KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:26 2014 Check: 00 .. Name: ENSTTRP00000014610/1-1096 Len: 1133 Check: 4649 Weight: 1.00 Name: bmy_19517T0/1-649 Len: 1133 Check: 9867 Weight: 1.00 Name: ENSP00000379822/1-1099 Len: 1133 Check: 9402 Weight: 1.00 Name: BACU003225/1-1028 Len: 1133 Check: 9923 Weight: 1.00 Name: ENSBTAP00000043868/1-1113 Len: 1133 Check: 6268 Weight: 1.00 // 1 50 ENSTTRP00000014610/1-1096 MSLNNSSNVF LDSAPSNANR FQVNVINESH ESSVAANDNT DPPHYEETSF bmy_19517T0/1-649 ---------- ---------- ---------- ---------- ---------- ENSP00000379822/1-1099 MSLNNSSNVF LDSVPSNTNR FQVSVINENH ESSAAADDNT DPPHYEETSF BACU003225/1-1028 MSLNNSSNVF LDSAPGNTNR FQVNVINESH ESSVAVNDNA DPPHYEETSF ENSBTAP00000043868/1-1113 ---------- --------NR FQVNVINESH ESSAAMNDNA DPPHYEETSF 51 100 ENSTTRP00000014610/1-1096 GDEGQNRFRI SFRPGNQDRY DNFLQTGETA KTDASFHAYD SHTNTYYLQT bmy_19517T0/1-649 ---------- ---------- ---------- ---------- ---------- ENSP00000379822/1-1099 GDEAQKRLRI SFRPGNQECY DNFLQSGETA KTDASFHAYD SHTNTYYLQT BACU003225/1-1028 GDEGQNRFRI SFRPGNQDRY DNFLQTGETA KTDASFHAYD SHTNTYYLQT ENSBTAP00000043868/1-1113 GDEGQNRFRI SFRPGNQECY DNFLQTGETA KTDASFHAYD SHTNTYYLQT 101 150 ENSTTRP00000014610/1-1096 FGHNTMDAVP KIEYYRNTGS ISGPKVNRPS LLEIHEQLAK NVSVAPGSAD bmy_19517T0/1-649 ---------- ---------- ---------- ---------- ---------- ENSP00000379822/1-1099 FGHNTMDAVP KIEYYRNTGS ISGPKVNRPS LLEIHEQLAK NVAVTPSSAD BACU003225/1-1028 FGHNTMDAVP KIEYYRNTGS VSGPKVNRPS LLEIHEQLAK NVSVAPGSAD ENSBTAP00000043868/1-1113 FGHNTVDAVP KIEYYRNTGS VSGPKVNRPS LLDIHEQLAK NVSVAPGSAD 151 200 ENSTTRP00000014610/1-1096 VVANGDGMPG DEQAENKEED QAGAVKFGWV KGVLVRCMLN IWGVMLFIRL bmy_19517T0/1-649 ---------- ---------- ---------- ---------- ---------- ENSP00000379822/1-1099 RVANGDGIPG DEQAENKEDD QAGVVKFGWV KGVLVRCMLN IWGVMLFIRL BACU003225/1-1028 MVANGDGMPG DEQAENKEED QAGVVKFGWV KGVLVRCMLN IWGVMLFIRL ENSBTAP00000043868/1-1113 VVANGEGTPG DEQAENKGED QAGAVKFGWV KGVLVRCMLN IWGVMLFIRL 201 250 ENSTTRP00000014610/1-1096 SWIVGEAGI- ---------- ---------- ---------- -GLGVIIIGL bmy_19517T0/1-649 ---------- ---------- ---------- ---------- ---------- ENSP00000379822/1-1099 SWIVGEAGI- ---------- ---------- ---------- -GLGVIIIGL BACU003225/1-1028 SWIVGEAGIG LGVIIILLST MVTSITGLST SAIATNGFVR GGLGVIIIGL ENSBTAP00000043868/1-1113 SWIVGEAGIG LGVLIILLST MVTSITGLST