IVVDTQKQLE KILKIWKNLP HLKAVVIFQE ENSBTAP00000043854/1-726 YTTSSPEACQ YIAYDCRANI IVVDTQKQLE KILKIWKHLP HLKAVVIYRE BACU020372/1-724 YTTSSPEACQ YIAHDCRANI IVVDTQKQLE KILKIWKNLP HLKAVVIFQE ENSTTRP00000015031/1-724 YTTSSPEACR YIAHDCRANI IVVDTQKQLE KILKIWKNLP HLKAVVIFQE 251 300 bmy_13472T0/1-800 PPLTKMANVY TMEEFMDLGN EVTEEALDTI INAQQPNQCC VLVYTSGTTG ENSBTAP00000043854/1-726 APPMRMPSVY TMEELMELGN EVPEEALDVI INAQKPNQCC ALVYTSGTTG BACU020372/1-724 PPLTKMTNVY TMEEFMDLGN EVTEEALDAI INAQQPNQCC VLVYTSGTTG ENSTTRP00000015031/1-724 PPPTKMANVY TMEEFMDLGN EVTEEALDTI INAQQPNQCC VLVYTSGTTG 301 350 bmy_13472T0/1-800 NPKGVMLSQD NITWTAHYGS QAGDIQPAEV QQEVVVSYLP LSHIAAQIYD ENSBTAP00000043854/1-726 NPKGVMLSQD NITWTARYGS QAGDIQPAEI QQEVVVSYLP LSHIAAQIYD BACU020372/1-724 NPKGVMLSQD NITWTAHYGS QAGDIQPAEV QQEVVVSYLP LSHIAAQIYD ENSTTRP00000015031/1-724 NPKGVMLSQD NITWTAHYGS QAGDIQPAEV QQEVVVSYLP LSHIAAQIYD 351 400 bmy_13472T0/1-800 LWTGIQWGAQ VCFAETDALK GSLVNTLREV EPTSHMGVPR VWEKIMERIQ ENSBTAP00000043854/1-726 LWTGIQWGAQ VCFAEPDALK GSLVNTLREV EPTSHMGVPR VWEKIMEQIQ BACU020372/1-724 LWTGIQWGAQ VCFAETDALK GSLVNTLREV EPTSHMGVPR VWEKIMERIQ ENSTTRP00000015031/1-724 LWTGIQWGAQ VCFAETDALK GSLVNTLREV EPTSHMGVPR VWEKIMERIQ 401 450 bmy_13472T0/1-800 EVAAQSGFIR RKMLLWAMSV TLEQNLTCPS SDLKPFTTRL ADYLVLAKVR ENSBTAP00000043854/1-726 EVAAQSGFIW RKMLLWAMSV TLEQNLTCPS SDLKPFTTRL ADYLVLAKVR BACU020372/1-724 EVAAQSGFIR RKMLLWAMSV TLEQNLTCPS SDLKPFTTRL ADYLVLAKVR ENSTTRP00000015031/1-724 EVAAQSGFIR RKMLLWAMSV TLEQNLTCPS SDLKPFTTRL ADYLVLAKVR 451 500 bmy_13472T0/1-800 HALGFAKCQK NFYGGAPMTA ETQHFFLGLN IRLYAGYGLS ETSGPHFMSS ENSBTAP00000043854/1-726 QALGFAKCQK NFYGAAPMTA ETQHFFLGLN IRLYAGYGLS ETSGPHFMSS BACU020372/1-724 QALGFAKCQK NFYGGAPMTA ETQHFFLGLN IRLYAGYGLS ETSGPHFMSS ENSTTRP00000015031/1-724 QALGFAKCQK NFYGGAPMTA ETQHFFLGLN IRLYAGYGLS ETSGPHFMSS 501 550 bmy_13472T0/1-800 PYNYRLYSSG KVVPGCRVKL VNEDAEGIGE ICLWGRTIFM GYLNMEDKTC ENSBTAP00000043854/1-726 PYNYRLYSSG KVVPGCQVKL VNEDAEGIGE ICLWGRTIFM GYLNMEDKTC BACU020372/1-724 PYNYRLYSSG KVVPGCRVKL VNEDAEGIGE ICLWGRTIFM GYLNMEDKTC ENSTTRP00000015031/1-724 PYNYRLYSSG KVVPGCRVKL VNEDAEGIGE ICLWGRTIFM GYLNMEDKTC 551 600 bmy_13472T0/1-800 EAIDADGWLH TGDSGHLDAD GFLYITGRLK ---------- ---------- ENSBTAP00000043854/1-726 EAIDAEGWLH TGDTGRLDAD GFLYITGRLK ELIITAGGEN VPPVPIEEAV BACU020372/1-724 EAIDADGWLH TGDSGHLDAD GFLYITGRLK ELIITAGGEN VPPVPIEEAV ENSTTRP00000015031/1-724 EAIDADGWLH TGDSGHLDAD GFLYITGRLK ELIITAGGEN VPPVPIEEAV 601 650 bmy_13472T0/1-800 --ELPIISNA VLIGDQRKFL SMLLTLKCTL DPDTSDPTDN LTEQAVEFCQ ENSBTAP00000043854/1-726 KTELPIIRNA MLIGDQRKFL SMLLTLKCTL DPDTFEPTDN LTEQAVEFCQ BACU020372/1-724 KTELPIISNA VLIGDQRKFL SMLLTLKCTL DPDTSDPTDN LTEQAVEFCQ ENSTTRP00000015031/1-724 KTELPIISNA VLIGDQRKFL SMLLTLKCTL DPDTSDPTDN LTEQAVEFCQ 651 700 bmy_13472T0/1-800 RVGSKATTVS EVVGKKDEAV YQAIEEGIQR VNMNAAARPY HIQKWAVLER ENSBTAP00000043854/1-726 RVGSKATTVS EVVGKKDEAV YQAIEEGIQR VNMNAAARPY HIQKWAILEK BACU020372/1-724 RVGSKATTVS EVVGKKDEAV YQAIEEGIQR VNMNAAARPY HIQKWAVLER ENSTTRP00000015031/1-724 RVGSKAATVS EVVGKKDEAV YQAIEEGIQR VNMNAAARPY HIQKWAVLER 701 750 bmy_13472T0/1-800 DFSILGGELE PEKASGVASV GWMKSLLAVA SWGVHGIAGS HNEAETAHSP ENSBTAP00000043854/1-726 DFSISGGELG P--------- ---------- ---------- ---------- BACU020372/1-724 DFSILGGELG P--------- ---------- ---------- ---------- ENSTTRP00000015031/1-724 DFSISGGELG P--------- ---------- ---------- ---------- 751 800 bmy_13472T0/1-800 REVQRYHRL- LLPRAKKVIR GRPSQVSPED GRLSIFLTPR SSSVWAHGLL ENSBTAP00000043854/1-726 --TMKLKRLA VLEKYKDVI- ---DSFYQEQ KSKQGSSLPG FSLRWQTGAS BACU020372/1-724 --TMKLKRLT VLEKYKDII- ---DCFYQEQ KK-------- ---------- ENSTTRP00000015031/1-724 --TMKLKRLT VLEKYKDII- ---DSFYQEQ KK-------- ---------- 801 850 bmy_13472T0/1-800 ASLLGSLGQN CQQVPDFFVN RAADQSRVVV I ENSBTAP00000043854/1-726 S--------- ---------- ---------- - BACU020372/1-724 ---------- ---------- ---------- - ENSTTRP00000015031/1-724 ---------- ---------- ---------- -