KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:55:27 2014 Check: 00 .. Name: bmy_02324T0/1-274 Len: 318 Check: 2117 Weight: 1.00 Name: ENSBTAP00000043895/1-318 Len: 318 Check: 1048 Weight: 1.00 Name: ENSTTRP00000015437/1-300 Len: 318 Check: 8850 Weight: 1.00 Name: BACU003821/1-223 Len: 318 Check: 8132 Weight: 1.00 // 1 50 bmy_02324T0/1-274 MNRFGTRLMG ATATPP-PPP KARSNENLDK IDMSLDDIIK LNRKEGKKQN ENSBTAP00000043895/1-318 MNRFSTRLMG ATATPPPAPP KARSNENLDK IDMSLDDIIK LNRKEGKKQN ENSTTRP00000015437/1-300 ---------- -------PPP KARSKKNLDK IDMSLDDIIK -NRKEGKKQN BACU003821/1-223 MNRFGTRLMG ATATPPPPPP KARSNENLDK IDMSLDDIIK LNRKEGKKQN 51 100 bmy_02324T0/1-274 FPRLNRRLQQ SGVRQFRMRV RWGIQQNSEN ---------- ---------- ENSBTAP00000043895/1-318 FPRLNRRLQQ SSARQFRMRV RWGIQQNSGF GKNSLSRRGR VMPGKRRPYG ENSTTRP00000015437/1-300 FPRLNRRLQQ SGARQFRMRV RWGIQQNSGF GKNSLSRRGR VMPGKRRPYG BACU003821/1-223 FPRLNRRLQQ SGARQFRMRV RWGIQQNSGF GKNSLSHRGR VMPGKRRPYG 101 150 bmy_02324T0/1-274 ---------- ---------- ---PSNLRNI ERYFPALKRK ANLLRQNEVQ ENSBTAP00000043895/1-318 VITGLAARKA TGIRKGISPM NRPPLSDKNI ERYFPALKRK ANLLRQNEVQ ENSTTRP00000015437/1-300 VITGLAARKA TGIRKGISPM NRPPLSDKNI ERYFPALKRK ANLLRQNEVQ BACU003821/1-223 VITGLAARKA TGIRKGISPM NRPPLSD--- ---------- ---------- 151 200 bmy_02324T0/1-274 RKPVAALKRP NQLNRKNNIP ANFTRSGNKL SHQKDTRQAT FLFRRGLKVQ ENSBTAP00000043895/1-318 RKPVAALKRP NQLNRKNNIP NNFTRSGNKL SHQKDTRQAT FLFRRGLKVQ ENSTTRP00000015437/1-300 RKPVAALKRP NQLNRKNNIP ANFTRSGNKL SHQKDTRQAT FLFRRGLKVQ BACU003821/1-223 ---------- ---------- ---------- ---------- -------KVQ 201 250 bmy_02324T0/1-274 AQLNSEQLLD DVVAKRTRQW RTSTTNGGIL TVSIDNPGAV QCPVTQKPRL ENSBTAP00000043895/1-318 AQLNSEQLLD DVVAKRTRQW RTSTTNGGIL TVSIDNPGAV QCPVTQKPRL ENSTTRP00000015437/1-300 AQLNSEQLLD DVVAKRTRQW RTSTTNGGIL TVSIDNPGAV QCPVTQKPRL BACU003821/1-223 AQLNSEQLLD DVVAKRTRQ- ---------- ---------- ----TQKPRL 251 300 bmy_02324T0/1-274 TRTAVPSFLT KREQSDVKKV PKGVPLQFDI NSVGKQTGMT LNERFGILKE ENSBTAP00000043895/1-318 TRTAVPSFLT KRDQSDIKKV PKGVPLQFDI NSVGKQTGMT LNERFGILKE ENSTTRP00000015437/1-300 TRTAVPSFLT KREQSDVKKV PKGVPLQFDI NSVGKQTGMT LNERFGILKE BACU003821/1-223 TRTAVPSFLT KREQSDVKKV PKGVPLQFDI NSVGKQTGMT LNERFGILKE 301 350 bmy_02324T0/1-274 QRATLTFNKG GSRFVTVG ENSBTAP00000043895/1-318 QRATLTFNKG GSRFVTVG ENSTTRP00000015437/1-300 QRATLTFNKG GSRFVTVG BACU003821/1-223 QRATLTFNKG GSRFVTVG