SAIATNGFVR GGLGVIIIGL 251 300 ENSTTRP00000014610/1-1096 SVVVTTLTGI SMSAICTNGV VRGGGAYYLI SRSLGPEFGG SIGLIFAFAN bmy_19517T0/1-649 ---------- ---------- ---------- ---------- ---------- ENSP00000379822/1-1099 SVVVTTLTGI SMSAICTNGV VRGGGAYYLI SRSLGPEFGG SIGLIFAFAN BACU003225/1-1028 SVVVTTLTGI SMSAICTNGV VRGGGAYYLI SRSLGPEFGG SIGLIFAFAN ENSBTAP00000043868/1-1113 SVVVTTLTGI SMSAICTNGV VRGGGAYYLI SRSLGPEFGG SIGLIFAFAN 301 350 ENSTTRP00000014610/1-1096 AVAVAMYVVG FAETVVDLLK ESDSMMVDPT NDIRIIGSIT VVILLGISVA bmy_19517T0/1-649 ---------- ---------- ---------- ---------- ---------- ENSP00000379822/1-1099 AVAVAMYVVG FAETVVDLLK ESDSMMVDPT NDIRIIGSIT VVILLGISVA BACU003225/1-1028 AVAVAMYVVG FAETVVDLLK ESNSMMVDPT NDIRIIGSIT VVILLGISVA ENSBTAP00000043868/1-1113 AVAVAMYVVG FAETVVDLLK ETDSMMVDPT NDIRIIGSIT VVILLGISVA 351 400 ENSTTRP00000014610/1-1096 GMEWEAKAQV ILLIILLIAI AN-FIGTVIP SNNEKKSRGF F-YQASIFAE bmy_19517T0/1-649 ---------- ---------- ---------- ---------- ---------- ENSP00000379822/1-1099 GMEWEAKAQV ILLVILLIAI ANFFIGTVIP SNNEKKSRGF FNYQASIFAE BACU003225/1-1028 GMEWEAKAQV ILLIILLIAI VNFFIGTVIP SNNDKKSRGF FNYQASIFAE ENSBTAP00000043868/1-1113 GMEWEAKAQV ILLIILLIAI ANFFIGTVIP SNNEKRARGF FNYQASIFAE 401 450 ENSTTRP00000014610/1-1096 NFGPSFTKGE GFFSVFAIFF PAATGILAGA NISGDLEDPQ DAIPRGTMLA bmy_19517T0/1-649 ---------- ---------- ---------- ---------- -------MLA ENSP00000379822/1-1099 NFGPRFTKGE GFFSVFAIFF PAATGILAGA NISGDLEDPQ DAIPRGTMLA BACU003225/1-1028 NFGPSFTKGE GFFSVFAIFF PAATGILAGA NISGDLEDPQ DAIPRGTMLA ENSBTAP00000043868/1-1113 NFGPSFTKGE GFFSVFAIFF PAATGILAGA NISGDLEDPQ DAIPKGTMLA 451 500 ENSTTRP00000014610/1-1096 IFITTVAYIG VAICV--XXX XXXXXXGSVN DTIISGMNCN GTAACGLGYD bmy_19517T0/1-649 IFITTVAYIG VAICV--GAC VVRDATGSMN DTVISGMNCN GSAACGLGYD ENSP00000379822/1-1099 IFITTVAYLG VAICV--GAC VVRDATGNMN DTIISGMNCN GSAACGLGYD BACU003225/1-1028 IFITTVAYIG VAICVVSSGC IV-------- ---------- ---------- ENSBTAP00000043868/1-1113 IFITTVAYLG VAICV--GAC VVRDATGSVN DTIISGMNCN GSAACGLGYD 501 550 ENSTTRP00000014610/1-1096 FSRCRHEPCQ YGLMNNFQVM SMVSGFGPLI TAGIFSATLS SALASLVSAP bmy_19517T0/1-649 FSRCRHEPCQ YGLMNNFQVM SMVSGFGPLI TAGIFSATLS SALASLVSAP ENSP00000379822/1-1099 FSRCRHEPCQ YGLMNNFQVM SMVSGFGPLI TAGIFSATLS SALASLVSAP BACU003225/1-1028 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043868/1-1113 FSRCRHEPCQ YGLMNNFQVM SMVSGFGPLI TAGIFSATLS SALASLVSAP 551 600 ENSTTRP00000014610/1-1096 KVFQALCKDN IYKALQFFAK GYGKNNEPLR GYFLTFVIAM AFILIAELNT bmy_19517T0/1-649 KVFQALCKDN IYKALQFFAK GYGKNNEPLR GYFLTFVIAM AFILIAELNT ENSP00000379822/1-1099 KVFQALCKDN IYKALQFFAK GYGKNNEPLR GYILTFLIAM AFILIAELNT BACU003225/1-1028 ----ALCKDN IYKALQFFAK GYGKNNEPLR GYLLTFVIAM AFILIAELNT ENSBTAP00000043868/1-1113 KVFQALCKDN IYKALQFFAK GYGKNNEPLR GYFLTFVIAM AFILIAELNT 601 650 ENSTTRP00000014610/1-1096 IAPIISNFFL ASYALINFSC FHASYAKSPX XXXXXXXXXX XXXXXXXXXX bmy_19517T0/1-649 IAPIISNFFL ASYALINFSC FHASYAKSPV GGVIHFILD- -GDLHTVFTT ENSP00000379822/1-1099 IAPIISNFFL ASYALINFSC FHASYAKSPG WRPAYGIYNM WVSLFGAVLC BACU003225/1-1028 IAPIISNFFL ASYALINFSC FHASYAKSP- ---------- ---------- ENSBTAP00000043868/1-1113 IAPIISNFFL ASYALINFSC FHASYAKSPG WRPAYGIYNM WVSLFGAVLC 651 700 ENSTTRP00000014610/1-1096 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXVNWGSSTQ ALSYVSALDN bmy_19517T0/1-649 CGYLF----- -------LEL FCAVQSCLSS TDVNWGSSTQ ALSYVSALDN ENSP00000379822/1-1099 CAVMFVINWW AAVITYVIEF FLYVYVTCKK PDVNWGSSTQ ALSYVSALDN BACU003225/1-1028 --VMFVINWW AAVITYVIEF FLYIYVTYKK PDVNWGSSTQ ALSYVSALDN ENSBTAP00000043868/1-1113 CAVMFVINWW AAVITYVIEF FLYIYVTYKK PDVNWGSSTQ ALSYMSALDN 701 750 ENSTTRP00000014610/1-1096 ALELTTVEDH VKNFRPQCIV LTGGPMTRPA LLDITHAFTK NSGLCICCEV bmy_19517T0/1-649 ALELTTVEDH VKNFRPQCIV LTGGPMTRPA LLDITHAFTK NSGLCICCEV ENSP00000379822/1-1099 ALELTTVEDH VKNFRPQCIV LTGGPMTRPA LLDITHAFTK NSGLCICCEV BACU003225/1-1028 ALELTTVEDH VKNFRPQCIV LTGGPMTRPA LLDITHAFTK NSGLCICCEV ENSBTAP00000043868/1-1113 ALELTTVEDH VKNFRPQCIV LTGGPMTRPA LLDITHAFTK NSGLCICCEV 751 800 ENSTTRP00000014610/1-1096 FVGPRKLCVK EMNSGMAKKQ AWLIKNKIKA FYAAVAAYCF RDGVRSLLQA bmy_19517T0/1-649 FVGPRKLCVK EMNSGMAKKQ AWLIKNKIKA FYAAVAADCF RDGVRSLLQA ENSP00000379822/1-1099 FVGPRKLCVK EMNSGMAKKQ AWLIKNKIKA FYAAVAADCF RDGVRSLLQA BACU003225/1-1028 FVGPRKLCVK EMNSGMAKKQ AWLIKNKIKA FYAAVAADCF RDGVRSLLQA ENSBTAP00000043868/1-1113 FVGPRKLCVK EMNSGMAKKQ AWLIKNKIKA FYAAVAADCF RDGVRSLLQA 801 850 ENSTTRP00000014610/1-1096 SGLGRMKPNT LVIGYKKNWR KAPLTEIENY VGIIXXXXXX XXXXXXXXXX bmy_19517T0/1-649 SGLGRMKPNT LVIGYKKNWR KAPLTEIENY VGLIQ----- ---------- ENSP00000379822/1-1099 SGLGRMKPNT LVIGYKKNWR KAPLTEIENY VGIIHDAFDF EIGVVIVRIS BACU003225/1-1028 SGLGRMKPNT LVIGYKKNWR KAPLTEIENY VGIIHDAFDF EIGVVIVRIS ENSBTAP00000043868/1-1113 SGLGRMKPNT LVIGYKKNWR KAPLTEIENY VGIIHDAFDF EIGVVIVRIS 851 900 ENSTTRP00000014610/1-1096 XXXXXXXXXQ VQDELEKLEQ ERLALEATIK DNECEEESGG LRGLFKKAGK bmy_19517T0/1-649 ----VENVL- -RDELEKLEQ ERLALEATIK DNECEEESGG LRGLFKKAGK ENSP00000379822/1-1099 QGFDISQVLQ VQEELERLEQ ERLALEATIK DNECEEESGG IRGLFKKAGK BACU003225/1-1028 QGFDISQVLQ VQDELEKLEQ ERLALEATIK DNECEEESGG LRGLFKKAGK ENSBTAP00000043868/1-1113 QGFDISQVLQ VREELEKLEQ ERLALEATIK DNESEEGNGG IRGLFKKAGK 901 950 ENSTTRP00000014610/1-1096 LNITKPTPKK DSSINTIQSM HVGEINQKLV EASTQFKKKQ GKGTIDVWWL bmy_19517T0/1-649 LNITKPTPKK DSSINTIQSM HVGEINQKLV EASTQFKKKQ GKGTIDVWWL ENSP00000379822/1-1099 LNITKTTPKK DGSINTSQSM HVGEFNQKLV EASTQFKKKQ EKGTIDVWWL BACU003225/1-1028 LNITKPTPKK DSSINTIQSM HVGEINQKLV EASTQFKKKQ GKGTIDVWWL ENSBTAP00000043868/1-1113 LNITKPTPKK DSSINTIQSM HVGEFNQKLV EASTQFKKKQ GKGTIDVWWL 951 1000 ENSTTRP00000014610/1-1096 FDDGXXXXXX XXXXXXRKKW KDC-IRIYVG GKINRIEEEK ITMASLLSKF bmy_19517T0/1-649 FDDGGLTLLI PYILTLRKKW KDCKLRIYVG GKINRIEEEK ITMASLLSKF ENSP00000379822/1-1099 FDDGGLTLLI PYILTLRKKW KDCKLRIYVG GKINRIEEEK IVMASLLSKF BACU003225/1-1028 FDDGGLTLLI PYILTLRKKW RDCKLRIYVG GKINRIEEEK ITMASLLSKF ENSBTAP00000043868/1-1113 FDDGGLILLI PYILTLRKKW KDCKLRIYVG GKINRIEEEK IAMASLLSKF 1001 1050 ENSTTRP00000014610/1-1096 RIKFADIHVI GDINIKPNKE SWKFFEEMIE PYRLHESCKD LTTAEKLKRE bmy_19517T0/1-649 RIKFADIHVI GDINIKPNKE SWKFFEEMIE PYRLHESCKD LTTAEKLKRE ENSP00000379822/1-1099 RIKFADIHII GDINIRPNKE SWKVFEEMIE PYRLHESCKD LTTAEKLKRE BACU003225/1-1028 RIKFADIHVI GDINTKPNKE SWKFFEEMIE PYRLHESCKD LTTAEKLKRE ENSBTAP00000043868/1-1113 RIKFADIHVI GDINVKPNKE SWKVFEEMIE PYCLHESCKD LTTAEKLKRE 1051 1100 ENSTTRP00000014610/1-1096 TPWKITDAEL EAVKEKXXXX XXXNELLQEH SRAANLIVLS LPVARKGSIS bmy_19517T0/1-649 TPWKITDAEL EAVKEKSYRQ VRLNELLQEH SRAANLIVLS LPVARKGSIS ENSP00000379822/1-1099 TPWKITDAEL EAVKEKSYRQ VRLNELLQEH SRAANLIVLS LPVARKGSIS BACU003225/1-1028 TPWKITDAEL EAVKEKSYRQ VRLNELLQEH SRAANLIVLS LPVARKGSIS ENSBTAP00000043868/1-1113 TPWKITDAEL EAVKEKSYRQ VRLNELLQEH SRAANLIVLS LPVARKGSIS 1101 1150 ENSTTRP00000014610/1-1096 DWLYMAWLEI LTKNLPPVLL VRGNHKNVLT FYS bmy_19517T0/1-649 DWLYMAWLEI LTKNLPPVLL VRGNHKNVLT FYS ENSP00000379822/1-1099 DLLYMAWLEI LTKNLPPVLL VRGNHKNVLT FYS BACU003225/1-1028 DWLYMAWLEI LTKNLPPVLL VRGNHKNVLT FYS ENSBTAP00000043868/1-1113 DWLYMAWLEI LTKNLPPVLL VRGNHKNVLT FYS